AMCG00014348


Basic Information

Item Value
gene id AMCG00014348
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10241006 ~ 10256375 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014348
TGTTTTTTAGGTTCATGCAGCATGCTGGGAACAAAATGGCGTTAGCAAAATAAGGGGTACCGATCTAGgcCCCTTTTGAACTTGCTGCTCAAACGCCTGGAAAAACTGTGAATTGCCATTACCATGAAATCCAATATCAAACAATGGAAGCAGATGGTACTCATTGGTATGCTGGCATGGGTTCTTCTGTTCTTGGCACTATTTACCTATTTCATGGACTACCGCGTGGACGATCCAAATGCCACAGGCTCGATGTCCTACACAGAGACGCGGAGGCTGACCTCTATCCAGGGCAACAACCGGGTCATCATGGTCTCTCAACAAGAGGCTGCCGCCTCGGACCCCAACAGCCATAGCGACCTTTTCAATTACCACTATGTTAGTGAACAGGCTGCTGTTAACCTACAGTCCAAGCCTATACAAACACGGTACAGTCTCGAGACCAATGGGAAGAACACCAGGTCAAGAGATCGAAGAACGACACGGAGCAGCTCTGGTGGGATTTGGTTCGCTGCTGGTCAGCAACAAATGAGTCGGGACGACCGACACACCATGGAGAAACTGTACCCTGATGAGGATGATCCTGAAGAAATCAAGCAGGAGCCAATAACAAGAAGGAAATCTAGGTTGGGGAACTCGAGCCGCAGGAGGGAGAAGCTGCTGGATACTGTGGATGACTTGGAAGAATACTACTTTCTGAAATCCAAGTCGGTCATTTACAAACTGTGGAAAGGCAACGTGTCTTCAAAGATGCTCACGCCGCGGCTGCAGAAGGCCATGAAAGATTACCTTAATGCTAATAAGCACCACGTTAACTACAAAGGTAAAAGGAGGACTAGACTCAGTGGAGAAGAGGTTCTGTGTGAGCTGAAGAGCCAGATAAGGGTGCGCTCTCTGGATGGGACGGAGGCCCCCTTTTCCAGTCTGGGCTGGGACAAACTTGTTCCCAAGGTTTCCATCAACGAGCTCTATCCTTTAGGATTCAGAAGTTGTGCTGTGGTGACGTCGGCAGGGGCCATACTGAACTCTTCCTTGGGCAAAGAGATTGATTCTCACCAAGCAGTCCTGAGGTTCAACACTGCTCCAACAGAGGGGTATGAGATGGATGTAGGGAATAAGACCACAATACGCATTATTAATTCCCAGATTCTTGCTAATCCAAATCATCGATTTAATATCAGCACACTGTATAAAGATGTTACTTTGGTTGCCTGGGATCCTGCACCATATACTGTAAACCTTCACAAGTGGTACAAGAACCCTGATTACAACCTCTTCACACCGTATGTGGAATATAGAAAGAAGTACCCTCACCAGCCTTTTTATATTCTCCATCCCAAATTCATTTGGCAGCTCTGGGATGTAATTCAGGGAAATACTCATGAGAATATTCAGCCCAACCCTCCTTCTTCAGGGTTTATCGGGATTCTCATCATGATGTCTCTGTGTGATGAGGTTCACGTCTATGAGTACATCCCCTCCATCCGGCAGACGGACCTGTGCCACTATCACGAACGCTACTTTGATGCGGCCTGCACTCTCGGGGCCTACCACCCCCTGCTCTACGAGAAGATGCTGATACAGCGAATGAACACGGGGACAGACAAAGATCTCAAAAAGAAAGGCAAAGTGACCTTGCCTGGATTCAGTGCCATAAcctgtaaaacataaaattgtaTTCAAAGGTGAGTGTTCGGAACTAGTGCAATAATATTTCACTtgctaattaataataaatacttgaaaCAACTGCGATTGGTCAGATTAGGTTTGATAGTTAATTGGTGGATGTCCCAAGCATTCCactccactttttttttttttttttttttttttt

Function

GO: NA

KEGG:

id description
K00779 SIAT2, ST6GAL2; beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 2)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014348 True 1837 mRNA 0.46 6 10241006 10256375

Neighbor

gene id symbol gene type direction distance location
AMCG00014346 uxs1,LOC107721615,LOC107551074,LOC107676432 coding downstream 43255 10192629 ~ 10197751 (-)
AMCG00014341 fhl2,fhl2a,LOC107716797,LOC107676452,LOC107688730 coding downstream 197440 10027652 ~ 10043566 (-)
AMCG00014332 NA coding downstream 768747 9467324 ~ 9472259 (-)
AMCG00014333 inpp4a coding downstream 822770 9373456 ~ 9418236 (-)
AMCG00014331 NA coding downstream 873970 9358847 ~ 9367036 (-)
AMCG00014349 NA coding upstream 43628 10300003 ~ 10301361 (-)
AMCG00014347 NA coding upstream 61869 10318244 ~ 10328231 (-)
AMCG00014354 NA coding upstream 269238 10525613 ~ 10526969 (-)
AMCG00014353 NA coding upstream 395904 10652279 ~ 10708018 (-)
AMCG00014358 NA coding upstream 643633 10900008 ~ 10903196 (-)
G69427 NA non-coding downstream 186731 10053737 ~ 10054275 (-)
G69396 NA non-coding downstream 305608 9935175 ~ 9935398 (-)
G69394 NA non-coding downstream 323671 9916845 ~ 9917335 (-)
G69391 NA non-coding downstream 328985 9901357 ~ 9912021 (-)
G69382 NA non-coding downstream 345426 9894726 ~ 9895580 (-)
G69483 NA non-coding upstream 81512 10337887 ~ 10340946 (-)
G69495 NA non-coding upstream 163805 10420180 ~ 10479009 (-)
G69523 NA non-coding upstream 424695 10681070 ~ 10681292 (-)
G69528 NA non-coding upstream 483041 10739416 ~ 10739930 (-)
G69530 NA non-coding upstream 510225 10766600 ~ 10768258 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 179776 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 223255 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 923839 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 1856782 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 2082416 8155932 ~ 8158590 (-)
G69537 NA other upstream 540341 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 868654 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 1403636 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 2831233 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 6465698 16722073 ~ 16737877 (-)

Expression


Co-expression Network