AMCG00014368


Basic Information

Item Value
gene id AMCG00014368
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11104978 ~ 11121831 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014368
ATGCTTTCCCCACTTGACAGCGTTATCTCCTATGTGAGGTTTGACATTCTTCAAAGAATTTTGTCCAGGGTTTTTGGGATCAACATAGTCCACGTGATGGTTATAACAGACATTgatgacaaaataattaagagaGCTTCAGAGGAAAATGTCCCGCCATTAGTTCTCGCAAGGCTATATGAAGAGGAGTTTAAAAATGATATGGAAGCTCTTAAGgTGCTTCCTCCTACAGTCTACATGAGAGTGACTGACAATATTCCTCAAATCATTGCGTTCATAGAGGgcattattaataacaaacatgcCTATGTCACAAGTAAAGgGAATGTGTATTTTGACATCAAGTCTATTGGAAATCAATATGGGAAGATGATAAGAATGGGTGAGACAGAGGGCGAACCAGGGGACTCAGATAAAAGTGATGCCAGGGATTTTGCGCTCTGGAAAGCATCCAAACCACAGGAACCAAACTGGGTGTCTCCTTGGGGACAGGGGAGACCTGGCTGGCACATTGAATGTTCGACAATAGCCagTTCTGTTTTTGGAAGTCAGCTTGATATCCATTCTGGTGGAATTGATCTTGCGTTTCCGCACCATGAGAATGAAATTGCACAGTGTGAAGCTTATCATCAGTGTTCGCAATGGGGCAACTACTTCCTACACTCAGCCATCGACTACAGCAACACCAGCATGACTGTGGCAAAAAGTGTTCTTAGCtccatttcttctttctttgaTGATTCAAACGCGTACATTAAAGGGCAACATCTATGCCAGGCTGTGGATGAAGGTGTGTTATGGGAAAGGTTAGCCACAACAAAAGTAAATGTTCAGAAAGCTCTGGCAAATGACTTTGACACCCCAAGGGCTGTCGATGCAATTATGAGCCTCATTCACCATAGCAACCAACAGCTTCAGGGAGTTGCCAAGggTCGATCCTGCCGAAGTCCTGTGGTTTTTGGAGCTATCCAGTCATATATTACGACATTCCTGGATGTAGTTGGGTTTGATTTACAGGACAGACAGTTCCGCAGCCAGGTACGGAGATATGCTTTGGCCGTGGATGAGCTGGCTGCTCTGTCATCGGAAAGCAGCCAACCAACACAGGAGGAAAAAGCCAAAATAAAGCAGCGCAAGAGAGAGCTTATAGCAGAACGAGAGTGTTTGCTCATAGCCTGTGATGTGTTTCGGCAAGATCTCGCACCTTTTGGGATTCATATAAAGAAAGTCTACTGCTAA

Function

GO: NA

KEGG:

id description
K01883 CARS, cysS; cysteinyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014368 True 1239 mRNA 0.44 12 11104978 11121831

Neighbor

gene id symbol gene type direction distance location
AMCG00014364 NA coding downstream 8545 11088747 ~ 11096433 (-)
AMCG00014360 NA coding downstream 113834 10974465 ~ 10991144 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding downstream 130861 10961249 ~ 10974117 (-)
AMCG00014358 NA coding downstream 201782 10900008 ~ 10903196 (-)
AMCG00014353 NA coding downstream 396960 10652279 ~ 10708018 (-)
AMCG00014366 NA coding upstream 17621 11139452 ~ 11144825 (-)
AMCG00014367 ankrd10,LOC106586677 coding upstream 45809 11167640 ~ 11175442 (-)
AMCG00014372 atp11a,LOC106575518 coding upstream 337782 11459613 ~ 11502601 (-)
AMCG00014380 rcbtb1 coding upstream 575358 11697189 ~ 11722453 (-)
AMCG00014379 spryd7,LOC108430519,LOC107600395,LOC108266652 coding upstream 628360 11750191 ~ 11755461 (-)
G69539 NA non-coding downstream 283906 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 308789 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 311832 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 327537 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 331556 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 647859 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 757266 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1848422 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1963532 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 2180093 13301924 ~ 13302379 (-)
G69537 NA other downstream 306831 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1043748 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1087227 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 1787811 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 2720754 8383285 ~ 8384224 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 3198 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 538180 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1965777 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5600242 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 6325037 17446868 ~ 17462290 (-)

Expression


Co-expression Network