AMCG00014374


Basic Information

Item Value
gene id AMCG00014374
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11660011 ~ 11667537 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014374
ATGCAGCATTATCCGCagctggaggtgggggggtctgCAGCTTCAGAGGAGCTGAACTCTGTGGAGATCAGCTCAGATCCTCTTCCACACATAACTAAAGCGAGAAGCGTCACCGCCTCCTGTCCTCCCTGTCACAAACCAAGGTTATCCAAAGCTAACTTGTTTACTCTATTGAGCCTGTGGATGGAACTGTACCCCAAGAATaagacaaataaagaaaacgGAACACAACAGACTAGGACAACTGGACTGGTGGTGGTGCAGGAGAGCAAAATCACAGGCCTGCACTGCTCCAGCTCCGAGCTACACGCCGGACAAATAGCCATTATCAAACACGGGACACGGTTGAAGGGCTGCAATCTCTACTTCTCCAGGAAGCCCTGCTCTACTTGTCTGAAGATGATTGTGAATGCTGGAGTTAATAGGATATCCTACTGGCCTGCTGATCCTGAAATAAGCCTGCTACCTGCCGAcaagggcagcagcagcagcagcactgggggCTACAGCATGCTGGACGCCACACTGGACGCCAGTGCAGCCGAGAGACTGAAGTCCAACAGCCGGCCACACATCTGTGTCCTCCTGCAGCCTTTACCCAGCAACATGCACCAGTTTGTAGAAGAGACTTCAAAAAACGGTGACTTTCTGGGGAAAATCGCCTATGAGAACCCCCAGTTAAATATAGAGGAACTGTTTACCGATCACCGCAAGAAGAAGCTTGCGGACCACACGAAGGTCTTCTTCATTTCGGACGAGGATCAGCACAGGGACATCTTGCTGAAAATGGGGTTGGAGAACTTCTGCCTGAACCCGTACTTCTCCAGCCTGAGGCAGCACATGAGAGACCTCATCCAGGTCTTGGTCACGGTGGACTCCAGTGTGCCTGACTGCAGTGGCTATGGGTTCTACTGCAGAGATCTGCAACAGGCTGGCAGGAACCCCCCACACCAGCTGTCCCAGGAGGAAGCCAGACACTGCGTGATCCAGGCCAGGCTTTTGGCATACCGGACTGAGGATCCGAAGGTTGGAGTTGGTGCTGTCATCTGGGCACAGAGAAAGTCTGGCAACTGTGACGGCACAGGACAGATGCACCTTGTTGGATGTGGTTACAACGCCTACCCAGTGGGGTCGGAGTACGCCGAATTCCCACAGATGGATGACAAGCAGCAAGACCGGCAGATTAGGAAGTACAGATACATCATCCACGCTGAGCAGAACGCCCTGATCTTCAGGAGCATGGAGATCAATGAGGACGAAAACACCATAATATTTACTACGAAGTGCCCATGTGACGAGTGTGTGCCTTTGATCAAGGGCTCTGGAATCAAACAGATCTACACGGCGGATCTGGACAGTGGGAAAGACAAGGACGACATATCTTACCTCCGCTTTGACCGTCTCCAGGGTGTTCACAAGTTCACGTGGCAGAGAGAGAAACCGGATGGATGTGTCCTGGATCAAAGTCCGACGGCACTGAAAGCTAATGGTATCCTGGGGAAGCACAGCAGACAAGTGCGACAAGAAAGCTGGACCAACAAGAAGCCCTGTGTGCAGGACAAATGAAAAGGCTGTTTTAGCACTGGACAGGTATTGGGAAAAGTTCTACACAACCAGCCTGGGAGAAAAAATGGATATCTGTGTCAGCAAATCTGCCCACCCTTTATAATCATGTGCAATTTATAACCATGTATGTGCTCAAATATTGGGAATAGTAAAGATACCTCATGCAAGTTGGCTTTTTAAATAGCCCGTCTTCCAAATATCAACCTGCAGTAAATACCACcatatttgtatattacataattttcctgtcatttaacaaatacttttatacatttgaatcaCCCAATCAACAGATCGCAATGGGGAGAGCATTGtgtttaataacaatataagCATCTCTGCCCGTgaatctattttgttttgtaatttaccAGTCATATTGGTAACGGTTTATATCGCAGAGAGtgcaaaatacattatgaaCCAAAGCCTAATCAGCTCTAAAATGGTTAAATACAACTAGTGTGCAGTcctatttaaatgtaaccataTTGTTTTACTCTAGTAAAGAGTACTTCATTTAAGACGGTATGCCTGAAAGATGTTGTATGGTTCCTGTAAACATCAAATGCTGTCATTCCAATCTTTTTGAGAAAATAAGGTCCCCAAACCAGAGACTGATCTTTCAAAGCTTAGTCCCAACCTAACCATGATTAACAACATAGACTGAAACTACAGAAAACACAGTCTGGGCAAATCATATTTCTCTTTGATAAATAGTCTGAGGtccttttacattgttttttgttcagaatcccttttgttttcatttttatttagtgtctttttaaattatgtctCTGATTCAGAATGGACAATTGCTCCAGTGTAATTCAGATAATGTCACACTATCTCTGGCAGTATGAATGATGTGTGTTACACTGTAAATTCTCAGCCAGTACGTTTACTAAGGTGCTTGTTATTAAggattcattttaaagcatgtcTAATTTAACCTTTATTGATACATAATGCTTTCTCAAGATgtactaaattaataaaacaaatatctgaagCTGGATTTGGAACAGACTAAATACTTCATTTACTGCAatggtaaatacatttaaacttgtGTGTGCTCATACTTGAAAACCAGGAATaggtatttgtatattttcccACAAAGTTACCTGGGCATTTGTGGGACTGGGCGTTACTACACAGAGGTACCTTATATGTTTGAACATCTATTTCCCTTGTTGATTCACTGATTATGTTTGAGTATTTCAGGAGGGttaaatgtttgcttatttgaAGTGaagtctaaaaatgtttttattaaatgtttatatatttgtggaTCACAATTTATAGTGCGGTGTTAATTTAATGGGTAAAGTAAAAATAGattgttttaagtttgaatGATTTATCTTGTGACTCTTATTGTTATAGTCAGACATTGAGGTTTCAGTAGTGGCTACTCAAACTTCTGTCTCATATATTCCGGTGTATATTTGAAa
>TU87063
GGAGCATGGAGATCAATGAGGACGAAAACACCATAATATTTACTACGAAGTGCCCATGTGACGAGTGTGTGCCTTTGATCAAGGGCTCTGGAATCAAACAGATCTACACGGCGGATCTGGACAGTGGGAAAGACAAGGACGACATATCTTACCTCCGCTTTGACCGTCTCCAGGGTGTTCACAAGTTCACGTGGCAGAGAGAGAAACCGGATGGATGTGTCCTGGATCAAAGTCCGACGGCACTGAAAGCTAATGGTATCCTGGGGAAGCACAGCAGACAAGTGCGACAAGAAAGCTGGACCAACAAGAAGCCCTGTGTGCAGGACAAATGAAAAGGCTGTTTTAGCACTGGACAGGTATTGGGAAAAGTTCTACACAACCAGCCTGGGAGAAAAAATGGATATCTGTGTCAGCAAATCTGCCCACCCTTTATAATCATGTGCAATTTATAACCATGTATGTGCTCAAATATTGGGAATAGTAAAGATACCTCATGCAAGTTGGCTTTTTAAATAGCCCGTCTTCCAAATATCAACCTGCAGTAAATACCACcatatttgtatattacataattttcctgtcatttaacaaatacttttatacatttgaatcaCCCAATCAACAGATCGCAATGGGGAGAGCATTGtgtttaataacaatataagCATCTCTGCCCGTgaatctattttgttttgtaatttaccAGTCATATTGGTAACGGTTTATATCGCAGAGAGtgcaaaatacattatgaaCCAAAGCCTAATCAGCTCTAAAATGGTTAAATACAACTAGTGTGCAGTcctatttaaatgtaaccataTTGTTTTACTCTAGTAAAGAGTACTTCATTTAAGACGGTATGCCTGAAAGATGTTGTATGGTTCCTGTAAACATCAAATGCTGTCATTCCAATCTTTTTGAGAAAATAAGGTCCCCAAACCAGAGACTGATCTTTCAAAGCTTAGTCCCAACCTAACCATGATTAACAACATAGACTGAAACTACAGAAAACACAGTCTGGGCAAATCATATTTCTCTTTGATAAATAGTCTGAGGtccttttacattgttttttgttcagaatcccttttgttttcatttttatttagtgtctttttaaattatgtctCTGATTCAGAATGGACAATTGCTCCAGTGTAATTCAGATAATGTCACACTATCTCTGGCAGTATGAATGATGTGTGTTACACTGTAAATTCTCAGCCAGTACGTTTACTAAGGTGCTTGTTATTAAggattcattttaaagcatgtcTAATTTAACCTTTATTGATACATAATGCTTTCTCAAGATgtactaaattaataaaacaaatatctgaagCTGGATTTGGAACAGACTAAATACTTCATTTACTGCAatggtaaatacatttaaacttgtGTGTGCTCATACTTGAAAACCAGGAATaggtatttgtatattttcccACAAAGTTACCTGGGCATTTGTGGGACTGGGCGTTACTACACAGAGGTACCTTATATGTTTGAACATCTATTTCCCTTGTTGATTCACTGATTATGTTTGAGTATTTCAGGAGGGttaaatgtttgcttatttgaAGTGaagtctaaaaatgtttttattaaatgtttatatatttgtggaTCACAATTTATAGTGCGGTGTTAATTTAATGGGTAAAGTAAAAATAGattgttttaagtttgaatGATTTATCTTGTGACTCTTATTGTTATAGTCAGACATTGAGGTTTCAGTAGTGGCTACTCAAACTTCTGTCTCATATATTCCGGTGT

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014374 True 3032 mRNA 0.43 9 11660011 11667537
TU87063 False 1788 TUCP 0.36 3 11660021 11662493

Neighbor

gene id symbol gene type direction distance location
AMCG00014372 atp11a,LOC106575518 coding downstream 157410 11459613 ~ 11502601 (-)
AMCG00014367 ankrd10,LOC106586677 coding downstream 484569 11167640 ~ 11175442 (-)
AMCG00014366 NA coding downstream 515186 11139452 ~ 11144825 (-)
AMCG00014368 NA coding downstream 538180 11104978 ~ 11121831 (-)
AMCG00014364 NA coding downstream 563578 11088747 ~ 11096433 (-)
AMCG00014380 rcbtb1 coding upstream 29652 11697189 ~ 11722453 (-)
AMCG00014379 spryd7,LOC108430519,LOC107600395,LOC108266652 coding upstream 82654 11750191 ~ 11755461 (-)
AMCG00014385 NA coding upstream 199074 11866611 ~ 11867529 (-)
AMCG00014386 LOC106575503 coding upstream 214958 11882495 ~ 11891473 (-)
AMCG00014384 NA coding upstream 226223 11893760 ~ 11895883 (-)
G69539 NA non-coding downstream 838939 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 863822 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 866865 10792919 ~ 10793146 (-)
G69532 NA non-coding downstream 882570 10777051 ~ 10777441 (-)
G69531 NA non-coding downstream 886589 10773183 ~ 10773422 (-)
G69743 NA non-coding upstream 102153 11769690 ~ 11771393 (-)
G69759 NA non-coding upstream 211560 11879097 ~ 11880456 (-)
G69849 NA non-coding upstream 1302716 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1417826 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 1634387 13301924 ~ 13302379 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 522925 11125029 ~ 11137086 (-)
G69537 NA other downstream 861864 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1598781 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1642260 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 2342844 9305239 ~ 9317167 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1420071 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 5054536 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 5779331 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 5921730 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 6323114 17990651 ~ 18022095 (-)

Expression


Co-expression Network