AMCG00014377


Basic Information

Item Value
gene id AMCG00014377
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11689233 ~ 11696926 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014377
cagggcagtgcGGGCAGTGAAGTGCGGGCAGTGAAGTGCGGCAGGGCAGTGCGGCAGGGCAGTGAAGTGCGGGCAGTGAAGTGCGGCAGGGCAGTGAAGTGCGGCAGGGCAGTGCGGCAGGGCAGTGAAGTGCGGCAGGGCAGTGCGGCAGGCCGCGGGATGTCCAGGACGCCTGTGAGGTGCGGGTTCTGCTGCTCCAGCCAGGAGACGCGAGAGACCGGGCCGCTGCTGAGGCAGGGCAGCGTGGTGGCGCACAATATGTGCATGTTATTTTCTTCTGGGATCGTTACCAAGGAGTCTCCTCGAAGTTCTCTGGCAGGATTTCTGGAAGATGACGTGAGAAAGGAAATGAACCGGGGGAAGAGACTGAGATGCTTCCGATGTAAGAAGAATGGTGCGACTGTTGGGTGTGAGGTACCAAAGTGCAAAAGGTCTTATCATTACCTGTGTGCCCTAAAGGATGGCGCTAAAAAAGTGGAGGATGACAATGAAGGTATTTTTAAgaTTTACTGCGTCCAGCATCTTGAATATGAAGAGACTAAAGCAGATAGTCTCCCCGAGTCGACTCAGGATTCTGAGGCAGAGTATAtggaagatgaagatgaagatgttACTGATGATAGTGAGGATGAAGTGAGGAGCAAAACCAAGAGAAAGAAGCCCAGTACAGTACTTAGGAgtgcaagtaaaaaaaacaggacagagAATGCGAACAACAGCAGTAGCAGAGATGATGAATTGAGGGGCAAAGgcgGAAGTGACTCCAGTGAATTCGAACTCGTCTCTGAGGAAAGGGAAGGAGCCATTAATCCCAGGAACGACACAGCCAACCGTAGATTAAGTTACACAGAAGAAGACCCAGAGAGTGAATCTCTACAAACCGGGAATCCAGCCTCCTTCTGGAGGAAGTGCCGGGAGGCTGGGTGTGTGGAAAAGATCTTCTCGGAGTTGATTTTAGCCATGACCGCTGTTTCAGAGAAAATAAGCACTGACCAGGCCGATGATGAAGAAAATGCCTTTTCTTTGAAAATCCTGCAAGCGTCTGGGATGTTATCACGCATACTTGAAGAGAAGGATAACGAATTCAAGGAGAGACTGGAAAAACTTCAAAGGGAACGAGATAAGGTGATTATCTCAAACCAAGCAGTGGATGAACTGAGACATATGTTACACAATATCCAGCCTTGACTGAGCAGGACTGGTGCTGGGTCAGGCTTATATCTGCTCTAATACTACACCTGTAGTACTAAAATCAATCTCCATCCAATAGCTAgataacagaaataataaagagTATAATTGTCTTTGTCAGgtaaatagatttgttttttaatgtcttatttTCTCCAGTGGTGTAATGGATTTTTtagttctgttatttttttgtgttattagtaAAACTGGCACTAGTAGGATCTATTCCTTAcagaaactttattttcttacatgttTGCATGCACTTTTAGTAATAAACTGTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014377 True 1481 mRNA 0.47 12 11689233 11696926

Neighbor

gene id symbol gene type direction distance location
AMCG00014378 NA coding upstream 11052 11668156 ~ 11678181 (+)
AMCG00014376 cab39l,LOC103356757 coding upstream 29687 11644028 ~ 11659546 (+)
AMCG00014373 NA coding upstream 48773 11605968 ~ 11640460 (+)
AMCG00014371 tubgcp3 coding upstream 127363 11540432 ~ 11561870 (+)
AMCG00014370 sox1a,LOC105893305,LOC106586732,LOC101064967,LOC107692134,LOC107718482 coding upstream 295828 11392389 ~ 11393405 (+)
AMCG00014381 NA coding downstream 14472 11711398 ~ 11711931 (+)
AMCG00014382 NA coding downstream 62975 11759901 ~ 11761901 (+)
AMCG00014375 NA coding downstream 69502 11766428 ~ 11767590 (+)
AMCG00014383 NA coding downstream 173099 11870025 ~ 11877714 (+)
AMCG00014387 NA coding downstream 203596 11900522 ~ 11901421 (+)
G69681 NA non-coding upstream 47781 11641083 ~ 11641452 (+)
G69610 NA non-coding upstream 467959 11221070 ~ 11221274 (+)
G69556 NA non-coding upstream 727304 10959326 ~ 10961929 (+)
G69540 NA non-coding upstream 851003 10837204 ~ 10838230 (+)
G69499 NA non-coding upstream 1195837 10493147 ~ 10493396 (+)
G69722 NA non-coding downstream 22392 11719318 ~ 11722767 (+)
G69739 NA non-coding downstream 86939 11783865 ~ 11784083 (+)
G69778 NA non-coding downstream 903178 12600104 ~ 12600313 (+)
G69833 NA non-coding downstream 1283333 12980259 ~ 12982434 (+)
G69959 NA non-coding downstream 1637288 13334214 ~ 13335185 (+)
AMCG00014345 NA other upstream 1537320 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 1680585 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 4206673 7464503 ~ 7482560 (+)
G68848 NA other upstream 4272639 7413640 ~ 7416594 (+)
G68830 NA other upstream 4339766 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 1549383 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 1958312 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 2492638 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 2605521 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 3524988 15221914 ~ 15242333 (+)

Expression


Co-expression Network