AMCG00014378


Basic Information

Item Value
gene id AMCG00014378
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11668156 ~ 11678181 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014378
GAAAGCATCTACCCTGGGTCCTAAACCCTGCCCGCTCGTGGTTGGTAAACAATATTGTTCGTTAGGGCTCCGATAtcagaatattttacatatcactgaaaaggtttttttttttaaatggcaaaagAATCGTCGGTTTATTGCGGATTTTGCCAGGAGTCCAAAGAGACGCGTTCAACCGGACCCCTGTTGAAGAAGGACAGCGTGGTTGCACACGAGTGTTGCATGTTGTTCTCTTCTGGGATCCACACCAAGAGCATTCCTGAATTTGATGATCTGGCAGGATTTTCAGTAGAAGATGTGACCGAGGAACAGAAGCGGGGGAGCAAACTGGCATGTGACGCTAAATGCTTCCAATGTAAGAAGTATGGTGCGACTGTTGGCTGTGACCTCACAGAGTGCGAAAGATCTTATCATTACTTGTGTGCCCTAAAGGACAAGGCTGAAAAGCTGGAAGATGATGAAAAGGGTATTTATAAgATTTTCTGTGAACTGCACAAGGATTTTCGAGATGATGAATCAGGAGtagATGGAAGTGACTCCTCTTGTGAAGATAGTCAGATGTCTGTGGAATCGGATGGTGATGAAGTCGTGATGCGTACACCCAGGCGTAAATTTAATTGTCCaGCGTTCAATGAAGACTCAGAATCTAAAATACAAAACCGTGCCGAAGAACCAGGGACTTCAGCTTCAGGGTTTACTGTGAAGCCCTGTAGTGTCAACATAAGGCCCTGCCCGGTTATGAAAAAAGATCCTCCAAGCAAACCTCTACAGAAAGGGAATCCGGCCTCATTCTGGAGGAAGTGCCGGGAGGCTGGGTGTGTGGAGAAAATCTTCTCAGACTTCATTTTAGCCATGACCGCTGTTTCAGAGAGAATAAACACTGACCAGGCAGATGATGAAGACTACGCCTTTTCTCTGAAAGTCCTGCAAGCGTCTGGAATGTTACCCACAATTCTTTCAGAAAAGGAACACGAATTCGAGGAGAAACtggaaaaagttaaaaaagaaaaggatgttTTGGTGAACTCAAAACGAGCAATGCATTCAGTGAAAGAGATGTTGAATATCGAATAAGTGACCAGGAGAGGAATGCCAGTGCAGAATCTCAACTTGTACCTTTTAGAAGAAAATGTGTCAATATGTTTGACTTGTCTTTTCAGAAGAGCAGTAATCCTATAATTCTAAAGTTATATCTGGTCATTTCGTGAATTTATATGGATTTACATACTTCAGAATCCAGTTAAgttcacaatattattttagtttttagttctTCTTAAACAATTttgtcactgtaaataaaatattaatgttccTCTTGTACCCAAGGTTAGTTATCTTACCTGTGACAGATGCTGCCTTGTTCGTACTTCTGAAATAAAAGGGTTTGAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014378 True 1399 mRNA 0.41 12 11668156 11678181

Neighbor

gene id symbol gene type direction distance location
AMCG00014376 cab39l,LOC103356757 coding upstream 8610 11644028 ~ 11659546 (+)
AMCG00014373 NA coding upstream 27696 11605968 ~ 11640460 (+)
AMCG00014371 tubgcp3 coding upstream 106286 11540432 ~ 11561870 (+)
AMCG00014370 sox1a,LOC105893305,LOC106586732,LOC101064967,LOC107692134,LOC107718482 coding upstream 274751 11392389 ~ 11393405 (+)
AMCG00014369 arhgef7a,LOC107668898,LOC107712280,LOC107569023 coding upstream 447382 11177961 ~ 11220774 (+)
AMCG00014377 NA coding downstream 11052 11689233 ~ 11696926 (+)
AMCG00014381 NA coding downstream 33217 11711398 ~ 11711931 (+)
AMCG00014382 NA coding downstream 81720 11759901 ~ 11761901 (+)
AMCG00014375 NA coding downstream 88247 11766428 ~ 11767590 (+)
AMCG00014383 NA coding downstream 191844 11870025 ~ 11877714 (+)
G69681 NA non-coding upstream 26704 11641083 ~ 11641452 (+)
G69610 NA non-coding upstream 446882 11221070 ~ 11221274 (+)
G69556 NA non-coding upstream 706227 10959326 ~ 10961929 (+)
G69540 NA non-coding upstream 829926 10837204 ~ 10838230 (+)
G69499 NA non-coding upstream 1174760 10493147 ~ 10493396 (+)
G69722 NA non-coding downstream 41137 11719318 ~ 11722767 (+)
G69739 NA non-coding downstream 105684 11783865 ~ 11784083 (+)
G69778 NA non-coding downstream 921923 12600104 ~ 12600313 (+)
G69833 NA non-coding downstream 1302078 12980259 ~ 12982434 (+)
G69959 NA non-coding downstream 1656033 13334214 ~ 13335185 (+)
AMCG00014345 NA other upstream 1516243 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 1659508 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 4185596 7464503 ~ 7482560 (+)
G68848 NA other upstream 4251562 7413640 ~ 7416594 (+)
G68830 NA other upstream 4318689 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 1568128 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 1977057 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 2511383 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 2624266 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 3543733 15221914 ~ 15242333 (+)

Expression


Co-expression Network