AMCG00014386 (LOC106575503)


Basic Information

Item Value
gene id AMCG00014386
gene name LOC106575503
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11882495 ~ 11891473 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014386
TATGGGTTCATAAATACCTGCCTTAAGTCTCTGGTTGTTGAAAAATTTGGGGAGGAAACATGGGAAAAACTAAGgATCCAGGCCGAGGTTCAGGATACTTTCATGACATACGAAGTATATGACGATGTCATCACTTTGAGACTGGTGAACGAGGCCTGCAAGATGCTCAACGTGTCTTCTGAAGTGGTCCTGAAGCTCTTCGGGGAGTATTTCTTCAGCTTTTGCAAGGAGTCAGGGTATGACAGGATGCTGCGGACGCTGGGCGGAAATTTGATGGAGTTCATTGAGAACCTCGATGCTCTCCATAGCTACCTTGCACTTTCTTATCAGGAAATGAATGCCCCCTCTTTTCGAGTGGAGAGGAGGAAGGATGGGGAAATGCTGCTTCACTACTACTCTGACAGGAGAGGCCTCTGTCATATTGTGCCAGGGATAATAGAAGCTGTGGCCAAAGACTTTTTCAACAGTCAAGTGCACATGACCATCCTCAACCAATCTGAGGAGGAAGAGCGGACGGGGAAGAAGGAGCACGTGGTGTTTCTGGTCATTCAGAAATCAAACATAGTCAAAAAAAAAGCGCGTTCAGACGGGGGAGCCAACTACAACAAAAAGCGGGATAAGGAGGCGATGGAGGAAACCTTGAGGAAAATGAAGGCAACGTATGctgctctccctccctgccctggGAGAAGATCACACTGGGAGATTGTGAGGAGCATTGTCAGGTTTGGACAAGGCAACTTGTTAAATACATTCAGGCCATGTTACCCCGAAAAGTTGTGGATGGAGGAGACCACATTCTGCAATGTGTTCCCTTTCCACATTGTTTTCGACGGGGCACTGAAGGTGAAGCAGACCGGGGTCAACATTCAGAAGTTTGTTCCCGGCCTGCAGACCATGGACATCCAGGTGGATGAATACTTCAGCATCACGCACCCCCAGGTCACCTTCACCATCGACAGCATCAGAAAGTTCATCAACAGCCAGTTTGTCCTGAAGACTCGAAGAGAGATGATGCCAGAGGCCTCAAAGGATCTGCCTATGCTCAAACTCAGAGgGCAGATGGTGTGGATGGACACGCTGGGCTGCATGGTGTACCTCTGCTCCCCGAAGCTGCGCAGCCTTGGCGAGCTGGAGGAGCGGGGCATGCACATCGCCGACATCGCCCAGCACGACACCACGCGTGACCTCATCCTGCTCAACCAGCAGCGGCTGGCCGAGATCGAGCTCTCTAACCAGCTGGAGCGCAAGAAGGAGGAGCTGCGCATCCTGTCTAGGAACCTGGAGGTGGAGAAGAAGAAGactgagaccctgctgtacgCCATGCTTCCCAGACACGTGGCCAACAAGCTCAAGGAGGGGAAGAAAGTGGAAGCAGGGGAGTTCAAGGAGTGCACCATCCTCTTCAGTGACGTGGTGACTTTCACAAACATCTGTGCAGCGTGTGAGCCCATACACATTGTCAATATGTTGAATTCCATGTACTCTAAATTTGACCGGCTGACCAATGTCCACGATGTGTACAAGGTTGAAACTATAGGGGATGCCTACATGGTGGTTGGAGGTGTGCCAATCCCAGCGGACAATCATGCAGAGCGAGTGGCCAATTTTGCCCTGGGCATGAGAATTGCGAGCAGAGAGGTCACCAATCCTGTCACAGGGCATCCAATCCAGATCAGGGTGGGTCTTCACACTGGACCAGTACTAGCAGGGGTGGTGGGAGACAAGATGCCAAGATACTGCTTATTTGGAGACACTGTCAACACTGCATCCAGAATGGAGAGTCACGGAGTGCCCAACCACATCCATCTTAGCCCCACATCGTACAGAGCCCTTGAAAATAAAGGATTTGAGATCACTGAAAGGGGAGAAATCGAGGTGAAAGGCAAAGGGAGGATGATTACTTACTTTCTGATCCAGAATCTGCAGCTCTCTGAGGATGAGATCATGGACAGACATAGTAAAGAATCACCCCTGAAGACAGAGGGTGAGGAGGGGGCTGTAAGTAACAGAAAA

Function

NR:

description
PREDICTED: guanylate cyclase soluble subunit beta-2-like isoform X2

GO: NA

KEGG:

id description
K12319 GUCY1B; guanylate cyclase soluble subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014386 True 2016 mRNA 0.51 13 11882495 11891473

Neighbor

gene id symbol gene type direction distance location
AMCG00014385 NA coding downstream 14966 11866611 ~ 11867529 (-)
AMCG00014379 spryd7,LOC108430519,LOC107600395,LOC108266652 coding downstream 127034 11750191 ~ 11755461 (-)
AMCG00014380 rcbtb1 coding downstream 160042 11697189 ~ 11722453 (-)
AMCG00014372 atp11a,LOC106575518 coding downstream 379894 11459613 ~ 11502601 (-)
AMCG00014367 ankrd10,LOC106586677 coding downstream 707053 11167640 ~ 11175442 (-)
AMCG00014384 NA coding upstream 2287 11893760 ~ 11895883 (-)
AMCG00014390 il1rapl1,LOC100693228,LOC101468878,LOC102196907,LOC101172314,LOC107381071 coding upstream 92600 11984073 ~ 12003809 (-)
AMCG00014391 il1rapl1,LOC106575569,LOC106574938,LOC105023742 coding upstream 305566 12197039 ~ 12199190 (-)
AMCG00014389 NA coding upstream 830269 12721742 ~ 12726644 (-)
AMCG00014395 NA coding upstream 838254 12729727 ~ 12739665 (-)
G69759 NA non-coding downstream 2039 11879097 ~ 11880456 (-)
G69743 NA non-coding downstream 111102 11769690 ~ 11771393 (-)
G69539 NA non-coding downstream 1061423 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 1086306 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 1089349 10792919 ~ 10793146 (-)
G69849 NA non-coding upstream 1078780 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 1193890 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 1410451 13301924 ~ 13302379 (-)
G69973 NA non-coding upstream 1412953 13304426 ~ 13375879 (-)
G70034 NA non-coding upstream 1731642 13623115 ~ 13623381 (-)
AMCG00014374 NA other downstream 214958 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 745409 11125029 ~ 11137086 (-)
G69537 NA other downstream 1084348 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 1821265 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 1864744 10001134 ~ 10017751 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 1196135 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 4830600 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 5555395 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 5697794 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 6099178 17990651 ~ 18022095 (-)

Expression


Co-expression Network