AMCG00014395


Basic Information

Item Value
gene id AMCG00014395
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 12729727 ~ 12739665 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014395
cTTAAGCTGCTGATCGACCAGGAAAAGGAATTCCAGGAACGGAAGGAAAAGGAGAACAACAAGAAAGTAAACAACCTGAAGGAAGAGCTGACAAAGCTGAAATCTTTTGCATTGCTAGTGGTCGATGAGCAGCAGCGGTTGACCGAGCAGCTCGTCCAGCAGAGCGGCAAGGTCCAGGTACTGACAGCAAGTGCGGCCCAGGCCCAGGAGAAGCTAATTACTGTCCAAGCCAGggcagaggaagaggaacaAAAAGTATTTCGGTTGGAGGCTGACATACGTGACCAAGCCAGTCGCTTCCATCAGGAGCAGGAGGCCATGACTGCCAAGCTGACCAATGAGGACACCCACAACCGACAGCTCCGACAGAAACTAGCCACCCTAAGCAGGCAGATTGATGACCTGGAAGAAACTAATAAGACACTCCGTAAAGCAGAGGAGGAACTCCAGGACCTTAGAGACAAGATCAACCGTGGGGAGTGTGGCAACTCCAGCTTAATGGCTGAGGTGGAGGAGTTAAGGAAGAGAGTGCTGGAAATGGAGGGGAAAGACGAAGAGCTAATCAAGATGGAGGACCAGTGCAGGGACCTCAACAAGAAGTTGGACAAGGAGTCTACCCAGAGCCGGAGCCTGAAGATTGAGGTGGACAAACTGAACCGCAGGATCATGGAGCTTGAAAAGCTGGAAGATGCCTTTGGAAAGAGCAAACAGGAATGCTGCTCACTGAAGTGCAAtctggagaaagagaggaatgTTACTAAGCATCTCTCAAATGAACTGGACACACTGAAAGTGAGAATCAGGGAGTTAGAGGCCGTTGAGAGCCAGCTGGCAAAAGCAGAGCTTACCCTGAAAGAAGACCTCACTAAGTTGAAGACACTGACAGTCATGCTGGTGGATGAAAGGAAAACCATGGCTGAGAAGCTGAAGCATACAGAGGAGAAATTGCAAAGTACTACTGACAAGCTGCAGGCTGAACAGGACAAGGTAACATCAGTGACCGAGAAGCTGATTGAGGAGAGTAAAAAGGCCTTAAAATCCAAGGCCGAGCTTGAAGAAAAGATGTACAGTGTGACCAAGGACAGGGATGAACTAAAGGCCAAACtgaaaggagaggaagagaagggtGGTGACCTGCAGTCCAAGGTTAACATGATGAAGAAGAGGCTTCAATCGCTGGAGGCTGTGGAGAAAGAATTCTTGAGAAACAAAGCCAAAGAAGAGCATATCAAGGTGCCTGGAGTAACCCGCTTTCACCAGGAAGACAACAAAGTAAAGGATCTGACGCAAGAGGTAGAGAGGCTAAGGAGAAAGCTCAAGGAGATGAGGGTGGTAGAGGATGACTTGCTGAAAACTGAGGATGACTTTGAATCTCTTGAGAGAAGGTACTCTAATGAACAAGAAAGAGCAAAGTCCCTTATGGAAGAGCTAGAAATATACAGAAATGAGCTCTCTAAATACCAGCTAGCAGAGAAGGAAGAGTCTAACCAGGAGCACATTCTCTACAAGCGTCTGAAAGAAGAGGAGGCCAAATCCAGCCACTTAACCAGAGAGGTCGAAGCCCTGAAGGAAAAGGTCCACGAATACATGGGGACGGAGGATTCAATATGTCGGCTGAAATCTGACCATGGCACGCTGCAGCGGAAACTAACTCAGCAGGAGAGCAAGAATAAAGAACTTGCCCGAGAAATGGAAAACCTTACCAGGGAACTGGAGAGATATCGGCGCTTTAGTAAAAGCCTGAGGCCTGGTTTAAATGGAAGAAGATTCTCAGACTTGCAGGTCTCCTCAAAGGAAGTACAGACAGACCCAGCAGATAATAAGCCTCCCGATTATAAGAGCCTAGCACCTTTAGAACGGGCTGTGGTGAACGGAAAACTGTATGAGGAAAGTGATCCTGAGGACGACCCAAATTACAGCGATGAACAGCCAATCAACAAAAGCAATCCTTCCCTCATCAACAATGTTAACAACCATAACAACAGGAGATCAAGAGTCCCATTCACCAAAAGCAAGGAAAGCCAGCATCCTCTCAATGGTAAAGTGCTAAGCCGCCAAAATGGGAATCCTGTGCAGCAAGGGGATGTGGTGCTGACTCACACCCCAGGACAGCCCCTGCATATCAAAGTGACACCTGACCATGGGCAAAATATGGCCATGCTGGAGATAACAAGCCCAACCTCAGAGAACACCCACTCTTTCACCAGCACCGCAGTAATCCCCAATTGTGGGGGTGTTCCAAAACAAAGAATTACCATCATCCAGAATGCCTCCATCTCTCCAACCACAAAATCCAAAGGCTCCCCCTCTTCTGAAGGATTTTGCACCCCTGACAGAGCCATGTCACCCCTCACCATGGCTACCTACTCCCGAGCCATGACCCCAGACTCATCTGGATCCATAACTCCTGACAGGGCCATGTCACCCATCCACATAGTGGCCGTGACCACCAGCTCCCCAGATCGATCTCTCACCACAGAGCCAGTGGAGCTCAGCGGGAATCACACAGTTTTCCGTGTGACCCCAGAAAGGCAAAATAGCTGGCAGCTGCAGAGATCCAACAGCACTGGGCCCAGTGTCATCACCACTGAGGATAACAAAATCCATATCCACTTAGGGAACCCCTATATTCAGGCCATTAACAGTACATCGCGGCCCATGAGTCCTTGCTTTTCCCCAGGGCAGGAAAACAGAACTCCAGTTTTAATGAACGGCACTCCTATTAAGGCCAGCAAAATCACCAGTAGCATCACAATTACACCGGCCACTTCCCCAATCCCAAGGCCTTCGCAAATTACAATCCCTGTAGAAACAGTCCGAAGACCAGGCCCGACCAGAATCCCTAAACCGAAAGCTTATAGTGGAACTAAATTGACGAGCAGCACTGTCAACAATGTAGGCCCATGTAAAACCCCACCTCAGAGCCTTCTTAAGCCAGCGAAAGAACCCACTATGAAAAATGGACCATATACAAATATGGCAAACCGTTCAGCCCTTTGACATGGCATGCCCTCCCTACGACGGAAAAATCAAATGCTTCctaaaaaaatccataaaaagttatttttgacaagttattataaaatgttacaatggtGCTCCTTTCCATCCCACACAGGTTGCTTCAAGCAGATATTTCTCTCAATGGTCATGCATAAAGATATCATGGCTTAGtagtttaaatgttatattattataaggGTTATTGTGTAATATACAGAATGTAGCACAAAACCTAGGCCACAATGTAACTGGCATAAGGGTACATGTTTTTAAGTGCTTTCAATCCCAAAAGCTTTGCAGTTCAATAAAACACTAagtttttaaaagaatattaaaaaaataaaaataaagattaatgttTCCAAAGACTATTGCTAAATTCAGCTCTAGGTTTAAGTCTTTAAATGTTATCTGCCTGCAACATAGTGTCTCCTAtataatatttagaaaataatatttttcactgttgtaacaaattcattaaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014395 True 3491 mRNA 0.46 2 12729727 12739665

Neighbor

gene id symbol gene type direction distance location
AMCG00014389 NA coding downstream 3083 12721742 ~ 12726644 (-)
AMCG00014391 il1rapl1,LOC106575569,LOC106574938,LOC105023742 coding downstream 530537 12197039 ~ 12199190 (-)
AMCG00014390 il1rapl1,LOC100693228,LOC101468878,LOC102196907,LOC101172314,LOC107381071 coding downstream 725918 11984073 ~ 12003809 (-)
AMCG00014384 NA coding downstream 833844 11893760 ~ 11895883 (-)
AMCG00014386 LOC106575503 coding downstream 838254 11882495 ~ 11891473 (-)
AMCG00014396 filip1l,LOC100693076,LOC102213048,LOC102798342,LOC101473988,LOC105027992 coding upstream 38818 12778483 ~ 12780838 (-)
AMCG00014397 NA coding upstream 110342 12850007 ~ 12875536 (-)
AMCG00014398 NA coding upstream 167739 12907404 ~ 12982495 (-)
AMCG00014411 impg2b,LOC108432621,LOC107704545 coding upstream 435546 13175211 ~ 13203807 (-)
AMCG00014408 NA coding upstream 469080 13208745 ~ 13237528 (-)
G69759 NA non-coding downstream 849271 11879097 ~ 11880456 (-)
G69743 NA non-coding downstream 958334 11769690 ~ 11771393 (-)
G69539 NA non-coding downstream 1908655 10815771 ~ 10821072 (-)
G69536 NA non-coding downstream 1933538 10795883 ~ 10796189 (-)
G69535 NA non-coding downstream 1936581 10792919 ~ 10793146 (-)
G69849 NA non-coding upstream 230588 12970253 ~ 12970555 (-)
G69896 NA non-coding upstream 345698 13085363 ~ 13086345 (-)
G69950 NA non-coding upstream 562259 13301924 ~ 13302379 (-)
G69973 NA non-coding upstream 564761 13304426 ~ 13375879 (-)
G70034 NA non-coding upstream 883450 13623115 ~ 13623381 (-)
AMCG00014374 NA other downstream 1062190 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 1592641 11125029 ~ 11137086 (-)
G69537 NA other downstream 1931580 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 2668497 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 2711976 10001134 ~ 10017751 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 347943 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 3982408 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 4707203 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 4849602 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 5250986 17990651 ~ 18022095 (-)

Expression


Co-expression Network