AMCG00014405


Basic Information

Item Value
gene id AMCG00014405
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13240840 ~ 13245634 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014405
ATGATACGAGTGgtcCATTTCAAACATAGATGTCCACAGACATCTACCATTGCTGGTAGGCAGGGAGGCTGGTTTCTGAGATGGGGCCATCCTTCGCAATCCTGCCGAATGCTCTCCACAGCCTGGGCACTGAGGAAAGAGGTAGTCCAGCCCAGTAGTAGTGCTGCAGACAAACTGGACCTGGATGCCTGGAAATCAGTGATGAAGTCAGGCAGTGAATATGAAGATGCTCTAAAAGAATCAGAGGAAGATGGCGAGGTTTCCCCTCTGCAGGCCACAAGAGAGTTGGTGCAGATGTGGCGGCAGGCGGGAAAGCTGGTGCCAGAGGAGATAACCGAAGAAGAGCTCCAGACTCTTATGGAACTGTCCACCAAGTCCTCCAAAAAGAGGTACCTGAAATATCTGGCTATTAAGGAAGGTCACAAGAAATCCAAGAAGGCTAagcaggagaagaagaaaaatgagaAGGCCCTTGAGGCTGCCAGTGGGAGCGcaggggaggaggaagaggaagagcagAGCAGAGGACACTTCAAGAACACGTTCATGCTCCAGTTCTGGCAGCGCTCCATGGATATGGGGTATAATTGGAGGGCTGCCCAAGCTATGCAGTTTGGGCAACCACTTGTTTTTGACATGAGCTATGATCAAAATATGCAACGGCGGGAGATTGAGAACACTGTCTCCCAGCTCCTGGAGTCTGAGGGCTGGAACCGCAGGTCTGTAGACCCCTTTCATCTCTACTTCTGTAACTTGAAGCCAGAAGGAGCCTACCACAGGGAGCTAGTGAAGCGTTATGGCACAGCCTGGGACAAAATATTGGTGTCCACCACGGAGATGCAGCATGTGCAAGTGTTCCCCAGGGACAGGCTAGTGTATCTGACTGCAGACTCCCCAAATGTGTTACGAGCCTTTGATCATAACAAAGTGTACATTGTGGGCTCTATAGTCGACAGGTCTATCCAGACTGGCTTGTCACTGGCCAACGCCAAACGCCTCCAGCTGGCTACTGCCCGACTGCCCTTAGATGAGTACCTTCAATGGGAGATGGGTGCCAAAAACCTAACACTGGACCAAATGATACGCATTTTAATGACACTCAAAGACAGTGGAAAATGGGAGGAAGCTCTGCAGTTTGTTCCCAAGAGAAAACATGATGGATTTTATGAGCAACAGCCACAGCAGAAACCGCAAAGGGGGAATTATGCAGGTGCTCCTCAGAAAGGCAGGACATATACTCGTCAGGAGGACCCCAAACCTAGAGTACAAGTCAATTTGAAAAATCGCAAGTTTGGTGGAACCAATTCCAGTCGAAAGGAAAAGGAGAATTGGTGGGAAATTAGTTAGGCTTATTCACGCAGACAACAGAATTTAGTTCAGTACTGAGTTACATAATGCAGTTAcagtctggtagaaggaaatcAGTAGAATGTTCAGAATTTTTCAGCATGTGTATAATGTGAatatttaggaaaataaatccttcaGCTCATAGTTTCTTAAATCTAAAAGTTATTTCTGGAGGATTCAGGGGAATGGTTCTTAACTTTCATGCAAATGGAAAAAGAGGAATAGAGAATATTATCTGctatgtcattattatttggCTGCATAGCACATTGTGTGTCTTGAATGTTTTACATGTAACTGTTCCAATTAAAAATGGCTTCTGGAAAGCAATGTAAATGGGAAGAATATTAACGTTCTAATTGACATTAGACTGATAAAGCACATTCATACAAATGATGATCAGTATTACTCTGTTCAGTGCTTCTGGTTTTTGCTATTGCCTTTGGGCATGCATTAAATGGCACACACCCTTTGTGAATATGAAATAGCCACGAGTGTGCATTTACACTTATAAGAAATCATGAGGATTGGTGATGGGTGATGGGTATTATTGATCAGCAATTAAATGCCACCTCTACAACACATTGCTATAAACAacataaactaaatacaaacaaagccacacatttgtaaatgtttatctTAAAACCACATAACTAATGAGAAGAaccaaatatcaaatatatgtGACTTGAAGGCAGAGCTAAAGCAGTTTTTCCATGGTCTGG

Function

GO: NA

KEGG:

id description
K17654 TRMT10C, MRPP1; mitochondrial ribonuclease P protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014405 True 2078 mRNA 0.44 3 13240840 13245634

Neighbor

gene id symbol gene type direction distance location
AMCG00014406 NA coding upstream 730 13239073 ~ 13240110 (+)
AMCG00014401 tfg,LOC102777061 coding upstream 174863 13057865 ~ 13065977 (+)
AMCG00014400 NA coding upstream 199896 13029886 ~ 13040944 (+)
AMCG00014399 jagn1,jgn1a,LOC106574769,LOC105027989 coding upstream 225186 13009705 ~ 13015654 (+)
AMCG00014403 NA coding upstream 261731 12978471 ~ 12979109 (+)
AMCG00014414 NA coding downstream 20383 13266017 ~ 13274303 (+)
AMCG00014417 NA coding downstream 30939 13276573 ~ 13284294 (+)
AMCG00014416 NA coding downstream 45695 13291329 ~ 13301873 (+)
AMCG00014415 eed coding downstream 77733 13323367 ~ 13331090 (+)
AMCG00014419 NA coding downstream 94553 13340187 ~ 13360020 (+)
G69833 NA non-coding upstream 258406 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 640527 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1456757 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1518073 11719318 ~ 11722767 (+)
G69681 NA non-coding upstream 1599388 11641083 ~ 11641452 (+)
G69959 NA non-coding downstream 88580 13334214 ~ 13335185 (+)
G69961 NA non-coding downstream 106699 13352333 ~ 13380404 (+)
G70054 NA non-coding downstream 449181 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 921812 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1221070 14466704 ~ 14467744 (+)
AMCG00014345 NA other upstream 3088927 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3232192 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5758280 7464503 ~ 7482560 (+)
G68848 NA other upstream 5824246 7413640 ~ 7416594 (+)
G68830 NA other upstream 5891373 7346195 ~ 7349467 (+)
AMCG00014407 LOC107725344 other downstream 675 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 409604 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 943930 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 1056813 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1976280 15221914 ~ 15242333 (+)

Expression


Co-expression Network