AMCG00014419


Basic Information

Item Value
gene id AMCG00014419
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13340187 ~ 13360020 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014419
GGGGTTTATATTCATGGACTTGGGACCTTCACATGGTCTCAGCAGAAGATTGATATGGGAAATAAGGTTATTTTAATTCAGAGACCAATATTTCAACTGTCTGAAAAGGTTTCCCAAAAGCATGGCTTAAAGCAGGTCAAGATGCTTGCGGCAGGCGACGTGCCGGTGGTCCCTCTGAACTACACGGCGCTGTCATGGGGGACCCCATTCGATCGGGACACAGTGGAGCGCTGCATACATGagactctgctgctgctgtaccGCTGCATTGCATCCCAGCGCAGCACCCACTTCAACTTCCACGGCATCGGTGTGCTGTCTCTGCGCCAGGGCACCGCCAAGATGAGGTTCTACAAGGACTTTCTCAATGCCATGGATGGCAGTGGCAACCTCACACAGGCCTTCCTAAATTTGAGGGAACCATCCAGTGAACAGGGAATGCAGCCGATCACAGAGGAGCGAGTGACAGTGGATCAGGAGCAGCACAAGCTCCCCACTGAAGTCGCCTCTCCCAGACCCCTGGAGTCAGCTGTTACGGAGGCGCAGGGCCCTAGAGAGCCACAGGAGATGAGGCAGAGGATCCGCAGACCGGCGCTGCAGCCGGGTCGAGTGACTGGAATCAGCATTCACGAGGAGCTGGACAGGAGTCTGATGCCCACCACAGCAGATGAGAGGCAGGCAGACAAAGGgCGGAGACTTGGCTTTTCTTTACCATCTCGGGGTCATGTCCCTGAGCTGGAGCAGAAGGCAAACACTCTCCTGGTGTCCAGTCCTCCCGTCCCCCTGGGCTCTGAGTGTGCTGACCATGACCATGCAGGACAGGTGAGTACCAGTGGCAATAGGCTGTGCTATGAAGAGTGCAGCAGTGAGACGTGTGGCAAGCTAACGTCCTGTATCATCCAGGAGCTGTGCTACGTGTGTATGCAGAGGGCCCAGCGCAATGTGCCCGTCTACCTGagtgaggagaggaggaggcaggAGAAGGAAGATGAGAGACTGCTGATGCTCCACCAGCAACAGAAAGAGCAAGAGGAACTGCAGAAAGAGCAGGTCCGACTGCCACCCTGTCTCTTGCCCATCACTGACATCTCAAGGATAGCTGGACTACAGGAcaccagagaaaaaaaacaggagattGCTGCGTTCAATCTGGGCGTCTCTGAAGCTACAAAAGGGAGGAAGCCTGCGAGCTCCATGCAGGTTCATAACTCCTACATCTTCCAGAATCGGCCCCCGACACCCCCCCACCAGCCCAAGCAGCGGCGCTACCTGCAGGAGCTGAGCGAGCAGATCAGCCAGAGAAAGGAGACAGAGGCCCAGGGGAGAAAAAGCCAGGAGCTCAGAGATCATCTCCGACAGGTTCAGCTTGCTCAGGAAATTGCAGCCCTGAAGGAGCAGAATTGGAAGAAGAAAGCTGAGCAAATCCAAAACTACCACAAGGCATTGGATATGCAGGTGAAGGTAAAACCATCAGGTCTGCCCGCCTGCGAGTCAGATTCAGAGGGGCTCATCTTTGGGGCCTTCGACTCCTCCAACAAGAATCTGCAGGAGCAGAGGAAGCGTGCACACCAGCTGTACCAGGAGCAGCTGGAGACGGCCACCCAAAAGAAGAGAGAAGCACTCTTCAACCACATCCTGGAGCAGAAGAAGGAGCAGGAGGTGCTCAAAAGGACCAGGAAGGAGCTGGTAGCAGATCGGATCGCTCGCCATGAGAAGCTCCACAGCATGCGGGCGTCTCTGGAAGACAACTGGGCCCACAGCGCCGATGCCAAGTGCTTTagagaacaggaggagcacAGTTTTATCAGAAGGGGTTTCCACAAAGGATCTCCAGCTGCCAAAACTGGCCACAGATACATCCAGTGTGGCCCCGATCCCGAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014419 True 1884 mRNA 0.55 11 13340187 13360020

Neighbor

gene id symbol gene type direction distance location
AMCG00014415 eed coding upstream 9097 13323367 ~ 13331090 (+)
AMCG00014416 NA coding upstream 38314 13291329 ~ 13301873 (+)
AMCG00014417 NA coding upstream 55893 13276573 ~ 13284294 (+)
AMCG00014414 NA coding upstream 65884 13266017 ~ 13274303 (+)
AMCG00014405 NA coding upstream 94553 13240840 ~ 13245634 (+)
AMCG00014418 NA coding downstream 1728 13361748 ~ 13371376 (+)
AMCG00014420 NA coding downstream 90078 13450098 ~ 13451219 (+)
AMCG00014422 NA coding downstream 230900 13590920 ~ 13615018 (+)
AMCG00014421 NA coding downstream 270647 13630667 ~ 13650074 (+)
AMCG00014424 NA coding downstream 384101 13744121 ~ 13747498 (+)
G69959 NA non-coding upstream 5002 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 357753 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 739874 12600104 ~ 12600313 (+)
G69739 NA non-coding upstream 1556104 11783865 ~ 11784083 (+)
G69722 NA non-coding upstream 1617420 11719318 ~ 11722767 (+)
G70054 NA non-coding downstream 334795 13694815 ~ 13696871 (+)
G70221 NA non-coding downstream 807426 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 1106684 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1819825 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1990622 15350642 ~ 15430852 (+)
AMCG00014407 LOC107725344 other upstream 88455 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3188274 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3331539 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 5857627 7464503 ~ 7482560 (+)
G68848 NA other upstream 5923593 7413640 ~ 7416594 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 295218 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 829544 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 942427 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1861894 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 2315611 15675631 ~ 15685899 (+)

Expression


Co-expression Network