AMCG00014430


Basic Information

Item Value
gene id AMCG00014430
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13531195 ~ 13536369 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014430
TTATCAGCTGCTTCTGCTTTGGTGGTGAAGATTCCCCAGGTTACATACGAGGCTGCAAGGGGAGACAATGTGACCATTCCTTGCACCTTCACCTCAAGTGTTCAAAATAGAAAAGCTCTAATTGTCCAGTGGACACGTCTCTCTAATGACCCGATTATCCCTGGGgtgagtgtaattgATTATTACTGGCCTGGTACCAGTGTTGATGTAGCTGAAACTTATGATGGCAGAGCTGGCCTAGTAGGCGATCCTAACACTGGAGATGCTTCCATATACATTAACAGACTGACAGTGGCAGACAATGGAGTGTACGCATGTACTGTCAGTATTCCAAGTGATAAAACAGGAACACCTCAAGCCACAACAAAACTAGTTGTGTTGGTTGCTCCATCTAGGCCTATCTGCAAAATTGTGGGAACAGCAGAATATGGACAGAATATCAGTCTGACATGCGTCTCTGAAGAAGGCTCCCCTGCGCCAACCTACAAATGGACTTCCTATGATGTCAAAAACTTACCAAGGGCAAACCCACCAAAATCTACCGACCAAAATGGAGTTCTGTCCCTGGTCAATGTTTCAATTGACACATCTGGATACTTCATTTGTAACTCGCAAAACAAAATCCGCTCTGCTTCCTGCAATATTACTCTAACTGTATTGCCTCCTTCCATGAACATTGCAACAACCGCTGTGATCATTGCTGTTGCTGCGGTTGCAGTCGTTATCATTGGAATCATCGcgtactgctgctgctgccgcaaAAAGGGGGAGCCCCAGGAGTACCCCATGGTACCTCCTCCAGAAGGCATGGAGTATTCTGATGCGAACCCAGAAAAACACCAGCCCCAGAATGGCAGGCCGTATCATGACGATCACTGGGATGAGGAGAGTGAGCGGCGAGGTACTCCTGTGGTCCCTCCTAATAAACCTCGAAGAATAGACTATGAAGAC

Function

GO: NA

KEGG:

id description
K06790 GPA33; cell surface A33 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014430 True 951 mRNA 0.47 6 13531195 13536369

Neighbor

gene id symbol gene type direction distance location
AMCG00014438 NA coding downstream 3593 13498726 ~ 13527602 (-)
AMCG00014432 NA coding downstream 43582 13478348 ~ 13487613 (-)
AMCG00014434 LOC106575972 coding downstream 58024 13443270 ~ 13473171 (-)
AMCG00014437 me3,LOC108426042,LOC107748144,LOC107595810,LOC107756775,LOC107695468 coding downstream 122619 13377662 ~ 13408576 (-)
AMCG00014409 rpl24 coding downstream 265646 13262379 ~ 13265549 (-)
AMCG00014429 NA coding upstream 160966 13697335 ~ 13709287 (-)
AMCG00014428 NA coding upstream 192334 13728703 ~ 13742819 (-)
AMCG00014436 pcid2 coding upstream 248546 13784915 ~ 13790135 (-)
AMCG00014435 NA coding upstream 292086 13828455 ~ 13846485 (-)
AMCG00014431 adprhl1 coding upstream 316793 13853162 ~ 13864850 (-)
G69973 NA non-coding downstream 155316 13304426 ~ 13375879 (-)
G69950 NA non-coding downstream 228816 13301924 ~ 13302379 (-)
G69896 NA non-coding downstream 444850 13085363 ~ 13086345 (-)
G69849 NA non-coding downstream 560640 12970253 ~ 12970555 (-)
G69759 NA non-coding downstream 1650739 11879097 ~ 11880456 (-)
G70034 NA non-coding upstream 86746 13623115 ~ 13623381 (-)
G70063 NA non-coding upstream 158388 13694757 ~ 13696971 (-)
G70091 NA non-coding upstream 222857 13759226 ~ 13761420 (-)
G70094 NA non-coding upstream 233808 13770177 ~ 13772272 (-)
G70169 NA non-coding upstream 383152 13919521 ~ 13921330 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 397444 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 1863658 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2394109 11125029 ~ 11137086 (-)
G69537 NA other downstream 2733048 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 3469965 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 3185704 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 3910499 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 4052898 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 4454282 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 5665434 19201803 ~ 19203567 (-)

Expression


Co-expression Network