AMCG00014432


Basic Information

Item Value
gene id AMCG00014432
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13478348 ~ 13487613 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014432
TGCGGCTCCCGGTCACATGACGCACCTGTCTCTGGGCGGGTCAGCGATGCGTTCCTGCCGGGGAGGCGCACTGTGAGGAGGCGTCCGGGCCGCGACACCGCTGGGGCTTTCTTTTCATCTCcttttgtttaagaaaagtctagctttttgttattttcacagAGTAgactacagaaaaacacatacgCAAATGCTGTGCTCGATAAAgaagaattattttttaagtgagaTGTGAGCATTAGGAAAACGCGCCGGATCGCAACACTTCCTTGTGGATCTAACAACACAATGAGGAATTCAATACTGGCTGCCTTTCTGCTGGGGCTCCTGCCGACAGGGATTCTGCCTGTCCAGGTGACTGTACAGGATTCGTTGCGCAAGGTCACCTTGTTTGCTTCGATCACTCTGAAGTGTGATTATTCAACCTCTGCCAACCTACAGGATGTCCTGGTCACTTGGCGCTTCAAGTCCTACTGTCAGGACCCGATCCTCCAGTACTTCTCCACAGCATACCAGGCCGCCCAGTCCTTGGGCCAGGACCCTACGAATGATTGCCCGGACAGCATTCGAACGGTGAGGGTGGTAATCCAGAAGAAGGGCTCCAATGAACCCACTCTGGGCACAGACTACAGCCAGCGGAGAATCACCATCCAGAACAAGGCTGACCTGGTGATTCAGGAAGTGATGTGGTGGGACAATGGTGTCTACTACTGTTCCGTCTACGCTGCAGGTGACACCAGCGGCAATCCTGAAAATTTTGTGAAACTCATCGTCTATAACTGGGAGGTGGTCATCTTCATTATCCTCGGCTTCCTGCTTTTGCTCATtctcctgtgtgtctgctgGTGCCAGTGCTGCCCTCAGCGCTGCTGCTGCTACGTGCGCTGCCCCTGCTGCCCCACCAAGTGCTGCTGCCCAGAGAAAGCTGTGATGCGCTACAAGATGATGAAGGATGCTCAGAAGGCCATGTCCCAGTGGTCATACGGACAACCTATTTATGCACCGATGGGCTCCAAAGCATCCTCCCAGCACCCCTTGCTCTACACAGATTATGGtatgaaacaaaacatcccTTTGACAGCcatgcctcctcctcctcctcctcctcaaccTCTCTATCCTGGCAACAACCCCAACCATGTCCTGGACTACATCGAGAACCAGGTGAGGAGCATGGATTCAGGCACCCCACAGATGCAGGTAATGCAGTACCAGCCACAGCAGCAGCTGCCGCCCCAGTCCGTCATGGGCCAGCCAGTGCCCTTTCCCCCTGGCCCTCCCAGCATGATCTCCTCTCTCAATGACATTGGCGTGCGTGAGGTGGACCGGCGAGTCATCCACCTGCCGCCCATTATGGAGAGGATGCCTGATTCCTCACAGAGGACCCCTGCAGGGCCTAGGGGGCTCCACCCAGGTGGTGGGGGAGGCCGGTCCAGCAGTAGCTCAGCAGCCACAAGCCGCAGCCAGCAACGCCCAGGGTCATCCAGGAACCACCAGCCGCGGAGGGACAACTTTGAAATGGGTCGGCCTGTTCCTCGGAGGGACTTCTCCCCCCCGCGCCGCAGCGTCCAGCACGGCTACAGCGATGATGAGTCCAGTTACAATAGCCGGAGAGGCCCCAGGCCAGCCAGGGGGGGGCACCACAGCAACGCGAGCAGCAGAAGGGAGGGCCGGCTCCGGTCCAGGAGCCGTGATGACCTCATGGAGGATCTGCGGCGCCCCCCACGCAGGGACAGGAGCTACTCCCCAACGCCACGGAGGGACTCGGTGAGCTCGGAGGACGAGGACAGCAGGAGAGGCGCGCGCGGCCACAGGCTCTGGCCTGAGAAGCCACCCAGCTACACCTCCATAGAGATCCAGCCCGGGAGGGCCCGAAACGGGGCTGTGCTAAACGCCGAGCGATACTCTGACAAGAGTTCCCGCAGTGGCAGGAGTATGGTGATATAAAACCAGTCTCTATATCCTGCCCCAATGTTGCCTattgaaggaagaaaaagaaaacatgttttaaacatttcttattttttattgtttgcacAATATTCTATAGAAGTCATAAGAGATGCTCTTTGCTCTAGATACCTGCCTGTGGCTATTCTTTCTTTCCACAAAGCCTTGAATTTAAGTATTTGAAGGCTAAGCTTCACTGGAGTTTTTGCTGTGTGGTGCGGGGATCAACTCTGGGATTGAACATTTAACTGCATCTGCAGTGTCAACTCTACCATTGCGCCCTCTTGTGGATGTTCTCCCACATGGCAGTGAATACATCCTGATCAGCAAAATGCGCCTCAGTTGCAGAGACCAGGCCTTGCAgtcaaaaacagcaacagtgaATTAAATTTTGTCTTGGCTGCCTCTGCTGGCCTAAAATGAGGACTTTATGCAGATTTTATGTATAAACTAGTaatgcaaaaaaacagcaagatgAAAACCCACAAGGTAATTTTCATTCATTGGCCAGTCTCCCACCGAGGAATGAAAGTGTCCTGAGATAATCCAATGAAGGTTTTGGGAAAGTAACTAATGTGATGGATATTTTTTAGTTtagattttataatttataatttttaatgttatacttTTACTTGTATGCTACCTTTAAGTGCTATTGTGCATGTGGACGTTTATAATGTAGGGAACTAGCACATTGAGGGCCTGCCATTGAAGTTAACTACATTCAGGTAATGTACTGCTTTACAGTAGTTTTGTTCATGCTTTCTGATTCTTCCATAGAAATGCAGTTCATTAGATAGAAGAGGATATTATATACAGGGATAGTGGCATTGTTAATGAAAGGGGGACCAGAGTGTTTCAGCAGCAAGAATTTATTACTCCGAAAACGTTTGAAGTCGTTGTTCATTCTATAGTTAGCTTGTACTGTAATTTGAATGCatctttgtgtgtatgtatatatgtattgaaGGTATGAAGATCATTATGTGCTCATTCTGCAGCTACTGAATTGTAATGGGAGaagaattaaaaagacaaagcagaagtgaaagctttttagttttgtatgaAGCTGTAATAATTGTGCTTATAATTCTGTAAGCTTTTGATATTTTATCTAGATCATTTTGTTATTGGGAAGAATtggtaaaatgaaaaacaatgtgcaaataCACTTCACATGCTGAAACAATTGTAgttttctcaaaacaaaatgtcctttgtcatgatttttttttttggacaatatatttgtaatgctcttatttatattattacaagGTACCAGACAttctctgtatttctctttAGTTACTGTATTCACAATTCGATATGATCTTTCTTagtgattttaatgtattgcagccaaatacaataattttgtAAACTGATCcaaatgtgtaataaaagcCATTGTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014432 True 3373 mRNA 0.48 8 13478348 13487613

Neighbor

gene id symbol gene type direction distance location
AMCG00014434 LOC106575972 coding downstream 5177 13443270 ~ 13473171 (-)
AMCG00014437 me3,LOC108426042,LOC107748144,LOC107595810,LOC107756775,LOC107695468 coding downstream 69772 13377662 ~ 13408576 (-)
AMCG00014409 rpl24 coding downstream 212799 13262379 ~ 13265549 (-)
AMCG00014410 NA coding downstream 217359 13251935 ~ 13260989 (-)
AMCG00014413 txnl4b coding downstream 235696 13241826 ~ 13242652 (-)
AMCG00014438 NA coding upstream 11113 13498726 ~ 13527602 (-)
AMCG00014430 NA coding upstream 43582 13531195 ~ 13536369 (-)
AMCG00014429 NA coding upstream 209722 13697335 ~ 13709287 (-)
AMCG00014428 NA coding upstream 241090 13728703 ~ 13742819 (-)
AMCG00014436 pcid2 coding upstream 297302 13784915 ~ 13790135 (-)
G69973 NA non-coding downstream 102469 13304426 ~ 13375879 (-)
G69950 NA non-coding downstream 175969 13301924 ~ 13302379 (-)
G69896 NA non-coding downstream 392003 13085363 ~ 13086345 (-)
G69849 NA non-coding downstream 507793 12970253 ~ 12970555 (-)
G69759 NA non-coding downstream 1597892 11879097 ~ 11880456 (-)
G70034 NA non-coding upstream 135502 13623115 ~ 13623381 (-)
G70063 NA non-coding upstream 207144 13694757 ~ 13696971 (-)
G70091 NA non-coding upstream 271613 13759226 ~ 13761420 (-)
G70094 NA non-coding upstream 282564 13770177 ~ 13772272 (-)
G70169 NA non-coding upstream 431908 13919521 ~ 13921330 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 344597 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 1810811 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2341262 11125029 ~ 11137086 (-)
G69537 NA other downstream 2680201 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 3417118 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 3234460 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 3959255 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 4101654 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 4503038 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 5714190 19201803 ~ 19203567 (-)

Expression


Co-expression Network