AMCG00014442


Basic Information

Item Value
gene id AMCG00014442
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13944780 ~ 13965123 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014442
CATTTCGCAAAAAGACGGAAATCGGCATTGGGAATCACGATTGCTCTCTTGGTCCTCTCTGTCATCATCCTGGTGGTAGGGCTGGTGTCAGCCACGCGGGCGGAGAATGTGACCATCGCTGGCTATTACCCAGGGATCGCTCTCAGTTTTGGTGCTTTTCTGGGGATCGTGGGGATTAATCTGGTGGAGAACAGAAAACCAATGCTGGTGGCTTCCATAGTTTTTGTCAGCATCGGAGTCATCGTTGCATTCTTCTGTGCTATAGTGGACGGAGTCATTGCGGCAGAATTCATAGATAGAAGGCCCCTGACTGAAGGAATGTGCCAGTTTTATGCCAGTCCTGGAAAAGCTTATGACAACTACCAAACTGAGGTCACCTGCCCTACCTATGGCAACAGAAAGTGTAAGATAAGGGTGAGAAGTAACACCTGTTACTGCTGCGATCTGTACAACTGTGAGAGCCTTGAGAGCAATGTGCAGTATTATGAGTACACTGGCGTCAACAGCTGCATGGATGTGATTCACCTGTACCGACTGCTGTGGGCCTGCGTTGTCCTCAACGTCGTGGCGCTGTTCCTGGGCATCATCACCGCGGCCATACTGGGAGCCTTCAAAGACATAACACCTGCTGTCCAGACCATGCAGAGCCCTGCTCCTCCTCCCCACATCCTCTACAACCCAACCCAGCATGTCCTCACCTACGCAGGTTTCTGCCCCTCCGGACAGACCCTGCCTGCATATCCCAACTACCCACTGCCTCTGCAGcatcACAGCAACTGTCAGCCCCCACCCCCGTCCTCTGACGCCGCCATGCCCGAAGAGAGCCAAATCCCATCGCAGGCCTCATCCAGTTACATGCTGACGCCCAACGCTCCAGCTCTGTACGGACCTGCTTACAACCCTTTAGAGAAGCCACCTCCCTATGCCTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014442 True 933 mRNA 0.54 8 13944780 13965123

Neighbor

gene id symbol gene type direction distance location
AMCG00014441 grk1,grk1a,LOC107748333 coding upstream 5675 13930882 ~ 13939105 (+)
AMCG00014440 tfdp1,LOC108266453,LOC108426071,LOC107597491,LOC107748134,LOC107673714 coding upstream 23450 13905849 ~ 13921330 (+)
AMCG00014439 LOC107748345,LOC107577958 coding upstream 41125 13882719 ~ 13903655 (+)
AMCG00014427 NA coding upstream 117229 13820356 ~ 13827551 (+)
AMCG00014425 cul4a,LOC102780633 coding upstream 130901 13791149 ~ 13813879 (+)
AMCG00014444 tpp2,LOC107665822 coding downstream 120389 14085512 ~ 14105494 (+)
AMCG00014443 NA coding downstream 173283 14138406 ~ 14143073 (+)
AMCG00014445 cpox,LOC107717573,LOC107585846,LOC107657924,LOC107550392 coding downstream 186176 14151299 ~ 14157726 (+)
AMCG00014446 NA coding downstream 195513 14160636 ~ 14160842 (+)
AMCG00014447 NA coding downstream 197002 14162125 ~ 14163322 (+)
G70054 NA non-coding upstream 247909 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 564376 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 609595 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 962346 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 1344467 12600104 ~ 12600313 (+)
G70221 NA non-coding downstream 202323 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 501581 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1214722 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1385519 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 1485655 15450778 ~ 15451268 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 255592 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 693048 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3792867 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 3936132 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 6462220 7464503 ~ 7482560 (+)
AMCG00014456 NA other downstream 224441 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 337324 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1256791 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 1710508 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 2164356 16129479 ~ 16139032 (+)

Expression


Co-expression Network