AMCG00014444 (tpp2,LOC107665822)


Basic Information

Item Value
gene id AMCG00014444
gene name tpp2,LOC107665822
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14085512 ~ 14105494 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014444
CTTTACTGCAGATTCAGAGGTAACACGCCACCTTGAAagatatttctgtatttgtgggTTTGGTTGATTTCTTGATTTTAAGGTCTTTCTACCCctttgaagaaaaatgtaatttttctcttgttttccgATACTCCGTCTTCACTACTACTCTGACACTTTGGGATCTTAGATTAGAGGGATCCTACCTCTGGAAGGCTTGAGGAGTCTTCAAGGGGATTGCACGTTACATTTTTGAtattatgttcttaatattttggttattgttttaaaaaggtgttAAGTAATTTCTACCTATTCAGAGGGTTAGTGTTGAAGAACAATGTGCAGTTTTAAGTTTAGTGACCACTTTGCATTAAAGCAAAGTACCAGCAAAAGCTCCCCAGGTCATTCTTACTAGCTTCCTCTGAGCAAAACTTTCCACGACAGCAACTGAGCATTAAAGTCTGCCCTCTAGAggaaaaatgcatgtattactCTGgcaattaacaaacaaactggCAGAGCACAAAGCTCACCTTCAGTAGGCAATAACATATTGAATGAAACTctatttagatatatatatatatatatatatatatatatatatatatattgtagttttACTGGTATACGagttatgttataaataaatataatgtgtccacataatataaataacccCCACACACTGCCTGTACAACACACTCCACTATACAAACACTACTTTACATGTCATGGAGGTATTCAAAGCAGATCTAACCCTTCTCTCTTAAAGTTACTTTTGGCTGCAAATGGTGCATAAAGAAAACGACACTAAAGAGAGAGCTGCTTTCACTTTACtcacttttgaaaacaaaacaaaaaaaacatgtctgcagTGGATTTTAAACTCCATAAAAACAGAATGTCAGTGGGGATTAAATGCATTACTGTTCCTGTGttattttccattacatttttcctATTCAAATCAGTGGAGCAGCATTCCAGAGAAGTCAGTTCAATCAAATGCAATCACTGAAGTCTTctgcataattataataaaatactttaaaataaaaccacagaagGAAAGGGGTAGGCTATAAACAGCAGGCAGGCCAGGACAATAGAAAACAGTCACTGTCTCTTTAAGAATTTCCTCAGACCCATGCTCAGTGTGTGCTGGCTTCGGTCTTTTTCATTTCTGCTCttgcttgttgttgttaatCATCGTCATTTTGTCTGGTCATGGCTGCTAATTGTATTGAAGATACGTTCCCTTTCCACGGACTTCTTCCCAAAAAAGAGACCGGAGCTGCGTCTTTCCTCTCCCGCTACCCGGAGTACGATGGCCGGGGCGTCCTCATTGCGATCCTCGATACCGGCGTCGACCCAGGGGCCCCGGGCATGCAGatAACATCTGATGGGAAGCCCAAGATAGTGGACATCATTGACACAACAGGCAGTGGAGATGTGAACATGTCTACAGTGGTGGAGCCTAAAGATGACATCGTTCTTGGCCTGTCAGGGAGAACACTCAAGATTCCCACAACATGGATAAATCCATCAGGAAAGTATCACATTGGTGTCAAAAATGGCTATGAGTTTTTCCCAAaagctctgagagagagaatacagAAGGATCGCAGGGAGAAGCTGTGGGACCCGGCCCATCGCGCGGCACTGGCTGAAGCGTGCCGGAAGCAGGAGGAGTTTGACAGCACGCACACCACTCTCTCTCAGATGGACAAGCTGTTCAAAGAGGAGCTGCAGAGTCACACTGAGCTGCTGACGTCCCTGGAGAAGAAATACAGTGACCCCGGGCCGGTGTATGACTGTGTGCTTTGGCATGATGGAGTGACATGGAGAGCGTGTGTGGACACCTCTGAGTGTGGTGATCTCAGCGGCTGTACGGTGCTGCGGAGCTACAGAGAGGGTCAGGATTACGCCTCGCTGGGCAGCTCTGAAATGCTCAACTATTCGGTGAACATTTACGACGAAGGAAACACACTGTGCATCGTGACCAGTGGAGGCGCCCATGGCACCCATGTAGCCAGTATCGCCGCAGGATATTTCCCAGAGGAGCCGGAGAGAAGCGGAGTTGCCCCAGGGGCTCAGATCCTGGCCATCAAGATTGGAGACACCAGACTGAGCACCATGGAGACTGGCACTGGCCTCATCAGAGCGATGATAGAGGTTATCAATTACAAGTGTGACCTTGTGAACTACAGCTACGGGGAGGCAACACACTGGCCAAACTCTGGGAGAATTTGTGAGGTGATAAACGAAGCTGTATTGAAACATAATGTGATCTACGTATCCAGTGCTGGCAATAATGGCCCGTGTCTGTCCACTGTGGGATGTCCAGGAGGGACTACGTCTAGTGTGATAGGTGTTGGCGCCTATGTTACCCCTGACATGATGATAGCTGAATATTCTCTTCGAGAGAAGCTTCCAGCAAACCAGTATACCTGGTCGTCACGGGGACCCAGCACTGACGGAGCTCTGGGTGTGAGTATCAGTGCACCGGGGGGCGCAATCGCGTCCGTGCCCAACTGGACTCTGCGTGGCACTCAGCTCATGAACGGGACATCCATGTCTTCCCCCAATGCCTGCGGAGGCATTGCCCTGGTGCTTTCAGGTGTGAAGTCCAATGGTATCCGACCCACTGCAGCGGCTGTCCGAAGAGCCCTGGAGAACACGGCAGTAAAAGTAGAAGATATCGAAGTATTTGCACAGGGACATGGAATTATTCAGGTTGATAAGGCCTATGACTACCTCATTCAGCATGCATCCCTACCAACCAGTAATCTGGGTTTCACAGTGACTGTAGGAAACCAGCGTGGCATCTACCTCAGGGACCCTGTCCAGATCTCTTCACCCTCTGATCATGGAGTGGGAGTGGAGCCTGTCTTTCCTGAAAACACAGaaaacactgaaagaatATCCCTTCAGCTCCATTTGTCACTGACCTGCAGCGCTCCATGGGTGCAGTGTCCCTCCCACCTGGAGCTGATGAACCAGTGCAGACACGTCAATGTCAGAGTGGACCCCCAGGGGCTCAGGGAAGGACTCCACTACACAGAGATTTGTGGCTATGATGTAAAAGACCGGGCGACAGGTCCGCTGTTCCGAGTACCAGTGACGGTTATTATTCCCACCAAGGTTACTGAATCCTCTGGCTATGAAGTGCCTTTCAATGATGTGCATTTCAGACCTGGTCAGATCAGACGACACTTTATCACAGTTCCTCAGGGAGCCTCCTGGGCAGAGATCACGTTAACTTCACACTCGGCAGATGTGTCTTCGAAATTCGTCCTCCACGCTGTTCACCTCGTAAAGCAAAAAGCGTACCGTGCCAACGAGTTCTACAAGTTCTCATCCCTCCCGGAGAAGGGGGCCCTGACAGAGGTGTTCCCGGTCCTGCCAGGGAGGACCGTAGAGGTTTGCATCGCACGATGGTGGGCAAGCCTGGGAGATGTCACGATTGATTATTCGATTTCTTTCCACGGTTTGACCTGTTCTACCTCACAGCTTCACATTCATGCATCAGAAGGTATTTCTAGCTTTGAAGTGTTGTCCACATTGAAATATGAAGACATCTCACCAAGCATAAACCTTAAAAACTGGGTACAGCCTCTGAGACCTCTTAGTGCCAAGACAAGGCCTCTTGGATCCCGGGATGTTCTGCCAAATAATCGCCAgctttatgaaattattttgaCTTACAACTTTCACCAACCGAAGAGTGGTGAAGTGACCCCTAGCTGCCCATTGCTGTGTGAGCTGCTGTACGAGTCTGAGTTTGACAGTCAGCTCTGGATGCTTTTTGACCAGAATAAGAGGCTGATGGGGTCGGGAGATGCTTACCCTCATCAGTATTCCTTGAAGCTAGAGAAAGGAGACTACACCATACGGTTTCAGGTTCGCCACGAACAGATCAGTGAACTAGACCGCCTTAAGGACCTGCCCTTCGTCATTTCACACAGACTCTCCAGCACACTAAGTCTTGATGTGTTTGAGACTCAAAGGAATGCCCTTCTAGGCAAGAAGAAGGCAAACACCATAACTCTACCACCCAACTGCTCACAGCCATTCTTTGTGACATCCCTACCAGATGACAAAATACCGAAAGGGGCTGGACCTGGGTGTTATCTCACTGGTTCTCTCACAGTGCCAAAGAGTGAATATGGGAAGAAAGCAGATGTACTGCCCGTCTTTTACCATTTGATCCCATCGCCCAATAAAATGAAGAACGGTGgcaaggagaaggagaaggatggagaaaaggagaaggagaaggatgTGAACGAGGAGTTTGCAGAGGCCATAAGGGATCTGAAGATACAGTGGATGACAAAACTGGAGACCAACACTGTTTACGATGAGTTAAAAGAGCACTTTTCTCTTCACCTTCCTCTGCATGTGACACGACTGCATCAGCTAGACTCCGAAAAGGAGCGAATGAAGAGGCTAGGGGAGATCCTGGCAGCTGCAGACATCGTCATCTCCCACATCGATCAGGTGGCCCTGGCGGTGTACCTCACCATGAAGACCGACCCTAGGCCAGATGCGGCTTCAATTAAAAGCGACATGGAGAAGCAGAAGTCCTCGCTGATCGACGCACTGTGCAGAAAGGGCTGCGCGCTGGCGGACCAGCTGCTCCAGCTGCAGGAGCAGGACGGGGCCATCTCAGGGGAGGTGGGCAGCACCGAGGACGACCCCGAGGGGGCCTTTAAGAGCCTCGCCGACACCTTCTGGGACGTCCAGAAGTGGGCGGATCTTACCGACACTAAGgttttgaTGTTTGCTTATAAACATGCATTAGTGAATAAAATGTATGGAAGAGCCCTTAAATATGCGTCCAAGATTGTTGAAGACAAACCCAGCAAAGAGAACTGGAGAAACTGCATTCAGCTCATGAAGTCCCTTGGATGGACACATTGTGTGTCTTTTGCTGAAAACTGGCTTCCAGTTATGTACCCTTCAGACTTTACACCTTTTTAAAGACTACAAAATGCCATTACATATTGGGCAATTCCACACTTCACGAAGAGAATACTGTCCGaataaaatgtcttttttataTCTGTCAAGGATGCATTTGTCCCTTAACTCTAATAATTAAACAGTCGACCATGTTACAGTTTTAACTAGAATGTcaattttggtttgtttgtcagcattttgaacaaacacacacaatacccGAACGGTCCCTAATCATCAGTGATTAACTGAAAGGTGCAAACTTCTTTCACACTTAACTTGTTTTATGTTGACAAACCGGAAGGTCCTTAACTACAGCAGTGATGATATATGTTGAAGACGTGTTTACCAAATACTTTCAATTCTGTatgtttatttcagaataatCCTGAAAATGATATAGCACCTGAAATCTGTGACTTTACGATTCAGCAAAGTCCCCTAGAACTCAACCTTACCTTTTAgttgaatgtttaaaaagaaaaagaaaccagtTCTTCTGAAAAGTCCCTCCGTATCTGCACCTCACTGCAGACATCAAGGAGTCATTGTCCGAGTacttacaataaatatttaaatgtgcattaatatacatatttataacgTATAATAAGCTGAGCaagcatatttgtatttgttcagatTTAACACAATGTATGTAatttatgcatgtattgttttctgttttaagatGAGTTGTTAAATGGTTTCTGTTTCAAAACATGGAGCATCAGCATCAATACAGAGTCCGATCTCAGGCTTTCCACTGGTATAAAACTGCtgcattgaattattattttattataatggtttatttattatcagatgCCTTCACCCAGGGCAATTTAGGATGCTTTCATTTCACATGGAATTGCCCCTTTTTGCCCTTTtcccatttttgttgttgttctttataCAGTGCtgatggaaaatattttaataatttggatttctgttttataaagcatgttttattttataagggaatgcctttttaaaaatatatactgttcaGAATGAATAATAGCAATCTCACTGTAAATGCCATAGGTTAAATTTGCATGCTAGGCTCCCTAGATTCCTAGTTCAAGAGAGCGATCACATTTCTGtatataaattgttttaattcaacTGGCATTCAGGGTTTTACAGAAAATTCCAGTTAATAAGTTCTAAAACGGCCTTAAAATTCAAATTGTGCTGTACTCAATTGCTTCTGATGTTTGAACCCTGTGATTAAATATATCATAGTTACTTTTATTGTTACAACATACAAGAATGTTTTAGATTATTTATGAACTCTCTTATTTATAAAGTCACGGTAGCTAGagactatttttaaagaattgCATTGATTTTACACATAAGCTGATCATATTTTATGACAATTATTCCATAGCAGCAGatggaaaagttttttttttgttatgaagTCCACTGTATACAATTGtcacacaaaacata

Function

symbol description
tpp2 Predicted to enable tripeptidyl-peptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human TPP2 (tripeptidyl peptidase 2).

NR:

description
PREDICTED: tripeptidyl-peptidase 2 isoform X2

GO: NA

KEGG:

id description
K01280 TPP2; tripeptidyl-peptidase II

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014444 True 6420 mRNA 0.44 29 14085512 14105494

Neighbor

gene id symbol gene type direction distance location
AMCG00014442 NA coding upstream 120389 13944780 ~ 13965123 (+)
AMCG00014441 grk1,grk1a,LOC107748333 coding upstream 146407 13930882 ~ 13939105 (+)
AMCG00014440 tfdp1,LOC108266453,LOC108426071,LOC107597491,LOC107748134,LOC107673714 coding upstream 164182 13905849 ~ 13921330 (+)
AMCG00014439 LOC107748345,LOC107577958 coding upstream 181857 13882719 ~ 13903655 (+)
AMCG00014427 NA coding upstream 257961 13820356 ~ 13827551 (+)
AMCG00014443 NA coding downstream 32912 14138406 ~ 14143073 (+)
AMCG00014445 cpox,LOC107717573,LOC107585846,LOC107657924,LOC107550392 coding downstream 45805 14151299 ~ 14157726 (+)
AMCG00014446 NA coding downstream 55142 14160636 ~ 14160842 (+)
AMCG00014447 NA coding downstream 56631 14162125 ~ 14163322 (+)
AMCG00014458 NA coding downstream 118022 14223516 ~ 14235412 (+)
G70054 NA non-coding upstream 388641 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 705108 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 750327 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 1103078 12980259 ~ 12982434 (+)
G69778 NA non-coding upstream 1485199 12600104 ~ 12600313 (+)
G70221 NA non-coding downstream 61952 14167446 ~ 14171012 (+)
G70271 NA non-coding downstream 361210 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 1074351 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 1245148 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 1345284 15450778 ~ 15451268 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 396324 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 833780 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 3933599 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 4076864 10003058 ~ 10008648 (+)
AMCG00014272 tbc1d23 other upstream 6602952 7464503 ~ 7482560 (+)
AMCG00014456 NA other downstream 84070 14189564 ~ 14205014 (+)
AMCG00014461 NA other downstream 196953 14302447 ~ 14356868 (+)
AMCG00014470 NA other downstream 1116420 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 1570137 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 2023985 16129479 ~ 16139032 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06037407_06054548 TPP2 coding CI01000299 null 6036217 ~ 6054548 (-)