AMCG00014451


Basic Information

Item Value
gene id AMCG00014451
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14005191 ~ 14041867 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014451
ATGCTCAAAGTGGTCACTCATTCACATTCTGTTTTGGACTCTACAGGTGAAGCCAAAAACCTACCTCCATACTCTGGTCCCACTAGGATGAGGGACTCCTACTGTACTGTCAACCTGGACCAAGAGGAGGTGTTCAGGACCAAAATCATAGAGAAGTCACTATGCCCATTCTTTGGAGAAGACTTTTACTGTGAAATCCCCCGGAGTTTCCGCCACCTGTCCTTTTACATCTTCGACAGGGATGTCTTTTTTCGAAGGGAGACCATCATTGGGAAGGTGGCCGTGATGAAGGAAGACCTGCAGAAATACCATGGCCGGGACACCTGGTTTCAGCTCCAGCACGTTGATGCAGACTCAGAAGTCCAGGGAAAAGTACACATGGAGATGCGTCTGAGTGAAGTCATTACAGACAGCGGTGCCTTATGCCACAAGCTAGGAATACGAGTTATAGAGTGCCAAGGCTTGCCTATAGTGAATGGACAGTGTGACCCATATGCCACAGTGTCCTTATTAGGACCATCAAGGTCTGAGGCCAAGAAGAccaaagtgaaaagaaaaaccaaCAACCCCCAGTTTGATGAAGTGTTCTTTTTTGAGGTGACAAGACCTCTGAGCTACACAAGAAGATCACACTTCGATGTAGAAGAAGAAGATTTGGACAAGATGGCCATTAGGATTGATCTGTGGAATGCCAGCAACTTGAAATTTGGAGATGAATTCTTGGGGGAAATAAGAGTCTCCCTGAAGGTGCTAGGACAATGTGGCCTCCATGATGCATGGTACTTTCTGCAGCCCAGAGACAATGGCAGTAAGTCTGTGAAGCCGGATGAGCTGGGCTCCCTGAGACTGAACATCGTTTACACCGAGGACCACGTCTTCCCATCAGAGTACTACAGTCCACTGAGAGATCTGTTGCTGAATTCTGCAGACGTTGAGCCGGTGTCGGCATCTACTGCCCATGTACTGGGGGAGGTGTGCCGGGAGAAACAGGAGGCTGCCATTCCTCTGGTCAGGCTCTTCCTGCACTACGGGAAAATCatctgtgaaGAGCACAAGCCCTGCGAGATTGACCCTGTGAAGCTGAAGGAATCGGAGAACCTGGAGACCAACAGGGAGAATCTGAGGCATTACGTGGACCAGATCTTCACTGTAATCACCAAGTCCGGTGTCAGCTGCCCCACGGTCATGTGCGACATCTTCTTCGCACTGCGAGAGTCTGCCGCCAAGCGCTTTCAAGGTGCTGCCTCTTGGGACAAGTTGGCATTCCTCCCAGATGTGAATCACCAGCCAGGCGACCCACAAACATCCCGCACCCTGACACTCATCTCTAAGACCATCCAGACTCTCGGGAGCTTGGCCAAATCCAAATCTGCGAGTTTCAAAGAATCGTACATGGCTGCCTTCTATGACTACTTCAATGACCAGAAATATGCTGATGCTGTAAAAAATTTTCTGGACTTAATTTCTTCTTCTGGGAGGTGGGACCAGAAAAGCATAGAGACCCCCATCATGCTAAAAGAAGGattCATGATTAAAAGAGCCCAAGGAAGGAAACGGTTTGGCATGAAGAATTTCAAGAAGAGGTGGTTTCGCCTCACAAACCACGAGTTTACCTACCATAAAAATAAAGGAGACCACCCGCTGTGCAGCATCCCCATTGAGAACATCCTAGCTGTGGAGCGGCTTGAAGAGGAGtccttcaaaatgaaaaatATGTTCCAGGTAATTCAGCCTGAAAGGGCCTTGTACATTCAGGCCAATAACTGTGTTGAAGCCCGGGACTGGATCGACATCCTCACCAAGGTCAGCCAGTGCAACAACAAGCGGCTGGCCACGTACCACCCCTCGGCGTACCTCAACGGACACTGGCTGTGCTGCAAGGTCTCCGCCGACAACGCGCCTGGATGCACGCCCTGCACTGGaggGCTGCCAGCAAACATTCAGCTAGACGTGGAcggggacagagagacagagagaatcTATTCTCTCTTCAGCACTTACATGAACAAACTGGAGAAAATGCAAGAGGCGTGTGGCAGCAAGTCTGTGTACGATGGGCCTGAGCAGGAAGAGTACTCCAGTTTTGTCATCGATGACCCCCAGGAGACGTACAAGACACTAAAACTCATCACCTCGGCCGTGCACAGGCTGGAGCAGGAGCATGCCCAGTACAAGAGGGACAAGTTCAAAAAGACCAAGTATGGAAGCCAgGAGCATCCAATAGGAGACAAGAGTTTCCAGTGTTACATCAGGCAACAGTCAGAGTGCTCGACTTATTCCATCTGAGTGAGGGAGACGCCGGACACATTGATGTGGACAACATCAATGGCCTCTACCTGGAAAAGGGAATCTATGTAGCATAATGtacagctctttaaaaaaaaaaaaagtgtcaagCTAACTCAGTTTTTGTAAGACATactaaactattttttttttcacaaactgTTCTGTTAGTAGCTATGCACTTTAATCATCTGAGCTTCACGGATGATATAACTCTGCCGTTtggcaatttttttattattttattatttttatcaggaTCAGTTTGTGGATCAGTTAAATGATCGTTAAAACTGCTCTTTTTAATTAAGGATTTGTAATgttaatatttccattttatttcaacttgtAGGGACCAAAACCTAGTTTGGCAAAACAAATTGTATCGTACCCTATACTATCCTATTACACACAAATctgcagtttgtattttttaaggccctaaccatttgtttttaactattgtgattttaattccTCTGGAATTCAAATCTGAATCCTTCCATTCTTTTTCTGAAACCATTCTAATGTGAAACAGTTGTTTTGGAAATATTAGTGGTATACAAATGGTACAGATAGTATACAGTagattactgtatattttaagtcCGCATTAGGAGACatgtacagtgctgtgtgtattAATACTAGTGTGATACAGATGACTTAAATGTGCCCAGATCAGTCAATGCATAGCAGCCAATAAGTGTTCATGCTATAAACTCTCCTCAGCCAGTGAATTCTGGGTAAAACAGTAACCATCGTCATAAGATTTATACTTATCAGATAGCCACAAGATGATAAACACTCCTATTACCTGAGGTTATCCCCTGTGTTATGCATATGTCTGCCTGGAAATTACAGACGAAGAAATCTGAAATGGAAGTATTTCTGCTCAGTCTGCAAAAAATCCTAAGCAATGTCTTGTTTTGAACAAGTAAAGATACTTCAGCTACAGGTTTCCCACACAGTAcgtctattttgtatttgtttatgcatCAAATCTCtacttaaaatatgtaaaaacaacattCCACAATGTCATGAAGTATTTTCAGACCTGtggttcatgtttttttgtgtgatgtCAGATCAGTGTTACAGTATTGTTGCATGTTAGAATAGGGTGAGCCGTaatgctgctgtattttgtttggttttgtttgtttgtttttgcattttccttgaAAGCGCCTGGACACGTATTGAAGGAGCAATGTCCCTGTatcacacacagtacagtactcGGTCTCTTTAAAGCAATATACTGTAAAGATGTTGAGCAGGACTCTGTCACGAACAGAAGCGGGTGACTCGAGCAAGTTTCTGGTTAGTGATGGGAAATTGAAAGTGCATTTTCAGGACCTGTTTTCCTTTTGAGGATTGTTAAAGAAGCCATGTGGTGTTTTACTGCAATAGTCTTTTGTTTGACTCAACCTTTCTAATcagtctttttatatataacaacagCCTCTTGCCCTGCTTATAGGAAGTAATAATTCTCCCTTTTTGAATTGATGTCAGAATTGATTTAAAGGCAAACTGGTAATTGCTTTGAgagcaaatgtttaatttacatttttataaaccaCAATCTATAAGGGTACAAATCAGAGGTTTTGTTGGGGTGCCATTTCCCTGCATTAACAAGATTCAAATCGTGTTAGTCATTTGTTTCAAAACTGTTGAATGTGGCTTTATAAGAATTTCcccaaaaggaaaacaactcCAATAGGGAtcatgttgtattttatatgaaaaaaaaggtattaaaaaaatgcttgtgtttttgtaaagataaacaaagattgtgaaaaaatgttgttttatgtaCAATGTTAAATGAAGGCAATTATATTAACGG

Function

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0002574 thrombocyte differentiation biological_process
GO:0043363 nucleate erythrocyte differentiation biological_process
GO:0051056 regulation of small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG:

id description
K12380 RASA3; Ras GTPase-activating protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014451 True 4150 mRNA 0.43 22 14005191 14041867

Neighbor

gene id symbol gene type direction distance location
AMCG00014452 NA coding downstream 2457 13965617 ~ 14002734 (-)
AMCG00014450 NA coding downstream 75768 13923599 ~ 13929423 (-)
AMCG00014433 dcnl2,dcun1d2,dcun1d2a,LOC105908025,LOC108426072 coding downstream 123068 13866643 ~ 13882123 (-)
AMCG00014431 adprhl1 coding downstream 140341 13853162 ~ 13864850 (-)
AMCG00014435 NA coding downstream 158706 13828455 ~ 13846485 (-)
AMCG00014455 NA coding upstream 65428 14107295 ~ 14108479 (-)
AMCG00014453 LOC104958986 coding upstream 77979 14119846 ~ 14137980 (-)
AMCG00014448 NA coding upstream 102296 14144163 ~ 14147502 (-)
AMCG00014449 NA coding upstream 125579 14167446 ~ 14178388 (-)
AMCG00014454 NA coding upstream 141579 14183446 ~ 14185778 (-)
G70169 NA non-coding downstream 83861 13919521 ~ 13921330 (-)
G70094 NA non-coding downstream 232919 13770177 ~ 13772272 (-)
G70091 NA non-coding downstream 243771 13759226 ~ 13761420 (-)
G70063 NA non-coding downstream 308220 13694757 ~ 13696971 (-)
G70034 NA non-coding downstream 381810 13623115 ~ 13623381 (-)
G70238 NA non-coding upstream 57497 14099364 ~ 14102156 (-)
G70315 NA non-coding upstream 1003985 15045852 ~ 15059774 (-)
G70346 NA non-coding upstream 1196936 15238803 ~ 15242333 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding upstream 1332371 15374238 ~ 15376774 (-)
G70407 NA non-coding upstream 1341766 15383633 ~ 15386700 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 871440 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 2337654 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 2868105 11125029 ~ 11137086 (-)
G69537 NA other downstream 3207044 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 3943961 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 2680206 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 3405001 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 3547400 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 3948784 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 5159936 19201803 ~ 19203567 (-)

Expression


Co-expression Network