AMCG00014461


Basic Information

Item Value
gene id AMCG00014461
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14302447 ~ 14356868 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014461
ATTGTGATACAGTCTCCATTCCCCTACAATTCCACCCTAAAATGCCAGGCAGGTATCTCTGTCAGGTTGTTATCCGTTCTCCACGAGATGTCCGTGTGCATCTTGTTGAATGTGTGGTACATGGGGAGGACACAGATGGAGACCTGGAGTTTGTAGCTCCTGCCCACCAGTCTGTCACTCAGGATATTCCACTGAGCAACGAGACCGCCCAGGATTGGAAACTTCGAGGTATTGTTGAAGGACAGGGGTTTCATGGCCCTGCAGTGCTTTATGTGAGAGCTGGGGAGAGAGTTGGATACCCCTTGATGTTTAGACCTATCTCAGAATGTGTTACCATGgGCAAACTTACTCTGCGGAATGAAACAGATGGCACCGAGCACATGTTTGGGCTCAGAGGGGTTGGACGTAGGCCGCTGGCAGTGGACCATGTCATAATAGACTGTCAAGTGAGACAAATCATGCAGAAGGTCCTAATGGTCCCCAATTACACACAGACCAGGTTAATGTGCAAGgtCGTCTCAGACCTGTCAATCGTCAGTGGACCTCCTGTACTGGACATTAAACCAGGACACACTGCTCCCTACACCATCAATATATCTCCATGGAAACGAGGGACCCATACAGCTGCTGCAGGGGAGAACTCCAAGCCCTACGAAGTGTGGTTCTCATTGGAGGTGGTCTGCAGTCCTACTCAGCCTGTGCGAGTGATGACTGTTCAGTGTGCCGTCCAGCTCCTTGTGGCGCCACACTCTTCAACCAGAGTCCTTGTCCAGTTCCGCCCCTCGGCTCTGGGGAAGGCCAACCACACAACCTGCATCACTTTTAAGTGCccacagCTAAATGAGTGGAAGTTCTACCTGTCTGGAGCAGGACTGTTCCCCGAGCCAATGGCACCGCTGAGTATGAGCACGCGTGTTGGCACCCATTCTTCAGTCATCGTGCCCTTCAGGAATCCGACTGATGACAGTGTGCTGGTGGATGTGCTCTTAACA
>TU87778
ATGGACTCGAGAGTTTATCCCCTTAGATAACCCCACAGATGAAACGCTGGAATTGGAAACTGTCAACCATAATCCAAGAAATTTCTATGTAGAGGTAGATCCTAAGAGACCTCTCCTTGTGGCGCCACACTCTTCAACCAGAGTCCTTGTCCAGTTCCGCCCCTCGGCTCTGGGGAAGGCCAACCACACAACCTGCATCACTTTTAAGTGCccacagCTAAATGAGTGGAAGTTCTACCTGTCTGGAGCAGGACTGTTCCCCGAGCCAATGGCACCGCTGAGTATGAGCACGCGTGTTGGCACCCATTCTTCAGTCATCGTGCCCTTCAGGAATCCGACTGATGACAGTGTGCTGGTGGATGTGCTCTTAACAGATCAGGAACAGACCATATGCCAGTTGAGCCATTTTGTGCCAAGACATCCCAGTGTCACTGAAGAGTCGGCCTTCCGGTTCAcactcaaacaaacacaagGTATCTTGTTGACCCCCAATGCAAAGTTGGACATTCCTCTGATGTTTACACCAGATTCCATGAAGTTATATAAGGCTTGGGTGGTAGTTTTCATGGTAAAGCGTGATGGTGGAAGCTGGAATGTTGACTTGGAAGATCACATTGCTACTGATCTAAGAAGTGTCTGTGCAGTTGCTGAAGACGGAAGTATTCAGAGAATTCACTGGGTGTATCCCATTCATGGCATTCCAGAGGCTGTCCCCTCAAAGACAACACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014461 True 992 mRNA 0.52 7 14302447 14342021
TU87778 False 731 TUCP 0.48 6 14336858 14356868

Neighbor

gene id symbol gene type direction distance location
AMCG00014460 NA coding upstream 60952 14238011 ~ 14241495 (+)
AMCG00014458 NA coding upstream 67035 14223516 ~ 14235412 (+)
AMCG00014447 NA coding upstream 139125 14162125 ~ 14163322 (+)
AMCG00014446 NA coding upstream 141605 14160636 ~ 14160842 (+)
AMCG00014445 cpox,LOC107717573,LOC107585846,LOC107657924,LOC107550392 coding upstream 144721 14151299 ~ 14157726 (+)
AMCG00014459 NA coding downstream 14277 14371145 ~ 14380019 (+)
AMCG00014457 tmem47 coding downstream 95658 14452526 ~ 14462108 (+)
AMCG00014462 dmd,LOC106574978 coding downstream 327865 14684733 ~ 14692283 (+)
AMCG00014465 NA coding downstream 363026 14719894 ~ 14750619 (+)
AMCG00014463 NA coding downstream 410619 14767487 ~ 14811135 (+)
G70221 NA non-coding upstream 131435 14167446 ~ 14171012 (+)
G70054 NA non-coding upstream 605576 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 922043 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 967262 13334214 ~ 13335185 (+)
G69833 NA non-coding upstream 1320013 12980259 ~ 12982434 (+)
G70271 NA non-coding downstream 109836 14466704 ~ 14467744 (+)
G70286 NA non-coding downstream 822977 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 993774 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 1093910 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 1143690 15500558 ~ 15500832 (+)
AMCG00014456 NA other upstream 97433 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 613259 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 1050715 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 4150534 10147979 ~ 10151913 (+)
G69406 tgfbrap1,LOC102780916 other upstream 4293799 10003058 ~ 10008648 (+)
AMCG00014470 NA other downstream 865046 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 1318763 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 1772611 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 2108753 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 3007930 17364798 ~ 17487050 (+)

Expression


Co-expression Network