AMCG00014463


Basic Information

Item Value
gene id AMCG00014463
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14767487 ~ 14811135 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014463
TTGGAGAGCCTCCCCCCTACTCGCTACAAGGAGACGGTCACCTCTCTTCTCCTGTGGATCCAGCAGGCCGAGAACAGGCTGGCCATTCCTCAGGCCACGGTCACTGAATACCCAGTCATGGAACAGAGGCTCAAGGAGAGCAAAGCTTTACAGGTGTCCCTGCAAGAGCAACAAAGTGGTCTGAACTACCTGACCTCGACTATGGAGGAGGTCTGCCGCAAAGCCCCGGTGGAGATCAGTCAGAAGTACCGGCTGGAGATCGAGGCCATACTGTTGCGCTGGAAGAAACTCTCTGCTCACCTGGGAGAGCAGGCGCAGAAACTGGAGGAGTTCATGACCAAACTGCAGCAGTTCCAAAAGTGGATGGCAGAAGTGGATGTCTTTCTGAACGAAGAGTGGCCGGCACTGGGTGACTCTGAAGCTCTGGAGAAACAGCTGGAGCAATGCACTGCCTTGGTGAACGACATCCACACCATCCAGCCCAGTCTGAATGGTATAAACGATGTGGGCCAGGCGCTGAAGGAAGAAGCGGAGCCGGCCTTCGCCAGCaaattgcaaaaagaaatgACTGACCTGAATGGGCAGTGGGACAACGTCTGTAAACAGGCGTATGCAAAGAAATCGGCCTTGAAGGGAGGTCTGGACAAGACGGTGAGCCTCCGTAAGGACCTCTCCGAGATGCAGGAGTGGATTACACAGGCGGAGGAAGACTTCCTAGAGAGGGACTTTGAGTACAAAACCCCAGAGGAGCTGAAGAGAGCAGTGGAAGAGCTGAAGAGGGCCAAAGAGGAGGTCCAGCAGAAGGAGGTGAAAGTGAAGCTTCTCACCGACTCGGTGAATGGTTTCATTGCCAAAGCACCACCAGCAGCCCATGAGGCCTTAAAAACCGAGCTAGAGGTCTTGACAACAAACTACCAGAGACTCTGCAGCAGACTGAAtgggaaatgcaaaacattggagGAGGTGTGGGCCTGTTGGTGCGAGCTGCTGTCTTATCTGGAGGCAGAGAACAAGTGGCTGGACGAGCTGGAGCTCAAGCTGAGGGCCACGGAAAACATCCAGGGCGGTGCGGAGGAGATCTCCGAGGCGCTGGACtcCCTGGAGATCAGCCTTCGTCACCCAGAAGACAACCGTAACCAGATCCGCGAGCTGGCCCAAACGCTGACAGACGGTGGGGTGCTGGATGAGTTAATTAACGAGAAGCTGGAGACGTTCAACACCCGTtgggaggagctgctgcagcaggctGTAAGGAGGCAGCAGACCCTCGAGCAGAGTATCCAGTCTGCCCAGGAAACTGACAAAGCTCTACGTTTGATTCAGGAATCTCTAACAACCATAGACCGCCACCTTTCTGCCTATATAGGTGACCACATCGATGCAGGCCAAATACCACAAGAAGCACAGAAAATCCAGTCTGATTTGAGCAGCCATGAAATCAGCCTTGATGagatgaggaagaggagcacGGGGAGGGATTCTGCGGAGCGTATCCTGTCTCAGATTGAAGTGACCCAGAAGAAATTGCAAGAGGTCTTGACAAAGTTCCGGTTGTTTCAGAAGCCAGCAAATTTCGATCAGAGGTTTTTGGAGTGTAAGATGATTCTGGATGACGTGAAGTCGCAGTTGCCAGTGTTGAAAATGAGAAGTGTGGAGCAGGATGTTGTGCAGTCACAGTTGGATCAGTGTATGAAATTTTACAAGAGCCTGAGTGAGGTTAAGTCGGAGGTGGAGACGGTGATTAAGACCGGGCGACAGATCGTTCAGAGACAGCAGACGGAGAACCCCAAGGAGCTGGACGAGAGACTCACGGCCCTCAAACTGCAGTACAACGAGCTGGGCGCCCAGGTGACAGAAGGAAAGCAGGAGCTGGAAAAGAGCTTGAAGTTGTCCAGGAAGCTGAGGAAAGAAGTCAATGCCCTCACAGAGTGGCTGGCAGCAACAGATGCAGAGTTGACCCGCAGATCGGCCGTGGAGGGCATGCCCACTAACCTGGATGCCGAGGTCGCCTGGGGGAAGGCCATTCAGTTGGAGACAGAGAAGCACCTTCAGCAGCTGAAGAATGTCTCAGACCTGGCGGAGGCTCTGAAGGCCGTGCTTCGGGGGAAGGAGAACCTGGTGGACGACAAAGTCAGCCTCCTCAACTGCAACTGGATTGCCGTGACCTCCAGGGCTGAGGAATGGCTCAACCTGCTGCTTGACTACCAGAAGCAAATGGAGATGTTCGACCAGAACATTGCCCAGATCACAGCCTGGATGTACCGTGCGGAGATTCTCCTGGACGAGTCTGAAAAACAGGAGTCCCGGGAGGAAGTGATCAAGGGTCTGAAGGATGAGCTGAGTGATATCCGACTGAAGGTAGATGCAGTGCAAGGACAGGCCGAAGACCTCATTAAAAACCGTGGAGATCACTGCCGAGTGGTGGTCGAGCCCAAGCTGTCAGAGCTGAATCAACGCTTTGAGGCCATCTCTCGCAAGATAAAGATCGGCAAGGCCTCCGTCTCTCCTCACGAAGTCCAGCACTATCACATGGAGGCTCAAAAATGGCTAGAGTGCCTGGAGGCCGAGCTCCAACAGGGCGACAATCTGAAGGAAGAAGATTTCCAGAAAGACATGGGAGATGGTGAAGAAGGCGCTGTGAAGGAGCTGTTGGAGAAAGGAGAGAACCTGCAAAAGCGAGTCCCAGAAGAAAGGAAACGAGAGGAGATCCGAATTAAACAAAACCTCTTACAAACCAAATACACCACTGTCAAGGATCTCAGGTTACTGAGGAAGAAGAAGGCCCTGGCAGTTTCTCCCCAGTGGTATCAATTTAAGAGGCAGTCAGACGACCTTTTGCAGTGGCTGGATGACATTGAGAAGCGAGTAGCTAACCTGCCCGACCCCAGAGATGACCAAAGGATTAAGGAGATTGATGCAGAGCTGGAGCAGAAGAGAGAAGACCTGAATGCTGTGAATAGACAGGCTCAAAGCTTGTCAAAGGATGGGGCTGCAAAGGCCGTGGAGCCCAGCCTGATCCAGCTCAACAAACGCTGGCAAGAAATAGAGAGCAAATTTGCTCAGTTCCGAAGACTGAACTTAACACAAATTGAAGAGCACAGCACCCTGCTGGAAGGTCACCAGTCTTCTTTTTCAGAAGAGACGGGGAAGCAAAGA

Function

GO:

id name namespace
GO:0001917 photoreceptor inner segment cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014463 True 3156 mRNA 0.53 21 14767487 14811135

Neighbor

gene id symbol gene type direction distance location
AMCG00014465 NA coding upstream 16868 14719894 ~ 14750619 (+)
AMCG00014462 dmd,LOC106574978 coding upstream 75204 14684733 ~ 14692283 (+)
AMCG00014457 tmem47 coding upstream 305379 14452526 ~ 14462108 (+)
AMCG00014459 NA coding upstream 387468 14371145 ~ 14380019 (+)
AMCG00014460 NA coding upstream 525992 14238011 ~ 14241495 (+)
AMCG00014466 NA coding downstream 12657 14823792 ~ 14828121 (+)
AMCG00014467 NA coding downstream 109278 14920413 ~ 14989067 (+)
AMCG00014464 NA coding downstream 211864 15022999 ~ 15043455 (+)
AMCG00014469 dmd,LOC106574979,LOC107692624,LOC107665951 coding downstream 278560 15089695 ~ 15137536 (+)
AMCG00014468 NA coding downstream 353077 15164212 ~ 15179155 (+)
G70271 NA non-coding upstream 299743 14466704 ~ 14467744 (+)
G70221 NA non-coding upstream 596475 14167446 ~ 14171012 (+)
G70054 NA non-coding upstream 1070616 13694815 ~ 13696871 (+)
G69961 NA non-coding upstream 1387083 13352333 ~ 13380404 (+)
G69959 NA non-coding upstream 1432302 13334214 ~ 13335185 (+)
G70286 NA non-coding downstream 368710 15179845 ~ 15180820 (+)
G70378 itm2b,LOC108430053 non-coding downstream 539507 15350642 ~ 15430852 (+)
G70409 NA non-coding downstream 639643 15450778 ~ 15451268 (+)
G70413 NA non-coding downstream 689423 15500558 ~ 15500832 (+)
G70415 NA non-coding downstream 694679 15505814 ~ 15506048 (+)
AMCG00014461 NA other upstream 410619 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 562473 14189564 ~ 14205014 (+)
AMCG00014423 pou2f1b,LOC107748141 other upstream 1078299 13655238 ~ 13689188 (+)
AMCG00014407 LOC107725344 other upstream 1515755 13246309 ~ 13251732 (+)
AMCG00014345 NA other upstream 4615574 10147979 ~ 10151913 (+)
AMCG00014470 NA other downstream 410779 15221914 ~ 15242333 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other downstream 864496 15675631 ~ 15685899 (+)
AMCG00014508 NA other downstream 1318344 16129479 ~ 16139032 (+)
AMCG00014525 NA other downstream 1654486 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 2553663 17364798 ~ 17487050 (+)

Expression


Co-expression Network