Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014466 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 14823792 ~ 14828121 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:0098797 | plasma membrane protein complex | cellular_component |
| id | description |
|---|---|
| ko04020 | Calcium signaling pathway |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014466 | True | 207 | mRNA | 0.54 | 3 | 14823792 | 14828121 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014463 | NA | coding | upstream | 12657 | 14767487 ~ 14811135 (+) |
| AMCG00014465 | NA | coding | upstream | 73173 | 14719894 ~ 14750619 (+) |
| AMCG00014462 | dmd,LOC106574978 | coding | upstream | 131509 | 14684733 ~ 14692283 (+) |
| AMCG00014457 | tmem47 | coding | upstream | 361684 | 14452526 ~ 14462108 (+) |
| AMCG00014459 | NA | coding | upstream | 443773 | 14371145 ~ 14380019 (+) |
| AMCG00014467 | NA | coding | downstream | 92292 | 14920413 ~ 14989067 (+) |
| AMCG00014464 | NA | coding | downstream | 194878 | 15022999 ~ 15043455 (+) |
| AMCG00014469 | dmd,LOC106574979,LOC107692624,LOC107665951 | coding | downstream | 261574 | 15089695 ~ 15137536 (+) |
| AMCG00014468 | NA | coding | downstream | 336091 | 15164212 ~ 15179155 (+) |
| AMCG00014471 | NA | coding | downstream | 419650 | 15247771 ~ 15253971 (+) |
| G70271 | NA | non-coding | upstream | 356048 | 14466704 ~ 14467744 (+) |
| G70221 | NA | non-coding | upstream | 652780 | 14167446 ~ 14171012 (+) |
| G70054 | NA | non-coding | upstream | 1126921 | 13694815 ~ 13696871 (+) |
| G69961 | NA | non-coding | upstream | 1443388 | 13352333 ~ 13380404 (+) |
| G69959 | NA | non-coding | upstream | 1488607 | 13334214 ~ 13335185 (+) |
| G70286 | NA | non-coding | downstream | 351724 | 15179845 ~ 15180820 (+) |
| G70378 | itm2b,LOC108430053 | non-coding | downstream | 522521 | 15350642 ~ 15430852 (+) |
| G70409 | NA | non-coding | downstream | 622657 | 15450778 ~ 15451268 (+) |
| G70413 | NA | non-coding | downstream | 672437 | 15500558 ~ 15500832 (+) |
| G70415 | NA | non-coding | downstream | 677693 | 15505814 ~ 15506048 (+) |
| AMCG00014461 | NA | other | upstream | 466924 | 14302447 ~ 14356868 (+) |
| AMCG00014456 | NA | other | upstream | 618778 | 14189564 ~ 14205014 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | upstream | 1134604 | 13655238 ~ 13689188 (+) |
| AMCG00014407 | LOC107725344 | other | upstream | 1572060 | 13246309 ~ 13251732 (+) |
| AMCG00014345 | NA | other | upstream | 4671879 | 10147979 ~ 10151913 (+) |
| AMCG00014470 | NA | other | downstream | 393793 | 15221914 ~ 15242333 (+) |
| AMCG00014490 | rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 | other | downstream | 847510 | 15675631 ~ 15685899 (+) |
| AMCG00014508 | NA | other | downstream | 1301358 | 16129479 ~ 16139032 (+) |
| AMCG00014525 | NA | other | downstream | 1637500 | 16465621 ~ 16469209 (+) |
| AMCG00014553 | atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 | other | downstream | 2536677 | 17364798 ~ 17487050 (+) |
