AMCG00014484


Basic Information

Item Value
gene id AMCG00014484
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15350804 ~ 15362930 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014484
GAAGTGCGCCCCTGGTGGCGAGTGGAGCACAGCGCCGCTTTAAATACAGCCCGTGTGTGTTGTTGTCTGCGTCACCAGAGCCCGTGGAGAAGCGACCCAGCACGGCCAGGACTCGGGCGTCTGTCGCCGTTTCggttttgtaattaaatttgaGGACTCAACCGAAGACTTTAAGATTATCATTTTCACCATGGTCAAGGTTTCGTTCAGTTCTGCGTTGGGGCAGAAAGACGTGaaaaaagaggaagagaaaagtgAAGCGCTGATCATTCCCGAGGACCCTGAAGATGTGATCCATGTCCGCCAGCAGTCCAAGGCCTGGTGCTGGTGCATGTGCCTGGGGCTGGCTCTCATGTTGGCTGGAGAGGGGCAAGTGTTCATCTGCGGTGTGAAGTACCGTGAGCAGGACTTCATGCTCCGGGAGGCCATCCCCACCCCTTCTGCTCAGCTCCGAGAGATTCAGGAGAGCATCCGAgtcctggaggaggaggaggtggagctCATCAGCGTTCCTGTCCCCGAGTTTGCCGACAGTGACCCCGCGGACATTGTCCATGATTTTCACAGAagGTTGACAGCTTACCTGGATCTCAGCCTGAACAAGTGCTATGTGATTCCTCTCAACACCTCCATTGTCATGCCTCCAAGAGACTTTATGGAGCTGCTGGTAAACATCAAGGCTGGAACTTACCTGCCTCAGTCATATCTGATCCACGAGCAAATGGTCGTTACCGAACGCATTGACAACGTTGACCAGCTGGGCTACTTCATTTTCAGTCTGTGCCGTGGCAAGGACACTTACAAGCTGCAACGTAGAGAATCCATTATTGGTATTCAGAAACGCGAAGCCTTGAACTGCCACAAAATTCGTCACTTTGAGAACAAGTTTGTTGTGGAAACAAATATCTGTGAGCCTTAGAGCTCAGATTCACTGAATTACAGCTTGTTAAAACCACACCTTTTTCACCTTTTTGTGTGCAGTGAGTGATTTTTAATCCCTCTTtcgtttttgtttgtcttttgtcatggttcttttttaatgaactaGTTATGTAAGGGTTGTAATGTAAAGTTTTTTTCATTACTCATCTCATAGCAATATTAGCAGAAAGAATACTTAAATATTTGTCaagtgttttacattattaatcgTCATGGAATTGACATTATTCTACTACAGTGTAAATGAATATCAACCTGTATATCTATTTTtgggatgtttctttttcaggttTAACTGCTAGTTTGGTAAATGTACACCTTTAAATGAAAACcaggtaaattaaaaaatatatatattgaaatgaacCTGTGGCAGAATGCTGTAACATAACAGCTTCAAATCTTATGGACTGGAAAGTATATGAAccttaactgtattttaaaaatacacattaatcaattaaaaaagtgcaattgacaaaataatttgtacCACTGACCTGGCTGTTGAATGGATTgtccaggtttttttttttt

Function

GO: NA

KEGG:

id description
K18264 ITM2B; integral membrane protein 2B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014484 True 1479 mRNA 0.43 6 15350804 15362930

Neighbor

gene id symbol gene type direction distance location
AMCG00014483 NA coding downstream 2331 15336207 ~ 15348473 (-)
AMCG00014477 NA coding downstream 20892 15310175 ~ 15329912 (-)
AMCG00014478 NA coding downstream 46899 15302342 ~ 15303905 (-)
AMCG00014479 NA coding downstream 53471 15292765 ~ 15297333 (-)
AMCG00014473 ints6,LOC106533356,LOC106582497,LOC107723679,LOC107567782,LOC107685346,LOC107725253 coding downstream 81774 15254396 ~ 15269030 (-)
AMCG00014485 nudt15 coding upstream 7250 15370180 ~ 15371125 (-)
AMCG00014492 NA coding upstream 163798 15526728 ~ 15564001 (-)
AMCG00014493 NA coding upstream 228059 15590989 ~ 15595573 (-)
AMCG00014491 NA coding upstream 256232 15619162 ~ 15627108 (-)
AMCG00014499 cnot11,LOC106582250 coding upstream 310096 15673026 ~ 15676127 (-)
G70346 NA non-coding downstream 108471 15238803 ~ 15242333 (-)
G70315 NA non-coding downstream 291030 15045852 ~ 15059774 (-)
G70238 NA non-coding downstream 1248648 14099364 ~ 14102156 (-)
G70169 NA non-coding downstream 1429474 13919521 ~ 13921330 (-)
G70094 NA non-coding downstream 1578532 13770177 ~ 13772272 (-)
G70402 sucla2,LOC107705569,LOC107584790 non-coding upstream 11308 15374238 ~ 15376774 (-)
G70407 NA non-coding upstream 20703 15383633 ~ 15386700 (-)
G70425 NA non-coding upstream 143374 15506304 ~ 15506511 (-)
G70420 NA non-coding upstream 159590 15522520 ~ 15525014 (-)
G70458 NA non-coding upstream 280689 15643619 ~ 15644914 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 2217053 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 3683267 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 4213718 11125029 ~ 11137086 (-)
G69537 NA other downstream 4552657 10796716 ~ 10798147 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 5289574 10058097 ~ 10061230 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 1359143 16722073 ~ 16737877 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 2083938 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 2226337 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 2627721 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 3838873 19201803 ~ 19203567 (-)

Expression


Co-expression Network