AMCG00014514


Basic Information

Item Value
gene id AMCG00014514
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16164845 ~ 16189661 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014514
ATCCCATTCTTCATAAACTGAGGGTGAAAAGCAGGCTTGCTATACCCGGAAGTGCGAGTCAGGCAGGACCGGGATTGGCATTTGCAGTTGTGTTTTCACTCGCCAGACCCCGACCAGCAGCCGCACTTCGAGCTGATCCCCCGGCACAGCTGACGTGGGAAACTACACagACTGTGACTCTGAGAATATCTAGCCGATCCAAAGGACCCTCTGAAAGCCCTGGAACTCGGCTGATAAGTTAATCATGCCGGTGTTTGAGAACTGCCTTGTGGCTCTGGAGGTGAAGGACCTGCCcatcaaagaaaagaacaactTAAAGAAATCGATAACCGCAAATGGAGGGAGCATTACTTATGTCATCAATAAGAAGTGCACCTATGTTGTTGCGAGTAACATGGATACTGTGAGTTCAAATCGCCTGACCAGTATCCGGAAGTTCCAGGTGCCTGTGGTGGGGATGGAGTATGTGTCTCAATGCCTGGAGAAAGGGAGACTTCTCAACACTGGGGATTACCCACCTGCTAAATCACAGAGACACAGCCCGCCTCCAGCCACAACACACTGGGGACATGTGGAGGAACGCTCTGGAGAGAAGCCCAGAGGGCCGCCGGAGACTCCGCAGGAGGTGAAACTGGAGGAAAACGCAAAGGGGGGCAGCTCCCTTGGCCAGTTCAGGATTTACAGAGAGAATGAGGCAGGGTTGCCAGCGTATCCTTCGGATTTCAAGGTGGCCAAATATTTGGTTTTGAAGAAAgctGATGCTGTGGTTGTGGTGGAGCTGCACAGCTGTAAGGGAAACCCATCACTCCCCTTCCGTGTGACTCGACTCTGGAGGAGTCCTGCCGGTCAGGCACCAAAGACCAAAAAAGAAATGATATTCACCTTGACTTCAGAAGACGCCATGATGGCCTACAGACTTGTTTTAAAGGAACTTAAGGACCAAGGCTTCAGTCCAATGAAGGAGCTGCCCTCAGATGTGAAACTCCTCGGGTCAGAGAAACTGGGAGAGCTGCTCCTGGAGCAGAGCCTCAACAGCAGCACCATCTCCAAGGAAGTGGCTGTGTTTGTGGAGCTGCTCTGGACAGAGGCCCTCGGTCGACTTAGTAACCTGCTTCTCAACCCCATTTCCAGTGTCAGTTCTAATGATGTGAGCCGGGCTGAAGGGATCTTGCAGCAGCTCCGGAAGGCTTTGAGCAACGGAGCAAACCAGGGGCAGTTGTTTGCCATCATGGCCGAGTTCTACAGAGTGCTGCCACACAAGAATATGGCAGACACTCTGATCACACCCAAGGTCGTCTCACAAAAAGAGGATCTCTGCCAGCTAATCAGAGACATTATCAATGTGAGCGAGGCCACACTCTGGAGTTCCACGCCCTCCTCTCTTGCTAAATACCGAGCCTTGAGGTGCAGCATTGAGCATGTAGATCCTGGCACTGCTGAGTTCTTCACTGTCAAGGAACTGGTAAAATATTGTTCAGTGGAGATTCACAGAGTGCTGCGTGTGTGCAGAGTTCCCGAGCTCCTGGAATTTAAGAGGGAGCTGGGAAATGTGCGCCCCCTGCTCCATGCCTCCGCACCAAGCAACTTTGTGGGCATCCTGTCCAGggggctgctgctgcccaAAGTGGCTGTTGAGCAGCATGGGGTGAAGAGGACAGATCTTGGAAACCTTGGCAGTGGCATTTACTTCAGTGACTCCATGAGGACCAGTATGTCGTATGCAAAGCCTACTGTCACGGACGGCACTCGTTTGCTGGTGGTGTGTGACGTGGCTCTGGGGGAATGCAGAGACCTCCGCAGCAGAGACCCCAGCTTGGTGTCGGCGCCCACAGGCTGCCATAGTGTGCATGGGGTGCGGCAGACCCCACAATTGTCCTCCGACTTCCAGGATGATGAATATGTGGTGTACAATACTAACCAGactaaaataaagtatgtgGTCCAGTTCTCTGAGGACTATGAGGAAGTGAAGGCGTTTGAACCCACTGTGGACATTTCCACTGAGCTGTCCGAAGCTGTTCTGATAGACGACTCAGTGTCTGAGGCGGAGGCTGACTGCAGTGAGCTGTGCAAGAACCCGCTGGAGGGCATGATGGCAGGACTGCAGGACAGTGCTGGGAAACTCCTCCCTCTGCAAAGAGTTCACGTCAAAGGCAGAGTGATAGACCTCCTGGCAGAGATCATAATTTTTCAGACATACACGAATCACAGTACTGTTCCAATAGAGGCCAAGTACGTTTTCCCTCTGGATGAGTCAGCAGCTGTTTGCGGGTTTGAGGCATTCATTAACGGGAAGCATTTGGTGGGAGagGTGAAAGAGAAAGAGCAAGCCCGGCGAGAGTACAGGCAAGCCATTGAGAAGGGCCATGGAGCATACCTAATGGACCAGGATGCACCTGATGTGTTTACAATTAGTGTTGGAAACCTCCCACCAAACGCCACTGTGTTGATCAAAATCACATATGTGACGGAGCTGAGTGTCAGCGAAGGGGCCATCGTGTTCCGTCTGCCCGGCAGTGTGGCCCCGTGGCAGCAGAGCAGCGCACTGAACGAGAGAACTCAGGACACTGTGAACAAGGTTTGTGTGACTGACATGGAGACAGAGAGGCGTTTTGACCTGGAGATGTCTGTCGAAATGCCTTATGAGATGACACACATTCGCTGCCccacacacaatattaaaatgaagAGAACACAGTGCAAAGCAGTGATCAGCACTGTGAAGGGCGACTCTCTGGGGCCTGATGGCTTTCTTCTGTCTCTCACCTTATCCGAGATGCACCTGCCCAGAATGTGGGTGGAGAAACACCCAGATAAAGACAGTCAGGCGTGCATGCTAGTGTTTTACCCGGCATTTGAGTCCAACACAGACCCGGGTGAGGGGGAGGTTGTCATTCTCTTGGACACCTCCAATTCTATGAGGGGCGAGACCCTTCAGAATGCCCGGAGGATCGCCCTGCTGGCACTGAAGGCCCTCAACTGCAAGGTCAACATCCTCTTCTTTGGCACAGACTTTAAGGAATTGTTCCCCTGCTCAGAATACTCTACGTCTGTCTTTGAAAGTGCCAAGAACTTTATTATGTCTGCACCACCAATGAAGGGCAGCACTGATCTATGGAGGCCTCTGCGCAGTTTAAGCCTCCTAGCTCCATCTAAAGGCACCAGAAATCTCCTCCTGATTTCAGACGGCCATGTCCAGAACGAAGGCCTCACGCTGCGGCTCGCCCAGGAGAATGTTCAGCACACGAGGATCTTCACCTGCGGAGTCGGTTCCACAGCCAATCGACATATGTTAAGATCCCTGGCTCAGTCGGGAGGAGGTGCTTATGAGTTTTTTGACACAAAGATGAAACACACTTGGGAAGAGAAGGTGCAGTCCCAGGTGCGACGGATGGCGTCCCCTGGCTGCAGCGCAGTGTCGGTGAAGTGGCAGCAGTTCCACCcttctgcccccccacccatccAGGCCCCCTCACAGCTGCACTCACTCTTCAATGACTGCCGCCAGCTCGTGTATGGGTTTGTACCTCATTGCACCATGGCCACTCTGTTGGGCAAAGTGAGTGATCAGGAGATAGAAACGATGGTTTCCACCTCAGAGCTCCAGAAGACTAAAGGAACGTTGCTTCACAAGCTCACTGCCAGAGCTGTCATCCGAGATTATGAAGACGGAAGCCTCCACATGGATGAAACGGAGCATGAGgtgAAGAAATCCGAACTGAAGTCCTACATTGTCAGTCTGAGCAAGGAGTTTTCCATTGTGACACAGTACACAAGCTTCGTAGCCATCGAAGAAAGGGACGGTTACTGGGAGTGCACTGCAGAACTCGGGTCAATACTAGACATAGATGTGGATTATTTTGCCAATGTCTTCCTGAAAGAAAAGGGAATCCTCTCTCTAGGAATGAAGGCTCGAGAGACAATCCTGAAACTGATTGCTACCCTGCTGGTTCTCCAGCTTATCCGCTCCAAGGAAGAGGTTGAAGGAGTGCGGCTCAAGACACTCTTTAAGCTGGAGGAGATCCCGCCACAGGAAAAGTCAGAGCGCTGGGATGATGTGAAGATGGCGGTGGAGTGGGTCAAGGCCGCAGACAGACAGTACCCCTGTATCTACAGCCGGCTGGAGTTGGGTTGGGACTGGGAGTCAGTCACGCGCCAGCTGCTGCGCATCGACCCACCACAGGCCCACTCTCTCCTGAGGCCCGCATGTCTACCCTCCCTGAGCCTCAGGAATCCTGTCTTATTACAGTGAAATCTACCCAGCTTGGCAACACAGTGCCAGCTCACATTTGGCATGTGGCAGTGGTGTCAAAACTATCTGTACTGCCCTAAAAGTCAAGTCGTATATATTATATCCATAAATGTTAACATATCatgcttaaaaagaaaaaagcacataGTCTCTGTTGCTTAACATTACTCAAAGATCTCATTACTCATGTTTCATATTCGCCAAGGGAGATTCTCCTCCATGTGTACTGCAGGAGGTAGGTCATGGTCTACAGGTACAAAACCACATTGCACTTTTAAGGTCTTTAGGTCTTTCAAGAGCCTGAACTGTAAGTTAATTACTGTCATGACATTAAATTGAAGATATGTTACAACTGGAAGTGGACAGTGAATATGTCCACTGGTTGGCTTCAGTGTAATCACTGGTCCGAGTGTGAAGCTGGTGATGGGCTCTTGTGATTGACAATGCATGGCATCACctttttattataatcattGAAAAGACCGCTTGAGAACTTTTTGAAAGAATTAACTGCACAATTaatcaaaactaaaatgtttacctctctttttaaatggaaaattaatgGGTTTTGCATTTGACATGATGATTTACCTgctttaatctttttaaaatgtttagctGTGTAGGTGCTATTATAACTTTTTAGACATTTTAGCTGAGCCTATATTGCCTTAAACCATAATGTATTGGCTGTTTTGAATTTCTAAAAGCTTTTTAATAAATCTTGTATGCc

Function

GO: NA

KEGG:

id description
K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014514 True 4988 mRNA 0.50 33 16164845 16189661

Neighbor

gene id symbol gene type direction distance location
AMCG00014507 NA coding upstream 10189 16139473 ~ 16154656 (+)
AMCG00014506 fdx1 coding upstream 128085 16008399 ~ 16036760 (+)
AMCG00014502 NA coding upstream 210144 15947580 ~ 15954701 (+)
AMCG00014504 NA coding upstream 247879 15907581 ~ 15916966 (+)
AMCG00014505 NA coding upstream 261798 15885263 ~ 15903047 (+)
AMCG00014512 mphosph8,LOC106586589 coding downstream 2262 16191923 ~ 16208140 (+)
AMCG00014513 NA coding downstream 68580 16258241 ~ 16278438 (+)
AMCG00014516 ift88 coding downstream 156373 16346034 ~ 16370627 (+)
AMCG00014517 NA coding downstream 182092 16371753 ~ 16373757 (+)
AMCG00014524 sap18,LOC107597378,LOC107668906,LOC107569214 coding downstream 247516 16437177 ~ 16438737 (+)
G70562 NA non-coding upstream 246224 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 435928 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 639830 15522525 ~ 15525015 (+)
G70415 NA non-coding upstream 658797 15505814 ~ 15506048 (+)
G70413 NA non-coding upstream 664013 15500558 ~ 15500832 (+)
G70637 NA non-coding downstream 47449 16237110 ~ 16240338 (+)
G70735 NA non-coding downstream 300750 16490411 ~ 16491118 (+)
G70776 NA non-coding downstream 541217 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 839299 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 942402 17132063 ~ 17173062 (+)
AMCG00014508 NA other upstream 25813 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 478946 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 922512 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 1807977 14302447 ~ 14356868 (+)
AMCG00014456 NA other upstream 1959831 14189564 ~ 14205014 (+)
AMCG00014525 NA other downstream 275960 16465621 ~ 16469209 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 1175137 17364798 ~ 17487050 (+)
G71004 NA other downstream 2082193 18271854 ~ 18274360 (+)
G71525 NA other downstream 6665681 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 10715216 26904877 ~ 26911237 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037068 parp4 coding NC_007120.7 CM002893.2 20483846 ~ 20502622 (+)