AMCG00014537


Basic Information

Item Value
gene id AMCG00014537
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 16692012 ~ 16719737 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014537
CCGCGCGACACGGGATTTCAATCGCTTTGATGTAACAGATACgtgtacaattacaataaacacaactttcaaaatatatgcgTTATCTCAATGATGAACGTAATATAAATACGTTAATATCGGAGGGAAAATGCCTAAAAGAGTGAAAAGTGGCACTTTGTCCGCAGGCGCTGTGACAGGTGGGGGTAAAACCTGGGAACCTGGCCTGGTTGCGGCTCGTTTGGAAGAGGATAATTGGAAGGCAGATGTGTCTTTCATTGTTCCTGGGAGGCTGGAGGATGAGGAGCACATCAAGGCCCTCACTGTGGCTGTGCAACAACCTTTGAGGAAGTTGTTTCATGTGGTCACATGGGAGGACATGTTGCAAAAGGTGACAGAATCTGCAAAATCCATTCTGGATACTGGAGAGGAGTTGCCCATTCACCTCACTGGAAAACTCTTGAAGTTCCTGCTGCTGGTGGACAAACATAATGACCTGCAAAGAAGGACAGCAGAGCAGAAAGCTGCAGAGGACAAAGCTAAGGTCAAGGCAGGAGGGCCTCCCGTGAAGGAGAAAGCTGGAAATAAAACCCCTTCCAAAGGCGACAAAGCTAAAAAAGTCACCGAGCCCCCTCCTCCAATGAAGGAAACTAAGCTCAAACGAAGAGGGGAGGAAGATGAAACCAGCAAATATATCGATGATGAACCGGATGACGGTGTAGATCACTACGTGTTAGTCGTTGGTTTCCACCAGCCTCAACTACTGGCCATCCTGCATGAGCTGGGGATTCACGTCTCGAATAccctgaagaaaaagaaggattTGGAGATGTTCTGGAAATATCTGGAGCCAGTTTTGAACAATGCCAAGTCAGGATCAAAGCTGTATGACGTTGCCAGACTTCATTACATGGTGAAGGAAGCCATCTTACCTCAGGACAAGAGCAACAAAGATGTGACGCTGGAGTTGGGGACCATACTGTTTGAAGATGTTGCATGTCTGATTTATGACTGCCTTGACTGGAGGAGACAACATCTCAACTATCTCAATAATATGAAGCTGATCAATGTCCCAGCTGTGTCTAAAGGAGAAGTTTTCACTGATGAGaTTCAGACTATTGCTTCAATAGCACATACTCCAACCTCGAAAAAGAAGCCATTAACAGAGGATACACAGCAGCCTCTACAAGTATATATCCCAGAACATATCCCAGATGCCCCTGCCCTTACCACTGAAGTGGACATGCGCTATTACAATGTTTTGCTGGGCCTGATTCCTCCAGAGACTGTGTCTGTGCCTTTAATCCTACACTGCATGCTTGAACAGATTGTTGCAACAGAAGAAGATATCCCTCCTTTATCTGAAATAGCTCCACAAACATGTGCTGATGGATTGGACCAAAGTCTTACAGATTACATGGTATCTGCAGTGCTGAGTCTGTCAATCtcagaacaggaaaaaaagGTTCATGAAAGTTTTGATGCAGTGAAAGCTGAAAGGGAAATTCTTCAAAAGATCCCAATATCACAAGTCCTTCATTTCGCACAGCCTCTGCACGAAAACAAGAGGCACATGGCCCGGATTCAGGAGCTAATTCACTTCTGCACAGATGaaaCTCTGAGTTGGTCAGAAGTTGAAAGAGCCTTCAACCAGTTTTTGTTTGAGAGTATGAAGCTGACAGAGGTGGATGATAGAGGATTCCTGACAGAAACTACACTGGAGGAACCAGGGGTCATACCTTGGGACGACCCTGTCCTTTTTGCAAAAGAgctgacaacaaaacaaatgaataaatcaaatgatGTTAAGAAGAGCAGAGCGAGCAGTAGAAACAGCAGCTCAGACCCAGTGCATAGCTCACAGAGAGAGGGACGCAGACGGTATTCTGACTCTAACAGCTCCGtgcACAACAACAACGGAGTCGAACCTTTACTAAGAAAACAgGAATGGGAAGAAATGTGCCAATCCATCAAAATCAATACTGAGGAACTCCAAAAAACTCAACTTCGGTCTATGAGTGACTGGTATTTTGCAGAGCATTatgaacaaaatgtgtttttacagATCCTCCACAATTGTTACCAAACATATCAATGCACCGATATGTACCGTCGCACTCAGGATAACTCCCTTTTCCTGGTGTTTCACAACCCTATGAACAGCCAGCGACAGAGCCAGGAAAAATGGGATATGGCTCTCCATTCCAACGTTGGCTTCAGAAACTACCTGGAGCATGTTTCTGATTCTATTTCGGACTGGGTACGAGATGAAGAGGTGAAATGGCAAGCTTCTCTCCGGGAGAAAGAGGCAGAGAATCTGAAGATGTCACAGTGCTCCTCCTCTGATCCTTCAGAAGGGCCTAGGCCTGTCACCccaaagaagaagaggaaatcTCCTTCCCCGAAAAAAACTGgaaGATCACCCAGCAGATCACCAAGCAAAACTGAAAGTGTTTCTGAACCTCAGTCAGCACGGGACCCATTTGTGCGTGAAGGGTCACTGAAGGCCTGGagggaagagcaggagaaactGAAGGAAGAGGAAGCCGCAAAGaaggcaaagaaagaaaagggggTAAAGAAGAAAGGAGACCGGTCAGTTTCCGCTGACAGCAAAAGAGCCCTGTCTTCTGCCAAGAAATCCCCCCCGGGTAGAATGAAAGAGGAACCCATCACAACCCCTGAACCTCCTGCAGCTAAAGTTCAGATGGCAGCAGCTTCAGTGCCacctgaaaacaaatgcagaTTCACGGGCTACACTATGGGCGATGACCTGATCCAGGTTTCTGGGCAGATTCagtctttctttccctctgaTGGAGGGCAGATCACAGTGCAAAGCACACATTTTGTCCAAgGCTCATCTCTAATTCAAGTGCGAGTGTTGAAAGACAAACATCACTTTTTCGTCCATATCACTGACCCTGTGAAAGAACTGGAGGATGAAGAATATACAGTCAAAAATGAAGTTGTCTGTGGTGAAAAAGAAGaaaTTAGGAAAAAGAGGAAAGGAATTAGCAAATTTGGATCATTTTCTGCTGTATTGGACAATggaatgcatctctctctcagcaACTACGGCCCCTCTGGCAAAGGCAGAGATGAGAAAGACCCCAATTTGGCTTTGGTACTGAACATTCCTCCTGCTTCCACACCTTCTCCTACACCCTCCGCCCCCATTTCTCCCACTACCCCGAGAAAAAAGCCCAAATCCCCCCATGCCAAGTCCCCCCGTTCACCCAAAAGCTCTCGAGCCAGAGTGGCTACTTCATCTCCCCTTGTGGTAGAGGACCCCTCCAAGCAAGAGGACATACAGGTGGACAAGAATGCCCCTTCCACAGCAGCTCATATAGAAGATAGATCTCCAGGTCCCCCTCCCTTCCAGTCTCTGAATGTATCAGCACCCAGTGGACTGGTAGTGAAGTTCCTCAGTGAAAGCTCAGCAGATTTCACAGGAGACTCCTTTCAGGACTCTCACAGGATGCTAGTGAGACAGAGATATCCCGTGACTCACAGCAGCCTCTCAAACGCCAAAAGGAAAGAGCTCTCGCTGGTGGGTGAAGTGTCCAGAGTGATTACCAGCCAAGGAACTGTGATCAAATACATGAGAGATGGATCCAGTGAGGTGCTTTTTGCTGACGGCACTGTTAGCAAACGACTTGATTCACTTGATTCAGGGCCAATCTGTAAGCCCCCGCCTGCTCCTCCTCAAGTTGAACAAGAGGCTCCTGTTAAAAAGGAAGTGATAGAAAAGAAACCTGAAGGGAAAGAACCCACAGAAAAGAAAGGGAAGCTCAATCAGAAGGCAAGTGCGGTTGTAGTCAAGGCAGAGGAGGCTGAGCCCAGTGTCTTGGATCTCAAGGCTGAAGTGGAGTGCATTCCTGAAGCCCAAGTGGGAACCTGGGTCACCACAACACCATCTGGGCTCAGGGTGGcaacaaaaggagaaaaaaaggttGACACTAAACATGCTTTGGTTTACAAAGCCACAGACCCCATCAATGGATCAGTTATGATAACCAGAGAAGATAAAGTACTCACTGTGCTGGAGAAAGATGGCACTGTCATTGTGGACCATGCAGATGGCACCAGAATAACCACCTTGTACCAAGATGTTGAAATCCCTTTTCCTATTACCatcaccaaaaaagaaaaaatcatttGGGTAGAGTGCTTGGGATTCGCCACTATGATAATAAACCAAGAAGACAACACAGTGACTGCTATTTTTGGAGATGGGACTACAGTAACAGCTAGTCCTCAAGGATCATACCAGGTCATTCCATCAAGTGTGGGGTGCCTCCACTTTGACCTGGAGGGCTGTGCAGTGTACAGCTCCACACTGTGCCGTGATGTAACACTGGCCCCTGTCGGTACTAACATAGAACTGCAGCCTGGAAGCTACATTATGCGACACACCTCGGATATTATCTGTGAGGTGATGGACCCAGAGGGAAACCTCTTTCAGGTAACAGTGGATGGAACAACCTCAGCTGTCATCTCCAACACTGAAGACAACACAGAGGAAGAAAAGCAAGGAGACAAGGAGAAAGAGAGTTCAGAACCCAGGCAGTTTCAACACGTGGCTTCTAAAGAAAACTCACCAAGATTAGAAAAGTGCACCATGGGTTCCAGGTATTTCATGGTCCATGCAGATGGTTCTGGTACTGAACTGCTGCACTGCACAGATGTGGAAGCCATCCTGTCAGAGGCCTACTCTGACCCAGCTACAGCAGTGCTCAAGGAACCAATGCCGGAAATCTTAGGCATCCATGGAATTACAATTCTCCGGCCCTGCAAACAGGATGTGTGGTCTCGCTGGCTGAaccagaaagaaagagacaatATAATTCCTCCAAACCTTCAGTCTAGGAGATGGGACACATTTCCTTCAACAGAGAAGAAGGTTCCCGGGCCTCCTTTCGGCAGCACCCTGGGGAAGGGTCTTTACCTGACCGAGCGCCCTGTGTCGGCTCAGCCCATGCCTGTATTAAAGTGTCCTGAGGTGCTGGAGGTTCGCCAGCTAATCCAGTATGCACCCATAAGCAGTGATCTACGGAGGAAGATGCAGATGTCCTTAAAGGAGTACATGGACCACATCCTGACAAAGGAGCACATAGCAGATCAGCTGCTACTGAAGGATCCCAGGACCCAGGAGGAGAGAGTTCACGCTGCAGATTTGCTCAAACTCGTCCTGTCTTTCCCTGAAGATTCAACAGACCctgaggagaagagagagaaacatgTGGATATTGCCTCCTTATATACGCAAGCCATTACTACTCCTCCCAAAACCCCCCCAGAACCTGTGCGATCACAGCGTACAGAGGAGGACATGGAAAGGGACAGACAGGAGAGGCTCGAAGAACAGAGATGCAAAGAGGCTCTGAAGAACCGAACAATACCAGCGTATTTTAACTCTGAATTTGGCAAAGCATTCTTGCTCACCCAAGATCTAGATATGACATTCCTGTCCAGAGAGCTCCCACCATTCCCAAAAAGAGAGACAACACAGCCTGGGAGTAAAATCCATCAAGCTCCCTCAGAACTGACCGGTGGTACAACAAAGAATTCAGGAAATCGGCCTCACGTGTCTTCAGTTCCGCCTCACTCCATCCCTAAAGAGGGAACTGAAAGGCTTTCCCATGCCAGATCAAGACCAAAGGATGTGTATACAGTGAAGAGTGCTGCCCCCCTATCTCACAGTATGCTGCTGGATGTGACTGGGGCTCCTCGTAAGGAGAAGGTCAGAATCCCTTCTGCCATCCTCAGCTGCAAGCCTGGAGGACTTCCTAATCATAAGTTCATTGCAGTGGAGGACCCGGTGAGGAGGAAGGTGAACACTGTGTCGGTGGCTGGCCCTCAAGCTCACGGGGTCCTGCAGTGCGCTCCCCGGGGCTTCGAGCTGTTCCCCGCAGATGTGCAGTTTGGGGTTCTGAGAGAAGGCTACACCTACTCCGTCACTGTGGCGCTGAAGAATGTCGGGATTGACTCGTGCAGATTCAGTGTGATCCAGCCACCACCCTCCACAGGCCTAAGAGTTATATACACCCCTGGACCAGTGGCTGCTGGGATGAAGACAGACCTACTCATAGAGCTGTATGCCATGGCCATTGGGCTGGAGGAGACTGAAGGAGCAGGTCACATTGCCCACCACATTCCCATCCAGACAGAGATGGAGATTCTCTATCTGCCTTTGTTTGAAAGCAGCACAAAAGACTTTCCCCAGGGCAAGACAGGAGCAAGAGTGCGACTCGTCTCAACCACCCCCTCCTCCAGACGAGGAATCATACGGCCTCACAAACTAGATTTAGATCATACCTTTGTGACACAGGCCTCTTGAAGTCCACCCTACACTGCTACAATTCTCCCCCAAAATGACTTTCTTCATCCTGTTTGTGCTAAATGACCCAAAAACATGTTGTGCATTGTTCACGCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014537 True 6421 mRNA 0.48 46 16692012 16719737

Neighbor

gene id symbol gene type direction distance location
AMCG00014535 tbx15,LOC107712261,LOC107724509 coding upstream 80351 16583824 ~ 16611661 (+)
AMCG00014531 wars2,LOC106531917 coding upstream 113855 16557564 ~ 16578157 (+)
AMCG00014523 NA coding upstream 210456 16473794 ~ 16481556 (+)
AMCG00014522 NA coding upstream 241361 16448663 ~ 16450651 (+)
AMCG00014524 sap18,LOC107597378,LOC107668906,LOC107569214 coding upstream 253275 16437177 ~ 16438737 (+)
AMCG00014538 NA coding downstream 2461 16722198 ~ 16731869 (+)
AMCG00014536 gdap2,LOC104943794,LOC104954255 coding downstream 17746 16737483 ~ 16765552 (+)
AMCG00014552 NA coding downstream 609176 17328913 ~ 17332815 (+)
AMCG00014560 NA coding downstream 1059828 17779565 ~ 17780081 (+)
AMCG00014565 NA coding downstream 1229823 17949560 ~ 18029896 (+)
G70735 NA non-coding upstream 200894 16490411 ~ 16491118 (+)
G70637 NA non-coding upstream 451674 16237110 ~ 16240338 (+)
G70562 NA non-coding upstream 773391 15918413 ~ 15918621 (+)
G70496 NA non-coding upstream 963095 15727434 ~ 15728917 (+)
G70418 NA non-coding upstream 1166997 15522525 ~ 15525015 (+)
G70776 NA non-coding downstream 11141 16730878 ~ 16733637 (+)
G70835 NA non-coding downstream 309223 17028960 ~ 17097964 (+)
G70846 NA non-coding downstream 412326 17132063 ~ 17173062 (+)
G70865 NA non-coding downstream 530582 17250319 ~ 17253671 (+)
G70883 NA non-coding downstream 596516 17316253 ~ 17317556 (+)
AMCG00014525 NA other upstream 222803 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 552980 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 1006113 15675631 ~ 15685899 (+)
AMCG00014470 NA other upstream 1449679 15221914 ~ 15242333 (+)
AMCG00014461 NA other upstream 2335144 14302447 ~ 14356868 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other downstream 645061 17364798 ~ 17487050 (+)
G71004 NA other downstream 1552117 18271854 ~ 18274360 (+)
G71525 NA other downstream 6135605 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 10185140 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 11115766 27835503 ~ 27841871 (+)

Expression


Co-expression Network