AMCG00014548 (LOC105904639)


Basic Information

Item Value
gene id AMCG00014548
gene name LOC105904639
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17120204 ~ 17126776 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014548
ATGATGGACtatggagGTACAAGCTCCTCATTAAAGCGGTTAGTGACTGTGCAGAGTGGCCCCCTGTACCGCACTGAAGGCTCCCACATCACCATCTGGTGCAATGTTACCGGCTATAAGGAGGGTGTGGTGCAGGATTTCGAGTGGTCCATGTATCTGCCCTCGACCCCCAATCGGGAGATTCGTATCATCAGCACCATGCAGTCCGACTACGCCTACGCCATGTATGCCCAGCGGGTCAAGAACCAGGAGATCTACATTGAGAGGCTGAGCGGAGACTCTGTGCTGCTGCACATCACCAAGCTGGAGCTGAAGGACTTGGGGCAGTTTGAGTGCTACACCCCCAACACCGATGGCCAGTACCTGGGCGTCTACAGTGCACGGACCAACCTCACGGAAGCACTTGTTCAGGAAGACACCAGATGCCCCGAGCAACTGGCTGGAGGAGCGCCAGACAGAACAAGAGAGAGTGTGATTGTGCTGCTCAGAGCACCGCATCTGACTGCTAAATAG

Function

NR:

description
PREDICTED: immunoglobulin superfamily member 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014548 True 513 mRNA 0.55 3 17120204 17126776

Neighbor

gene id symbol gene type direction distance location
AMCG00014547 NA coding downstream 33418 17065669 ~ 17086786 (-)
AMCG00014546 NA coding downstream 84723 17032530 ~ 17035481 (-)
AMCG00014545 NA coding downstream 117543 16991169 ~ 17002661 (-)
AMCG00014543 NA coding downstream 142425 16976410 ~ 16977779 (-)
AMCG00014542 NA coding downstream 146421 16966792 ~ 16973783 (-)
AMCG00014550 NA coding upstream 44054 17170830 ~ 17241074 (-)
AMCG00014549 NA coding upstream 123514 17250290 ~ 17279447 (-)
AMCG00014551 NA coding upstream 187410 17314186 ~ 17323621 (-)
AMCG00014554 LOC108242195,LOC106919873,LOC106525269,LOC106574724 coding upstream 291681 17418457 ~ 17432186 (-)
AMCG00014556 LOC107569141 coding upstream 358074 17484850 ~ 17500956 (-)
G70731 NA non-coding downstream 650976 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 750740 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 838305 16281685 ~ 16281899 (-)
G70660 NA non-coding downstream 906077 16212544 ~ 16214127 (-)
G70491 pdcl3,LOC106586481,LOC102788355,LOC106582251 non-coding downstream 1416890 15700208 ~ 15703314 (-)
G70876 NA non-coding upstream 157543 17284319 ~ 17284576 (-)
G70898 NA non-coding upstream 222660 17349436 ~ 17350972 (-)
G70954 NA non-coding upstream 877034 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 1202421 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1537488 18664264 ~ 18664631 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 382327 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 3986453 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5452667 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 5983118 11125029 ~ 11137086 (-)
G69537 NA other downstream 6322057 10796716 ~ 10798147 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other upstream 320092 17446868 ~ 17462290 (-)
AMCG00014559 NA other upstream 462491 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 863875 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 2075027 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 2090946 19217722 ~ 19225230 (-)

Expression


Co-expression Network