AMCG00014557


Basic Information

Item Value
gene id AMCG00014557
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17555667 ~ 17566646 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014557
ATGACAGATTTTACAGATGAAGACCTGGACAACTTTCTGCAAAATGAGGTGGACCTCAGACACCGACAGGTTTACAAGACAGTAGAGCAGGTACAACATATAATGAGGAATCTGACCACAGAGGTGAGCAACAAGGATGGAAGATTTCAGTCGATCTCTAACGCCGGTATCCACAGTGATAACTTAAAGGTCCTCACACCTACCCTCTTCTTGATCTCTGTGCCAATCAGGGGTCTGTGTGGGTATAAAGAGCGCAAGGCCAGGCAGTGGCGTTATTACACCCTGAGCGGATCAAAACTGTTGTCCCCAGTGCGGGAACCGGAGAAGCTACACCAATGGCTGGAGCTTGAGAATTTCAGCAACCCATCCCAGGAGTGGCATGATGCTCGAGTGGCCATCGAGGGGGACATTGTGCCAGCCAAGGTGGTGAATGTCTTCAAAGAGCTGCTGGAAGCTGCCATCCAAAGCTGTAACCTCACAGAGGTGGAACTTTTTCCAACTGTGGAGCTCATAAACTGCTGGCCGAAAAAGGCTCGCTGGCCTAGATTCCTCAAACGATGGCCCTCAAAGGAGAAAGCAAGATGCATCAAGtcttttggATTTAATCTGATGGCCTCTTCGAATTACCACTGGCTGCTGTCCTTCTCGAGAGCGGAGCAGGTCTTGATGAGCAGTATTGATGAGGACGGTGGCTGCAGAAGGAAGTGCTATCGGATCATGAGGCAACTGAAAGAGGACATTTGGTGCACTGGAAGTAAACCTGTAATCACTGCCTACCATCTGCAGACCCTGTTATTTTGGTCCTGCGAGAAATATCCTTCCACCAAAGACTGGTGGAACTTTAAACAGAGTTTCCTTCGACTTGTGAAGAAGCTTCATAAATGTGTGAGTCAGAGGTACCTGAGACATTATTTTGTAAGGGGCTACAATCTGCTTAAATACGCCAACACAAACGAGCTGGATATGATGGGCAAAAAGATATTGGATTTCCTTGAGAATCCTGGACTCTACATCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014557 True 1020 mRNA 0.48 6 17555667 17566646

Neighbor

gene id symbol gene type direction distance location
AMCG00014556 LOC107569141 coding downstream 54711 17484850 ~ 17500956 (-)
AMCG00014554 LOC108242195,LOC106919873,LOC106525269,LOC106574724 coding downstream 123481 17418457 ~ 17432186 (-)
AMCG00014551 NA coding downstream 232046 17314186 ~ 17323621 (-)
AMCG00014549 NA coding downstream 276220 17250290 ~ 17279447 (-)
AMCG00014550 NA coding downstream 314593 17170830 ~ 17241074 (-)
AMCG00014558 NA coding upstream 6257 17572903 ~ 17582074 (-)
AMCG00014561 dach1,LOC107668899,LOC108426032 coding upstream 188318 17754964 ~ 17808430 (-)
AMCG00014562 dach1,LOC105030421,LOC106586049 coding upstream 368520 17935166 ~ 17935714 (-)
AMCG00014566 NA coding upstream 463195 18029841 ~ 18037569 (-)
AMCG00014568 LOC104962236,LOC106536821 coding upstream 548365 18115011 ~ 18179286 (-)
G70898 NA non-coding downstream 204695 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 271091 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 1086439 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 1186203 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 1273768 16281685 ~ 16281899 (-)
G70954 NA non-coding upstream 437164 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 762551 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1097618 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 1102155 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 1119852 18686498 ~ 18687346 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 93377 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 817790 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 4421916 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5888130 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 6418581 11125029 ~ 11137086 (-)
AMCG00014559 NA other upstream 22621 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 424005 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 1635157 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 1651076 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 4659278 22225924 ~ 22244915 (-)

Expression


Co-expression Network