AMCG00014558


Basic Information

Item Value
gene id AMCG00014558
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17572903 ~ 17582074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014558
ATGGATGTTGAAGAAGCATTTAAAGTCGTTGGGGAAATGGGTATTTATCAAATGTACCTGTGTTTTCTGCTAGCGTTTCTGTTAATGCTTTATGTTGCCGCAGAAGCTGTCCTTCTTACCCTGGTGGGGTTATCACCTGCGTTTCAGTGGGATCTCCAAGGGCTGTTGGCCAATTCCAGCCTAGCCAATGTATCTTCCATGGAGGAGGGTCAGGTATTGAAACACTGGCTGCATGAGGCAAACCAAAGTGAAATACACAGACATCTGCAGTTCAGTAATCGCTACTCTTCCGTTATCTCTGAGTGGTACTTGGTAGGAGATGCAGAATATGAAGTTTCAATGGCAAACTCCTTATACTTCGGTGGTGTGCTAATAGGGGCTGTCACCTTTGGGCAACTTTCTGACATCtatggaagaaagaaaatctaCCTTATAGGCTTGGCGTTTGACACCGTTTTTGCTGTTGCCACGGCACTTGTGCCTACATATCAACTATTTGCGGTCTCCCGGTTCCTGGTGGGGATCATGAATGGAGGATGTTCAttggttgcttttgttttgctaaatgAATATGTGGGTACATCCTACTGGTCTCTCACAgGAACTCTAGGCAGTTTTTCCTTTGGTGTTGGAATAATTGTCTATGCTGCCATTGGTTATTTTATCCAGTCCTGGAGGTGGCTAGCATTTGTAGCTAATGTGCTAGCAGTGCTagtgttttttctgtcattattcattCCAGAATCTCCACGCTGGCTTTACTCTCGAAGTCGAATCAGTGAAGCTGAAAAGGTCCTCTCCTTGATCAGCAGACGAAACAAAAACTCAAAGTCCTTAATTTCTTTATCAGCCCCACCGATAGCCAAGAACAGGCAGAAAGCCAGTTCCCTGGACCTGTTCCGACACAGAGTCCTCCTCAAGCGTAGCCTGGTCATGATTCTTGTCTACTATGGTCTTACATTGAATGCTGGGAACATGGATGGAAATGTCTATGTCAATTTGGGCCTTTCAGGAGTTGCAGAACTGCCTTCTTCCCCAATTAgtttttacttaattaatcGCAAATGgtGTGGACGAAGGAGGTCCTtatcaggattttttttcttgggaGGGATAGCTTGTGTCGTAATAGCATGTGTGCCAGAAAAACAAGGAACTGGACTGTTTGCAATTGTTAACAAAATGACTCTTTCACTGCTGGGCAAGATGGCTATCAGTGCAGCCTTCAGCATTGTGTACATTTACTCTTCTGAGCTCTACCCAACAGTAGTCAGGAACGCTGGCATGGGAGTGTGCTCCATGGCATCACGGTTAGGAGGCATACTGGCGCCCTTCATCCCGTCTTTGAAATTGATACAGTGGGCCCTGCCTTTTATTGTGTTTGGGACTGCTGGTCTGTCGGCAGGGGTTCTGACACTGTTGCTGCCTGAAACCCTCTTGAAGACCCTGCCAGAGACCCTCTCAGACTTGGAACAAGACTCTCCTGATGTTGGTTACCGAAGACTTGGAGATGAAGATTTGTTACTGGAGCCAATTTGCAGAGATTCGGCAGCCCACAGCGAGTGGcaggaggatgaggatgagtTCCTCAATGCAgctgaacaaacacaaatgatgtGA

Function

GO: NA

KEGG:

id description
K08211 SLC22A15; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014558 True 1620 mRNA 0.46 12 17572903 17582074

Neighbor

gene id symbol gene type direction distance location
AMCG00014557 NA coding downstream 6257 17555667 ~ 17566646 (-)
AMCG00014556 LOC107569141 coding downstream 71947 17484850 ~ 17500956 (-)
AMCG00014554 LOC108242195,LOC106919873,LOC106525269,LOC106574724 coding downstream 140717 17418457 ~ 17432186 (-)
AMCG00014551 NA coding downstream 249282 17314186 ~ 17323621 (-)
AMCG00014549 NA coding downstream 293456 17250290 ~ 17279447 (-)
AMCG00014561 dach1,LOC107668899,LOC108426032 coding upstream 172890 17754964 ~ 17808430 (-)
AMCG00014562 dach1,LOC105030421,LOC106586049 coding upstream 353092 17935166 ~ 17935714 (-)
AMCG00014566 NA coding upstream 447767 18029841 ~ 18037569 (-)
AMCG00014568 LOC104962236,LOC106536821 coding upstream 532937 18115011 ~ 18179286 (-)
AMCG00014571 NA coding upstream 681881 18263955 ~ 18291505 (-)
G70898 NA non-coding downstream 221931 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 288327 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 1103675 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 1203439 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 1291004 16281685 ~ 16281899 (-)
G70954 NA non-coding upstream 421736 18003810 ~ 18004023 (-)
G71016 NA non-coding upstream 747123 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 1082190 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 1086727 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 1104424 18686498 ~ 18687346 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 110613 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 835026 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 4439152 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 5905366 11660011 ~ 11667537 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other downstream 6435817 11125029 ~ 11137086 (-)
AMCG00014559 NA other upstream 7193 17589267 ~ 17621151 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other upstream 408577 17990651 ~ 18022095 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 1619729 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 1635648 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 4643850 22225924 ~ 22244915 (-)

Expression


Co-expression Network