AMCG00014567 (mzt1,si:dkey-15d12.2)


Basic Information

Item Value
gene id AMCG00014567
gene name mzt1,si:dkey-15d12.2
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17990651 ~ 18022095 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014567
CACAACTGGTGAAAAAATTGTAAACATGGCAGGCGCTGCTAATTTGAATGCTGTCCGGGAGACAATGGATGTTCTCCTTGAGATATCCAGGCTTCTGAACACAGGCCTGGACATGGagtctctgtccatctgtgtgcgACTGTGTGAGCAAGGCATCAACCCGGAGGCCCTGTCTTCGGTCATAAAGGAGCTCCGTAAGGCTTCAGATGCGTTTAAAGTTCCTGGGCTCCAGGGGGTGGGCTCCCAGAAGGCCGAG
>TU88673
AAAGGTGAGCCACAACTGGTGAAAAAATTGTAAACATGGCAGGCGCTGCTAATTTGAATGCTGTCCGGGAGACAATGGATGTTCTCCTTGAGATATCCAGGCTTCTGAACACAGGCCTGGACATGGagtctctgtccatctgtgtgcgACTGTGTGAGCAAGGCATCAACCCGGAGGCCCTGTCTTCGGTCATAAAGGAGCTCCGTAAGGCTTCAGATGCGTTTAAAaCATCTGAAAACAGTACAAGCTAAGGAAGACAGTGATGCCCTTATATCAACTGACATCACAGCACAACAGGCTCAAAGTACAAAACTGGAGAACATTTGACTTCATAAAGGATGCTTTGTGCACGTATTGAAAGGTTACAGCTCAGTAGAGAGAGAGTCTACGTTCTTCGTCAAGAGCCTGTGTACTTAATATAATGCCATATAGGCATTTCTATCAAAtggaaagtattttaaaataaatgctagtGTCtgaagtgattaaaaaaaaaaaaaaaaacaatgttcatGAAACTGAATACATTATACATCACCATACAGCTGTTGCAGTGCTAAAAccttaaaaagaacaaatatatattgtgttaatagtgtaataattgtctaatttatttcattaaatactAAATGAGGGGGGAAAATGATTTTTTATTAAGTGTGGAAtgtttataatatgtatatacactcacctaaaggattattaggaacaccatactaatactg

Function

symbol description
mzt1 Predicted to be involved in gamma-tubulin complex localization. Predicted to be located in centrosome and spindle. Predicted to be part of gamma-tubulin large complex. Orthologous to human MZT1 (mitotic spindle organizing protein 1).

NR:

description
PREDICTED: mitotic-spindle organizing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014567 False 256 mRNA 0.53 3 17990651 18022085
TU88673 True 728 lncRNA 0.37 3 18014826 18022095

Neighbor

gene id symbol gene type direction distance location
AMCG00014562 dach1,LOC105030421,LOC106586049 coding downstream 54937 17935166 ~ 17935714 (-)
AMCG00014561 dach1,LOC107668899,LOC108426032 coding downstream 182221 17754964 ~ 17808430 (-)
AMCG00014558 NA coding downstream 408577 17572903 ~ 17582074 (-)
AMCG00014557 NA coding downstream 424005 17555667 ~ 17566646 (-)
AMCG00014556 LOC107569141 coding downstream 489695 17484850 ~ 17500956 (-)
AMCG00014566 NA coding upstream 7746 18029841 ~ 18037569 (-)
AMCG00014568 LOC104962236,LOC106536821 coding upstream 92916 18115011 ~ 18179286 (-)
AMCG00014571 NA coding upstream 241860 18263955 ~ 18291505 (-)
AMCG00014572 LOC107655530,LOC107720111,LOC107668890 coding upstream 294759 18316854 ~ 18317264 (-)
AMCG00014570 NA coding upstream 295990 18318085 ~ 18323699 (-)
G70898 NA non-coding downstream 639679 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 706075 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 1521423 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 1621187 16366124 ~ 16369464 (-)
G70679 NA non-coding downstream 1708752 16281685 ~ 16281899 (-)
G71016 NA non-coding upstream 307102 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 642169 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 646706 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 664403 18686498 ~ 18687346 (-)
G71174 NA non-coding upstream 828629 18850724 ~ 18851111 (-)
AMCG00014559 NA other downstream 369500 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 528361 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1252774 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 4856900 13087608 ~ 13133751 (-)
AMCG00014374 NA other downstream 6323114 11660011 ~ 11667537 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 1179708 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 1195627 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 4203829 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 9263325 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 9313600 27335695 ~ 27369527 (-)

Expression


Co-expression Network