AMCG00014570


Basic Information

Item Value
gene id AMCG00014570
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18318085 ~ 18323699 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014570
CTGAGTTTCATCCAGTACTCTTGACAGCTATGCATATATAATCGTTTGCACAGTTATATTAGCTATCTATTTAATCATTTGTCCTACTAGCTTGTGAGATAAACCTAAATCATTCtacatttttctaattaaaaacatcaacaattcCTGCTCTGATATATGCACTGCTGGAGAGTTCGACTGATGACGTCATTGACCGCTCTTAACCAACCAGCAGAGAGAAGGCACTCTGTACCCGGAAGTGTAGCTGCTGATCGGAGATGTTTGAACTGGGGCAATCTGCTGattttgaCCACACTCTTGAAAGCATTGGAAGGTTACCTTCAGACCTGTTTGCTGAAACATGTCAGCAGGTTCTGATTCACCTTCAAGGCCGGATACCTGCTGTGGATTCAGCTAATATCTGTGATAGACTTCAAAATGCTGGTATCAGATTGGATTTGGCTGCTCTTGAAAAGATCATTCAcatggttttattcattttcagAACTGCAGCAAAAAACAATTTGTCTTCAGAACAGCTAGTCACAGAATTGAGTGAAAGAAGCAGCAAGTGGTCCAAACAATCTCTTCAAGTCATTCACAAGCTCTGGAATGAACAGGGAAAACTGGTCTTAGTGCATCAAGATACAAAAGCCATGATTAATGTTGGAAAGCTGGTAGATTTGCAGTGGAGACTTGGGATGGCTGTGAGCTCAGACACCTGCAGGTCTCTCAACTATCCATATGTGTCCATGACATTAAAAGTAGCTGACTCTGCAGGACAATTATCAATCAAATCTTTTGAAATGACTATCCCACAGTTCCAGAACTTCTTCCGACAGTTTAAGGAAATGGCAGCTGTTTTGGAAACGGTATAATGAGAATGCAATGGGAATTCTAAGCATTCTGTTCAAGTCTGACCCCTCTTGCAATGGTAACAATAATGAGAATGTTTACATGTATCAGTAGTTGCAAGGTCACCTTTGTATAACTATTTTGAACTAACCTTGTGTTTCATTGCTCAGTGGGCATAGCTGGGATATTTAAAGGGGAgaaacaaattatgtattttcatttgtactaaatactaaaatgcatgaaaattgTGTAATTTGATAATGCTATTGATAATGACAATTTTTGTCCGCCTCAGCATTCACGTTTATGACAAGCTTAACGACAGAAAGtgtgtataatacataatatttttgttttcatatgtatGATACTATGTTATGTACATCTCTTTAGTGTTACCCTGAATGTGTCCCCAATGGTActgtgaaaaaacatttaaaactgtaaaaggaTCTCCATTTTCCTGTTTTATACCAATGTCAAACAAGTGTGAATGAATATGCATTCCCCACTATGATATCTCTTGCATACTATTTTAGAATACACTGATGGCCTGTTATCAgtcatctttaaaaacaattcccCCATAAGGATTTATACACCCCCCAAAATACTGGTGCCACTGTTTTCTGGGTATTTAACCCTCATTATACCATGGATTGTCATCTGGATATTGGCTTCATGTTCTGCTTCTTTGGTTTCTGCTCCCAAGTCAGCAGACTCTAGCCCACTTAAATGGTATGGCGAGAACAGAGGCTGTGCCCTGGCGCCTGCATGAATGAAACCGAACGAGGGCTCTGATAGGAGCTGCTGTTCCTATGCCAGTCCCTGTGGGCCGACACCACGTGTTCACAGAGTGGTGCTAGTGGGATTACATTGACTGCATATTTGATCTATTTCTGGGAGATGGCTTGATACTTAAGGCATCCTGTTACAGGCCTCAAGGAACTCCAGGAAACCTCAATCTCAGCTGAGAGTCCTAATACTGTGTAATGTTTCAAAGCCATTAGAATCCACAGGACCAAGAAGTAGATTTCATTATTGTCTGTTATAAATTAGCTTTGTAGAGAAAGAATAGGGCAGTACACGCCGACGGCTAACTTCTGTGTGCTTGTACTGCTCTTGTACTACAGGGCATATGGCAAATAATTGCTATAGCATTGTTTTAAGTAGAGGAGGAAAGCTTCTATTAAGTGCAATAACAGCTGCTAAGATAATGCATGATTTAAATGGGAATTTAATGGTTATTGAAGTGCCTTTTGCTCCTTCCTCTGCTCATTTTGGTCtgatctaaataaataaataaatatctgggCCATCTTTGATGTACTGTAGATATCCAAGAACTTAGCTTAGCATACAGCAGCTAGCTTCTTGCAACTTAACATattctaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgaacaccAGTGCATATTTAGCACCACTGTGAAGG

Function

GO: NA

KEGG:

id description
K22562 COMMD6; COMM domain containing 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014570 True 2297 mRNA 0.39 7 18318085 18323699

Neighbor

gene id symbol gene type direction distance location
AMCG00014572 LOC107655530,LOC107720111,LOC107668890 coding downstream 821 18316854 ~ 18317264 (-)
AMCG00014571 NA coding downstream 26580 18263955 ~ 18291505 (-)
AMCG00014568 LOC104962236,LOC106536821 coding downstream 138799 18115011 ~ 18179286 (-)
AMCG00014566 NA coding downstream 280516 18029841 ~ 18037569 (-)
AMCG00014562 dach1,LOC105030421,LOC106586049 coding downstream 382371 17935166 ~ 17935714 (-)
AMCG00014578 kctd12 coding upstream 143711 18467410 ~ 18468282 (-)
AMCG00014577 zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427 coding upstream 151844 18475543 ~ 18477922 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding upstream 161562 18485261 ~ 18487280 (-)
AMCG00014579 mycbp2 coding upstream 165851 18489550 ~ 18557288 (-)
AMCG00014585 NA coding upstream 316113 18639812 ~ 18644670 (-)
G70954 NA non-coding downstream 314062 18003810 ~ 18004023 (-)
G70898 NA non-coding downstream 967113 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 1033509 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 1848857 16465779 ~ 16469228 (-)
G70689 NA non-coding downstream 1948621 16366124 ~ 16369464 (-)
G71016 NA non-coding upstream 5498 18329197 ~ 18331100 (-)
G71133 NA non-coding upstream 340565 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 345102 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 362799 18686498 ~ 18687346 (-)
G71174 NA non-coding upstream 527025 18850724 ~ 18851111 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 295990 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 696934 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 855795 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1580208 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5184334 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 878104 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 894023 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3902225 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8961721 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 9011996 27335695 ~ 27369527 (-)

Expression


Co-expression Network