AMCG00014581


Basic Information

Item Value
gene id AMCG00014581
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18645860 ~ 18659061 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014581
ATGCCGGCTGTCCCCTTGCCACCCAAAGAGAGTAACCTCTTTAAGAGGATCCTGAAATGTTACGAACAAAAGCAGTACAAAAATGGACTGAAGTTTTGCAAGATGATTCTTGTCAATCCAAAATTTGCTGAGCATGGAGagacTCTGGCAATGAAGGGGCTCACTCTCAATTGCTTAGGAAAGAAAGATGAGGCGTATGAGTTTGTCAGGAGAGGACTACGCTGGCATGTCTATGGACTCCTGCAAAGATCTGACAAGAAGTACGATGAGGCCATTAAGTGCTATCGCAACGCACTCAAGCTGGATAAAGACAACCTGCAGATCCTCAGAGACCTGTCCCTGCTGCAGATACAGATGCGAGACCTGGAAGGGTACAGGGAAACCAGGTACCAGCTGCTGCAGTTAAGACCAACACAGCGGGCTTCGTGGATTGGCTATGCCATCGCTTACCATTTACTTAAGGACTATGACACGGCCTTAAGATTGCTGGAAGAATTCAGAAAAACTCAGCAGGTTCCTCCCAATAAAATTGATTATGAGTACAGTGAGTTGCTACTCTTCCAGAATGACGTCATGAGAGAGGGCAATTTGTTCCAGGAGTCTTTAGAACACATAGAAGCATATGAGAAGCAAATATGCGATCAACTTAAGGTAGAAGAAATAAAAGGTGAAATGCTGTTAAAACTGGGAAGGCTAGAGGAGGCTGCTAGTGTATACCGGGTTCTCATCGATCGTAATGCAGAAAACTGGTCTTACTATGAAGGCCTGGAAAAAGCTCTCCAGCCAAGCACTGTGGAGAAGAGGCTGCAGATTTATGTAGAAGTAGGAAACATAAATCCCAGAGCTGTCTCTCCAAAGAGGCTGCCACTGAACTTTCTTTCAGGACAAAAATTCAGAGAAAAAATTGGCAAATTTTTAAGAGTAAATTTCAGCAAAGGCTGTCCTCCCTTGTTCACAACATTGAAATCATTATACAGCAACCAGGAAAAGGTGGCTGTAATACAAGAACTAGTTACTGGGTATGAATCTTCTCTGAAGACATGTGATTTGTTCAGTCCTAATGaaaGTGGTGAAAAGGAGCCTCCAACAACACTGCTTTGGGTTCGATATTTCCTGGCACAGCATTTTGACAAACTGGGCAAGAGGGCTTTGGCTCTGGAATACATCAATGCTGCAATCGAAAGCACCCCCACTCTTATAGAACTGTTCTATGTAAAGGCAAAAATCTATAAGCATGCAGGCAACCTAAAGGAAGCCGCAAAGTGGATGGATGAAGCGCAGTCCCTTGATACAGCTGACCGTTTCATCAATTCAAAGTGTGCAAAATACATGCTGAGAGCTGGCATGATTAAGGAGGCCGAGGAGATGTGCTCTAAGTTCACCAGGgAAGGCACATCGTCCATGGACAACCTCAATGAAATGCAGTGTATGTGGTTCCAGACAGAATGTGCCACTTCTTACCAGAGTCTTGGAAAATATGGCGATGCTCTGAAGAAATGTCATGAAATAGAACGGCATTTTTTTGAGATCACAGATGACCAGTTTGATTTCCATACCTACTGCATGAGGAAGATGACTCTGCGTGCCTATGTGGACCTGCTCAAACTGGAGGATGTCCTCAGAAGACACTCCTTTTACTTCAAAGCAGCACGGTGTGCCATCGAAATCTACTTGAAGCTCCACGATAATCCTCTAACAAATGAAAGCCAGGAACAGGAAGTCAACTCGGAGAACCTGTCTGCCAAGGAGCTGAAGAAGATGCTGAGCAAGCAGCGGCGAGCACAGAAGAAAGCTaagctggaggaggagaggcGGCATGCAGAGCGAGAGAGGCAGCAGAAGAACCAGAAGAAGAGGAgggatgaggaagaggaggagaccAGTGGCCCAAAAGAGGAACTTGTACCAGAGAAACTTGAACGGATTGAAAACCCATTAGAAGAGGCTGTCAAGTTCCTGACTCCCCTCAAAAACCTTGTGGCAGACTGTATAGATACGCACCTTCTAGCATTTGAAATCTATTTTAGAAAAGGAAAGTTCCTCTTAATGCTCCAGTCCGTTAAACGAGCCCATGCCATTGATGCTGACAACCCATGGCTGCATGAATGTTTGATTAGATTCTCTAAAGCTGtaTCAGATCATAGTAACCTTcatgaaaccattaacaaaGTCTTGACTCAAGAGATGAAGAAAATCTTTGCTAAGAAGAATTATGAGAGCTTCAATGAAGAATTTCTCAAGAAGAAGTCCAACTCTGTTGAGCACCTTCTGTCAGGTGCCAAAATGATGTATTTCCTGGATAACTCAAGGCAAGAGAAAGCCATCTCCATAGCCACACAACTGGATGAAACCATGTCCGACAGAAATGTAAAGACGTGCACCAAGGTCTTGGAAGCCCTATTAGATGGGAGTTTTGGGAGTTTACAGTTGCAGGCAGAGGACTATCGTACAGCGTGCCACAAGCTCTTCCCACTGGCCACCGCCTTCATGCCGATGGCTAATGAGGATGACAAGAGCCCCGCCATGAACAATGCTACTATTAATCACGACGTGCTGTCCAATGAAATCTGA

Function

GO: NA

KEGG:

id description
K20792 NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014581 True 2571 mRNA 0.45 20 18645860 18659061

Neighbor

gene id symbol gene type direction distance location
AMCG00014586 NA coding upstream 7256 18636706 ~ 18638604 (+)
AMCG00014582 wbp4 coding upstream 13170 18626559 ~ 18632690 (+)
AMCG00014580 NA coding upstream 21271 18610560 ~ 18624589 (+)
AMCG00014583 NA coding upstream 36416 18586434 ~ 18609444 (+)
AMCG00014575 NA coding upstream 165828 18478409 ~ 18480032 (+)
AMCG00014584 NA coding downstream 3147 18662208 ~ 18667126 (+)
AMCG00014587 NA coding downstream 9745 18668806 ~ 18674332 (+)
AMCG00014592 NA coding downstream 122996 18782057 ~ 18786527 (+)
AMCG00014591 dgkh coding downstream 144345 18803406 ~ 18845971 (+)
AMCG00014596 akap11 coding downstream 194247 18853308 ~ 18878273 (+)
G71038 NA non-coding upstream 167832 18477043 ~ 18478028 (+)
G71036 kctd12 non-coding upstream 177525 18465219 ~ 18468335 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 994858 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 1155253 17489826 ~ 17490607 (+)
G70897 NA non-coding upstream 1294908 17349436 ~ 17350952 (+)
G71136 NA non-coding downstream 29487 18688548 ~ 18692633 (+)
G71183 NA non-coding downstream 242164 18901225 ~ 18902161 (+)
G71237 NA non-coding downstream 388897 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 559256 19218317 ~ 19222919 (+)
G71362 NA non-coding downstream 1265841 19924902 ~ 19925198 (+)
G71004 NA other upstream 371500 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1158810 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2176651 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2506828 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 2959961 15675631 ~ 15685899 (+)
G71525 NA other downstream 4196281 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8245816 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 9176442 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 9209642 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9643312 28302373 ~ 28304073 (+)

Expression


Co-expression Network