AMCG00014585


Basic Information

Item Value
gene id AMCG00014585
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18639812 ~ 18644670 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014585
ATGAAGAACTGGGCACGTTTGTGTAGCACGTATTTCTGCAGATGCAGTTTGGGCCATGCTGTGCCGGGACGCAATGTAAGGCTGCACGCATCCCGGACGCATGCTCTGCAGCAGCGGTGCCCCCCCCGCACCAGCGGCCCTGCACAGGCATTTGCAAGACACCAGCAACGGCAGTGCCACAGCAATCACCCAGAGCTGTTAAAGCAAGACACCGTGCAGACCTATTTGAATGgcctgatggaggagcagcagcTGATCGGCCGCAGGTTGCAGGACCCGGCGCTGAGCGACTGTGAGCGCAGAGGGCTGAGCCGGAGACAGCTCGACCTGTCCCCCTTGGCCAGTGCATTTCAAGAGCTGCAGTGTGCGGTACAAGACCTAGTGGAAATGGAAACGATTCTCCACAGTTCAGAGAGAGAAGATGACCAATTGCTGGCGCTAGTGAAGGAGGAACAAAATCAGATTGCGAAATGTATTGAAACGCTTCAAgggaaaCTGCTAGAGAAGTTGGTGCCGAGTGACAGACACGATGCCAGGGATGTTATCTTGGAGGTGGCAGCAGGAAGAACCACAGGAGGTGACATATGCCAACAGTTTACAAGAGAAATCTTTGAAATGTATCAGAATTTTGCAAGCTACAAAAATTGGGAGTTTGACGTTCTCAATTACACTCCAGCCGAGTATGGTGGATTGCATCATGCAGCTGCGAGGATTTCAGGGCAGAGGGTTTATAGGAATTTGAAGTATGAAGGTGGCACACACAGAGTTCAGAGGATCCCCGAGACTGGCCTGTCTTCCAGAATGCAGAGAATTCACACAGGAACCATGACAGTTATTGTGCTGCCCCAGCCCAATGAGGTCGATCTAAATATAGACTCCAAGGATTTGCGAATAGATACATTTAGATCCAAGGGAGCAGGTGGTCAGAGTGTCAATACAACAGACAGTGCCGTTCGGATTGTCCACATTCCCACTGGCAAGTACTTACATTGGATAACAGTCGAGTGCCAGCAGGAGCGTTCCCAGCTACAGAACAGGGACACCGCGATGAGGATGCTGAGAGCTAAAATGTATCGGCAAATAACAGACAGAGAAACCGAGCAAAGGCACAGCGCCCGCAAACTCCAGGTGGGAACCCGGTCCCAGTCAGAGAGAATCCGCACCTATAACTTCACTCAGGATAGAGTCAATGATCACAGGATCGGGTATGTTGCTCGAGATATCAAGGAGTTCCTGAGAGGAGGAGAGCCCCTGGATGAGCTGATCAGGGAGCTCCTGAAGTGTGCGCAGAAGGAAGCTCTACTCGAACTGATAGAAAACAGCAGCCAGAGAAAATCTGGGCACTTCTGA

Function

GO:

id name namespace
GO:0006415 translational termination biological_process
GO:0005737 cytoplasm cellular_component
GO:0016149 translation release factor activity, codon specific molecular_function

KEGG:

id description
K02835 prfA, MTRF1, MRF1; peptide chain release factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014585 True 1350 mRNA 0.52 9 18639812 18644670

Neighbor

gene id symbol gene type direction distance location
AMCG00014579 mycbp2 coding downstream 82524 18489550 ~ 18557288 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding downstream 152532 18485261 ~ 18487280 (-)
AMCG00014577 zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427 coding downstream 161890 18475543 ~ 18477922 (-)
AMCG00014578 kctd12 coding downstream 171530 18467410 ~ 18468282 (-)
AMCG00014570 NA coding downstream 316113 18318085 ~ 18323699 (-)
AMCG00014588 vwa8 coding upstream 51405 18696075 ~ 18709409 (-)
AMCG00014589 vwa8,LOC107579031 coding upstream 76135 18720805 ~ 18766660 (-)
AMCG00014590 vwa8 coding upstream 132106 18776776 ~ 18777608 (-)
AMCG00014593 NA coding upstream 287467 18932137 ~ 18946921 (-)
AMCG00014597 NA coding upstream 326766 18971436 ~ 18999017 (-)
G71016 NA non-coding downstream 308712 18329197 ~ 18331100 (-)
G70954 NA non-coding downstream 635789 18003810 ~ 18004023 (-)
G70898 NA non-coding downstream 1288840 17349436 ~ 17350972 (-)
G70876 NA non-coding downstream 1355236 17284319 ~ 17284576 (-)
G70731 NA non-coding downstream 2170584 16465779 ~ 16469228 (-)
G71133 NA non-coding upstream 19594 18664264 ~ 18664631 (-)
G71157 NA non-coding upstream 24131 18668801 ~ 18669655 (-)
G71160 NA non-coding upstream 41828 18686498 ~ 18687346 (-)
G71174 NA non-coding upstream 206054 18850724 ~ 18851111 (-)
G71179 NA non-coding upstream 229935 18874605 ~ 18878253 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 617717 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 1018661 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1177522 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1901935 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5506061 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 557133 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 573052 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3581254 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8640750 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 8691025 27335695 ~ 27369527 (-)

Expression


Co-expression Network