AMCG00014586


Basic Information

Item Value
gene id AMCG00014586
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18636706 ~ 18638604 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014586
ATGGCCTCAGTTGCAAGCTATTTCAGTGGCCCAGAGGAGCTGGAGGATATTTCCCACGCTGGAAGTTTGCTGAAGGAGCTCAAGTGTTTCTACGATGCCAAACTGTTAGTGGACGTGACCATTGAAGTGGAGTCGCCGGACCTTGAGCAGCCCCGGGCGGCGGAGAGGAGCAGCGGCGTCGGGGTGAATCATGGGTCGGGGAAGCTGTTCCCTTGCAACCGCAACATCCTGGCGGCGGCTAGTCCATACTTCAAAAGCATGTTCACAGGGGGTCTGTACGAAAGCAAGCAGAAGAAAGTGACCATCCACGACGTGGATGCCGAGTCCATGTCTCTGATCATTGACTACTGTTACACGGGCAAGGTGACCATCACAGAGGCCAATGTGCAGAGACTGTATGCGGCCGCCAACATGCTGCAGCTGGAGTATGTGAGACAGTCCTGCTCCAACTTCATGACCCGGAGGCTCGACCTCTCCAACTGTGCTGGGATCCTGAAGTTCGCAGACACCTTTGACAATCACGATTTGAAAGCCAGGGCTCAGATTTTCGTGGCCAGGAATTTCCAGCACTTCTGCAAGAAGGGCAAAGAGCTGTGTGAATTGACTCCGACTCAGATCAAAGACATCCTGTCGCTGGATAGTCTGGATGTGGACAGTGAGAGGAAGGTGTGTTCGGTAGCCATGCAGTGGATGGAGGCCAACGAGAGTGAGAAGGCGGGGAGCGCGCTGGAggtgctgcagtgtgtgcggTGGCATCTTTTTACAGAAAAGGACAAGGTGTACATTGAGGGGCTGAAGGCACAGCCCTTCATTAAGAATCACTGCATGGGATTTATTGAGTCTGTGACAGGAGAGGAAGGCACTGTGGTCTCTGCAGGTGTGGAAAACCCAACGGAGAGAATAGGCATGAATGCTAAGGAAATGATCCTATTCTTTGGCCACCCCAAGGAACCGTTTTTGTGCTATGACCCCTACACTGGAGATATTTTTTCCATGGTGTCACCTTTGACCAACCTTGCTCTCAACAAGTCAATGGACaccttttctgtttgtgtctcaCCTGAAAATGACCTTTATTTAGCCTCGCAGCATTCAAAGCATTTCTGGGTGTACAATGCCATGCTTAACAGCTGGCAGGAGCTGGCAGAAAGACTGTTGGGCAGGGTGCACATGGACATCGGCTACCTCAGCGGGCACCTCTTCATCTTGGGTGGACGCGACCCTTTGACAGATGCCCGACTGAAAGATGTGGAGTGTTACAGCATTCAGAGGAACCAGTGGGTGTTCGTGGCTCCTCTGCCTCATTccctggggaaaataaaaattgtgacGGTGAACGACCACCTCTATGTGGTGAACAACAGAAGGATGCTTTGCTATGACCCTGACAAGGACCAGTGGCTTAACTGTGCTTCTCTGAAGAGGAGTGAATTTCACAAAGCCTGTGTTTACCAAGACCAGATATTTTGCATATGCGACATCCCGGTCATGAAGGTTTACAGCCCTGCCCGGGGTGAGTGGAGGAGGATTGGGGACATTCCTGTGGATGGCAATACGCACAATTACCAGGTGGTCCAGCATGGGAATAAACTGATGCTCATTACTACCACCATCCCTCACCGGAATAAAAACCGGGTCACCATCCACGAGTACGACCCCGCTAGGGATTTGTGGAAAAACATGGGAACAATGCTGGGGTCACTGAACTATGCCTTGTCCTATGgctttatttgtctttctgcTCGCATATACCCAGCCTGTCTGGAGTCAGGGCAGAACTTCTTCACCGAAGAGGATGACGACTGCAGCGGCTCCAGCGCCGATTGGGACTTTGACGGGTTGACTGACGCAGACTCCGAGTCGGGCAGCTCCAGTTCGTTTTCTGATGAAAACTGGTAG

Function

GO: NA

KEGG:

id description
K10474 KBTBD6_7; kelch repeat and BTB domain-containing protein 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014586 True 1899 mRNA 0.52 1 18636706 18638604

Neighbor

gene id symbol gene type direction distance location
AMCG00014582 wbp4 coding upstream 4016 18626559 ~ 18632690 (+)
AMCG00014580 NA coding upstream 12117 18610560 ~ 18624589 (+)
AMCG00014583 NA coding upstream 27262 18586434 ~ 18609444 (+)
AMCG00014575 NA coding upstream 156674 18478409 ~ 18480032 (+)
AMCG00014573 NA coding upstream 161522 18470551 ~ 18475184 (+)
AMCG00014581 NA coding downstream 7256 18645860 ~ 18659061 (+)
AMCG00014584 NA coding downstream 23604 18662208 ~ 18667126 (+)
AMCG00014587 NA coding downstream 30202 18668806 ~ 18674332 (+)
AMCG00014592 NA coding downstream 143453 18782057 ~ 18786527 (+)
AMCG00014591 dgkh coding downstream 164802 18803406 ~ 18845971 (+)
G71038 NA non-coding upstream 158678 18477043 ~ 18478028 (+)
G71036 kctd12 non-coding upstream 168371 18465219 ~ 18468335 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 985704 17650771 ~ 17651002 (+)
G70908 NA non-coding upstream 1146099 17489826 ~ 17490607 (+)
G70897 NA non-coding upstream 1285754 17349436 ~ 17350952 (+)
G71136 NA non-coding downstream 49944 18688548 ~ 18692633 (+)
G71183 NA non-coding downstream 262621 18901225 ~ 18902161 (+)
G71237 NA non-coding downstream 409354 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 579713 19218317 ~ 19222919 (+)
G71362 NA non-coding downstream 1286298 19924902 ~ 19925198 (+)
G71004 NA other upstream 362346 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1149656 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2167497 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2497674 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 2950807 15675631 ~ 15685899 (+)
G71525 NA other downstream 4216738 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 8266273 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 9196899 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 9230099 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9663769 28302373 ~ 28304073 (+)

Expression


Co-expression Network