AMCG00014588 (vwa8)


Basic Information

Item Value
gene id AMCG00014588
gene name vwa8
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18696075 ~ 18709409 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014588
attACAGTACAGAAAGACAGTGGCTTAGATGTGAGTTCTCCTAAACATGGCAAGATGGACTCAAGCAATGCACCACATGTCGGTGGAAATATGTGGGCTGGCGGTACAGGAGGCAGAGACACCGCCGGGCTGGGGGGGAAAGGAGGCCCCTATCGGCTGGACGCTGGACACAAGGTTTATCAGGTGTCACAGGCGGAGAAGGACGCTGTGCCTGAGGAGGTGAAAAGAGCCGCCAGAGAGATGGCTGAGAAAGCCTTTAAAGACAGACTGAAGGAAATTCAGATGAGTGAATTCGATGCAGCCACCTATGAGAGATTCTCTGGAGCCGTCAGACGTCAAGTGCAGTCTTTGCGAATCATCTTGGACAGTCTACAGGCGAAAGGGAAAGAGAGGCAGTGGCTGAAGAACCAGGCCCTGGGAGAACTAGATGATGCCAAAATCATTGATGGGTTGACTGGGGAAAAGACCATCTACAAACGACGTGGGGAACTGGAACCCGAGCTGGGGACCCCTCAGCAGAAGCCAAAGCGCTTGCGGCTGCTGGTGGACGTCTCTGGGAGCATGTACCGCTTCAACGGGGTGGACGGCAGGCTGGAGAGGTCCATGGAGGCGGTGTGCATGGTGATGGAGGCCCTGGAGAGCTATGAGCACAAGTTCAAGTATGACATTGTCGGCCATTCGGGCGATGGCTTCAGCATAGAGTTGGTCAGGTGTGACAAGATCCCAAAGAACAACAAGCAGAGATTAAAGGTTCTGAAGACAATGCATGCCCACTCACAGTTCTGCATGAGTGGCGACTACACGCTGGAGGGCACCGAGCACTCTGTGAAGGAGATCGCCCGAGAGCAGGCCGACGAGCACTTTGTCATTGTTCTGAGCGATGCCAACCTGGAGAGGTACGGCATCAGCCCAGACCGCTTTGCTCAAGCCCTGACCTGCAATCCACAAGTCAACGCCTTTGCCATATTCATAGGCTCCCTGGGGGATCAGGCTGAAAGGCTGCAGAGAACACTGCCAGCCGGACGATCTTTTGTCGCTATGGATACCAAGCAGATCCCACAAATCCTACAGCAGATCTTCACTTCCACGATGCTGTCTAATGCCTGA

Function

symbol description
vwa8 Predicted to enable ATP binding activity. Predicted to be located in mitochondrion. Orthologous to human VWA8 (von Willebrand factor A domain containing 8).

NR:

description
PREDICTED: von Willebrand factor A domain-containing protein 8

GO:

id name namespace
GO:0005524 ATP binding molecular_function
GO:0016887 ATPase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014588 True 1107 mRNA 0.54 8 18696075 18709409

Neighbor

gene id symbol gene type direction distance location
AMCG00014585 NA coding downstream 51405 18639812 ~ 18644670 (-)
AMCG00014579 mycbp2 coding downstream 138787 18489550 ~ 18557288 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding downstream 208795 18485261 ~ 18487280 (-)
AMCG00014577 zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427 coding downstream 218153 18475543 ~ 18477922 (-)
AMCG00014578 kctd12 coding downstream 227793 18467410 ~ 18468282 (-)
AMCG00014589 vwa8,LOC107579031 coding upstream 11396 18720805 ~ 18766660 (-)
AMCG00014590 vwa8 coding upstream 67367 18776776 ~ 18777608 (-)
AMCG00014593 NA coding upstream 222728 18932137 ~ 18946921 (-)
AMCG00014597 NA coding upstream 262027 18971436 ~ 18999017 (-)
AMCG00014601 tsc22d1,LOC107551985,LOC107713726,LOC107688650,LOC107748883 coding upstream 404958 19114367 ~ 19122826 (-)
G71160 NA non-coding downstream 8729 18686498 ~ 18687346 (-)
G71157 NA non-coding downstream 26420 18668801 ~ 18669655 (-)
G71133 NA non-coding downstream 31444 18664264 ~ 18664631 (-)
G71016 NA non-coding downstream 364975 18329197 ~ 18331100 (-)
G70954 NA non-coding downstream 692052 18003810 ~ 18004023 (-)
G71174 NA non-coding upstream 141315 18850724 ~ 18851111 (-)
G71179 NA non-coding upstream 165196 18874605 ~ 18878253 (-)
G71284 NA non-coding upstream 481976 19191385 ~ 19191632 (-)
G71290 NA non-coding upstream 503235 19212644 ~ 19214404 (-)
G71291 NA non-coding upstream 505205 19214614 ~ 19215246 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 673980 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 1074924 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1233785 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1958198 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5562324 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 492394 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 508313 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3516515 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8576011 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 8626286 27335695 ~ 27369527 (-)

Expression


Co-expression Network