AMCG00014589 (vwa8,LOC107579031)


Basic Information

Item Value
gene id AMCG00014589
gene name vwa8,LOC107579031
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18720805 ~ 18766660 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014589
ATGTTTGATGACCGGCCCTGGTGCGTATTGCTGAAGGGGTGCTGCCTGCTCTCTCCACAGTGTGCGGTGCGCGCCGCCACACAGGGCCGGGTCTTGGTACTGGAGGGTCTGGAGAAGGCAGAGCGCAATGTCCTGCCTGTCCTCAACAACTTGCTGGAGAACAGGGAGATGCAGCTGGAGGATGGACGCTTCCTCATGTCAGCCCAGAGATATGACAAACTGCTCCAGGAGCACACAAAAGAGGAGCTGGACACCTGGAAGATAGTGCGAGTGAGTGAAGATTTCCGAGTCATTGCCCTGGGTTTGCCTGTTCCCAGATACACAGGGAACCCCCTGGACCCTCCCCTCCGGTCACGTTTCCAGGCCAGGGACATCTTCTACCTGCCTTTCAAGgacCAGTTACAAGTTCTTTATGATGTTGGACCAAATGTTCCATCAGAGAGAGTGTCCCAGCTCTTGTCGCTGGCTACCACTCTGTGCTCTCAGGAGTCGTCTAACCTGGGTCTCCCAGACTTCCCAGTGGACAACCTGCCTGCCGCAGTGAAGGTTCTGGATTGCTTCCCCATGCTGTCCTCCCAGCAGCTGATCCAGAGACTGTACCCATACGAGTCCATGCTGGGAAAAGAAGGCCGAACTGCAGTGGAGGACGCTCTGAATAGATTCGAACTCTCTGATTCAGGAAAGGACCGTTTCCCCCCAGGAGTGATTAAAGTTGAAGAGCTCAGCAGTGATGAGATCAGACAAGCAGCTGTCACTCTCCAAATTGCAGACAAAGAAGTCACTTTTGAGGTCCCAGCTGGAACGAGAGCTTTGCGGCCCCACTTGGGAAGCCTGAACTTCATCAGAACTCCGAGCCATGACCGCCTGCTGGCTGAGATGATGCAGTCCCACATGGTCAAAGATATGTGTCTGATTGGTGCAAAGGGATGTGGGAAATCTGTGATTGCTAAAGAGTTTGCTGAGATGTTAGGATATCACATTGAGCCCATAATGCTGTATCAGGATATGACGGCCAGGGACCTGCTGCAGCAGAGGTTCACCCTGCCCAACGGGGACACGGCCTGGAGGCCCTCTCCCCTGGTCACTGCTGCCCAGGAGGGGAAGCTGGTACTGCTGGATGGCATTCACCGGGTCAACCTGGGCACCCTGGCTGTGCTCTCCAGATTAATCCATGACAGGGAGCTGGCTCTCTATGATGGAACCAGGCTTCTTCGGTTGGACCGGTACCAGTCCCTGAAGGAGGAGCTGCTGCTCTCGGAGGAGGAACTACAGAAAAGGTCTATCTTTCCCATCCATCCCTCTTTCCGAATCGTGGCCCTGGCAGAGCCTCCGCTGGTGGGAAGCAGCTCACAGCAGTGGCTTGGGCCAGAGCTCCTCACCATGTTCCTGTTTCACCCTGTCAATCTCTTGGGCATGGCGGAGGAAGCTGAGGTCATCAGAGGAATGACGCCAAATGTTCCGAAGGAGGCGGTGGATCAGCTGCTGTATTTAACCCACAGATTGCGACAAACAAACGACCCCACAgcTCAATCATTAGCCTCATCTTTATCCACTAGACAGCTGCTGAGAATCTGCCGTCGTCTGTCTCAGTATCCAGAAGAGAGCATTTCCCACTCCATTAATAAAGCCTGTCTCTCCAGGTTTCTGCCAAGCCTTGCACGATCTGCATTGCACAAGAATTTGGTCAGCTGTTCAATTGAAGACAATTCGGAAGAGCTGTCACAGCAACAGGAGAAGGATGTCACTTGCGAAATAAAAGATGGGACATTGAGAATCGGAAAGGTTTCAGTTCCTGTCTATAATCCCGATGAGAAGATGAAGGTGCCTGATGTCCTCTTCTATGAAAATGCTCAGCACATGATGGTAATGGAAGACATGTTGAAGGACTTTCTGCTGGGGGAGCACCTCCTGTTGGTGGGGAACCAGGGTGTGGGGAAAAACAAGATCGTTGACAGATTTCTGCATCTCATGAATCGACCCCGGGAGTACCTTCAGCTTCACAGGGACACGACTGTACAGACTCTCACCCTGCAGCCCTCTGTTCGCGACGGTATTATTCTTTATGAAGACTCACCCCTGGTGAAAGCAGTGAAGATGGGACACATCTTGGTTATAGATGAAGCTGACAAGGCCCCCACGAATGTCACCTGTATTTTAAAGACTCTGGTCGAGAGTGGAGAGATGATTCTTGCAGACGGAAGAAGAATTGTATCAGACCCCTCTGTTGCAGAAGGAAGGCCTGGTGTCATTGTAATGCACCCTGGTTTTAGGATGTTGGTGCTGGCAAACAGGCCTGGATTTCCATTCCTGGGAAATGATTTCTTTGGTGCTTTAGGGGATATATTCAGCTGCCATGTAGTGGACAACCCTAAGCCACAGTCAGAGCTGGCCATGCTGAAGCAGTATGGGCCAGATGTCCCGGAGCCAGTCCTTCAAAAGCTGGTCGCAGCGTTCGGAGAGCTGAGAGCCATGGCTGACCAGGGAACTATCACCTACCCCTACTCTACCAGAGAGGTGGTGAATATTGTCAGACATCTACAGaaATTCCCTGATGAAGGCCTTGCAAATGTCGTGCGGAACGTCTTCGACTTTGATTCCTACAACAAAGAGATGCGCGAGATTCTCATTGCCTCTCTGCACAAACACGGCATCCCTATTGGCGCCAAGCCTACCAGTGTGCACCTGGCTAAGGAGTTCCCATTACCAGAGTGCAGACTTGCAGGATATTGGACAACAAACCAAACAGGAAATGCCCGTCGCAAGATGTTGTACCCTACTGAGTCCCACCAAATAGACATCAAGGGCCCAGTATTTTTAAGGGTTCAGGGGTATCCTTTAGAACGACATGAAGCCAGAGCCCTCAGCTTCACTGAAGAGCAGAACCACTGGCAGATCCCAATGAATGACATCAACATTGTCTGTGATGTGACCACAGCAAGCGACACTATTTATGTGGCTACTTGCAACCCTGTGTCCCTGTACTTTATGAAGGAGCGTGGAGACACTATACACTGCATGGACCTTTATGATGTCTTCCCGAGGACTATCAGTGGCGTGTGGCAGCCGTTCATCACAGCAGCTGCTCTGGGCGGCCCACTGGAGTCTCAAGTGGTGCTGCACGAGGAACAGagTAATACGGTGCTGCATTTGGATCTCACCACCGGAGCTGTGCGACGCCTCATGCTTTCGCAGGAAGGGGAGGAGCCGGCCAGGAAGTCATCCTGGTGGAACAGCAAGGAGAGTCAGGgtgctttcaaaatgtgtaaagaGTTTTCTCACAAGAACTGGCTTTTGTTCTACAAAGAAGATGGAAACCAACTGGATGTGCTGGACGCGTTAGAAGGTACAGCTCACACCATCTCCCTGCCAATCAATCTGAAGTCTGTTTTCCTTGTGGCGGAGGACCGCTGGCTCCTTGTGGAAAGCAAGACCAACAAaAAGTTCTTGCTGACCAAGCCAATGCACATGGGAGCTGAGGATTCTGGGATATGCCAGCTTCATACCATTACAGAGGATGCCGTCAGCACAGGCTTTGGAATGACATCAGGTGTGGACCTGTCTGCGCCACAGTTGGTGTCCAGCGATCAGTTGCCACCCGAGAACCTGAGTGCAGCCCTGGGGCAGAAGATCGTCTCTCCCAACAGGGTTCTGTCTGATGTCAACACCTTCGCCACTCTCGTCATTGGCTTCCCGGACCTCATGTCGCCCAATGAAGTGTACAGCTGGAAAAGAAAGTCTGATCTGGGGGGAACAAGTTCATCCGATGCGTTCTTCAGTGGAGGCCGCAGGACAGGCACTGCGAAACGGGCTAACTGCGTGAGCCTGCTGGGAGCCAACCAGGTTGTCCGAGCCCTGCCTGCCAGTGAAGTGCCCCTGTCTGACATCTACCCCAAAGacatCACACCTCCACAGACTGCTGCTTATCTGGAAGTCACAGATCTTAATtcaaagaaagtaaaatatattcctGTTCcaagGTCCATGACTCTCTCCCCCTACACCACCTGGCTATCCAAGGTCTCTGACACAGATGTGCTCCTGGCAACTTTGGGCAGTGCTAGTCTGGTAACAGTGGACATGGGTGGATATGTGAGGCTGTGGGAAACTGGATTGGACAGCCTGCAGCGCTCCCTGCTGGAATGGAGGAACATGATTGGAGCAGAGGATGGCAGACCTGTGCAGAATAACATAAAGAAAATATGA

Function

symbol description
vwa8 Predicted to enable ATP binding activity. Predicted to be located in mitochondrion. Orthologous to human VWA8 (von Willebrand factor A domain containing 8).

NR:

description
PREDICTED: von Willebrand factor A domain-containing protein 8

GO:

id name namespace
GO:0005524 ATP binding molecular_function
GO:0016887 ATPase activity molecular_function

KEGG:

id description
K24512 VWA8; von Willebrand factor A domain-containing protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014589 True 4203 mRNA 0.52 34 18720805 18766660

Neighbor

gene id symbol gene type direction distance location
AMCG00014588 vwa8 coding downstream 11396 18696075 ~ 18709409 (-)
AMCG00014585 NA coding downstream 76135 18639812 ~ 18644670 (-)
AMCG00014579 mycbp2 coding downstream 163517 18489550 ~ 18557288 (-)
AMCG00014576 fbxl3,fbxl3a,LOC107703114 coding downstream 233525 18485261 ~ 18487280 (-)
AMCG00014577 zgc:162944,LOC108424409,LOC103034916,LOC107705163,LOC107658212,LOC108266838,LOC107597427 coding downstream 242883 18475543 ~ 18477922 (-)
AMCG00014590 vwa8 coding upstream 10116 18776776 ~ 18777608 (-)
AMCG00014593 NA coding upstream 165477 18932137 ~ 18946921 (-)
AMCG00014597 NA coding upstream 204776 18971436 ~ 18999017 (-)
AMCG00014601 tsc22d1,LOC107551985,LOC107713726,LOC107688650,LOC107748883 coding upstream 347707 19114367 ~ 19122826 (-)
AMCG00014602 tsc22d1,LOC107713726,LOC107551985,LOC107748883,LOC107576221 coding upstream 393269 19159929 ~ 19162787 (-)
G71160 NA non-coding downstream 33459 18686498 ~ 18687346 (-)
G71157 NA non-coding downstream 51150 18668801 ~ 18669655 (-)
G71133 NA non-coding downstream 56174 18664264 ~ 18664631 (-)
G71016 NA non-coding downstream 389705 18329197 ~ 18331100 (-)
G70954 NA non-coding downstream 716782 18003810 ~ 18004023 (-)
G71174 NA non-coding upstream 84064 18850724 ~ 18851111 (-)
G71179 NA non-coding upstream 107945 18874605 ~ 18878253 (-)
G71284 NA non-coding upstream 424725 19191385 ~ 19191632 (-)
G71290 NA non-coding upstream 445984 19212644 ~ 19214404 (-)
G71291 NA non-coding upstream 447954 19214614 ~ 19215246 (-)
AMCG00014567 mzt1,si:dkey-15d12.2 other downstream 698710 17990651 ~ 18022095 (-)
AMCG00014559 NA other downstream 1099654 17589267 ~ 17621151 (-)
AMCG00014555 LOC103136798,LOC106917865,LOC103473267,LOC106919874,LOC103148706,LOC108242195,LOC100692262,LOC101156309 other downstream 1258515 17446868 ~ 17462290 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other downstream 1982928 16722073 ~ 16737877 (-)
AMCG00014412 LOC106574775,LOC107704546 other downstream 5587054 13087608 ~ 13133751 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other upstream 435143 19201803 ~ 19203567 (-)
AMCG00014603 tpt1,LOC106582181 other upstream 451062 19217722 ~ 19225230 (-)
AMCG00014630 LOC107672672 other upstream 3459264 22225924 ~ 22244915 (-)
AMCG00014693 NA other upstream 8518760 27285420 ~ 27304597 (-)
AMCG00014692 LOC107756725 other upstream 8569035 27335695 ~ 27369527 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000080_04015144_04135541 VWA8 coding CI01000080 null 4015144 ~ 4135541 (+)