AMCG00014595 (dnajc15)


Basic Information

Item Value
gene id AMCG00014595
gene name dnajc15
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 18949313 ~ 18963043 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014595
TTTGTCCAATGCGGCGTTCCGTACGTGGTTAAATGTCCTTGAGTCAGTGAGAGTAGAAAGCATGGCGAATGAAAATATAGGGATGGACGGGGCACTCAAATACCCTGAATACGCTCCCAAATCAAACAGCAGGAGCGATGCAGATATTGACAAAAGAGTAGGCGGGACGTTAATTGCTGTCGGTCTTGGCGTTGCAGCTGCAGCGTTTGCAGggCGATATGCATTCCAGCTCTGGAAACCTTTAGGACAAGCCATTTCTGAAACAGCGAAGAAAATGCCAGCTTCTGCTTTCTCTTCTTATTACAAAGGAGGATTTGAGCAGAAGATGACGAGACGAGAAGCCAGTCTGATTTTGGGTGTAAGCCCAACAAGCAACAAGATGAAGATAAGAGAGGCCCACAGAAGGATTATGGTTTTAAATCACCCTGATAAAGGTGGATCGCCCTATTTGGCAGCAAAAATCAACGAAGCGAAGGACCTTCTGGATTCTATCTCTCGGCAATAACAGTTTTTGTCACAAGATCAGCGGACAGCAGATGTTCATTTCCTCTTCAAAACTGACTCTCGTCCCTTACATTCCTTCGTAAAGGAATTGCACACAGAGGAAATATCAAAGCTGAATTTATTGTATGAACTGGGTCACAATGTGGTCTGTTTTCAGTACGTGTCCCTGCTGGACTGCTGCAGTAGAAATGCTACACATTGCCTCCGAGTCAACAGGAGGAAACTGACTGAAGCACGGTCTTGTCATTTTTCATCTGATTTTAATGATCCCGGTTACTAAGGTGCACTTTATTAGGAAGGCTGCCGTGAGTGTGCCAGGATGTGTAGACATACTAGCCAGTTTGAATTACTCCCAGTGTTTTTTGAGGGTTGTGAAGCAGCACTAATCTATCCTGATAACTGAGACTGAATGTAATGAAGATTGTCCATGTCTGAAGGCCTGCGGAAAAGAATATCACTTATTTTAGatacagaaatagttatgcAAGAAGATCCATTTACCCTTTGACGGGAGCAAAATTAAACCTGCTCATCTATATTCATGgtgcttttacatttgtaaagaaGTGGATGCTTAggttttaagtttaaataaagagacacaaatcaaaacaaatactaaGAATGGTCCAAAGCAGGAATTATGAAACACTGGGAAAACTGCTTGGCACTTAACCTTCGTCTAACATTAATAGCGTCTCATTGCAGCACACTGgaaaaatgcttcaaaactaaTGTTAAATCTTCTAGAACTGACAACATGTGAACACAGACCTGCATGGCAGAGCACCACTGTGTCTTCCATTTGTGCTCTTAAAGTGCACATACTGTATTTtcagcaataaaaaaacaatagctcGCTTGCTTTGTTTCTCATCATTTTGTGGGTGATACACAGATGTTGAGTGCACTTTGTATTCAGTCATTAACCTGTGCTCAGTAAGTTTCCTGCTCCCCCAGCCCTGCAGTCTTTTAATCTATCCATGgccaatattaaaatattcttaaatatgaacGTCTGGTGATATTCTGTGTTACATTAGTGGAGTCATGTGACTGGAGACCCAGCCCTTTCAAGCTATATTTTCCTATCTCTACAAGTATTGGAAGCAGATGTCTATTTGTGTCTAGACCCGGCGATTTCATTGTTTGGCGTTTTACTGGTTGTTGCGCTTCACTTCCAAAGATGAAGGTTATGAAGTTATTTGAGTTTGCTGTATAATGTATCAaactttaatcaaataaatgtgttgttttcctgGGA

Function

symbol description
dnajc15 Predicted to enable ATPase activator activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of PAM complex, Tim23 associated import motor. Orthologous to human DNAJC15 (DnaJ heat shock protein family (Hsp40) member C15).

NR:

description
PREDICTED: dnaJ homolog subfamily C member 15 isoform X1

GO:

id name namespace
GO:0048793 pronephros development biological_process

KEGG:

id description
K09535 DNAJC15; DnaJ homolog subfamily C member 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014595 True 1768 mRNA 0.41 6 18949313 18963043

Neighbor

gene id symbol gene type direction distance location
AMCG00014594 NA coding upstream 49113 18889772 ~ 18900200 (+)
AMCG00014596 akap11 coding upstream 71040 18853308 ~ 18878273 (+)
AMCG00014591 dgkh coding upstream 103342 18803406 ~ 18845971 (+)
AMCG00014592 NA coding upstream 162786 18782057 ~ 18786527 (+)
AMCG00014587 NA coding upstream 274981 18668806 ~ 18674332 (+)
AMCG00014598 NA coding downstream 82640 19045683 ~ 19047641 (+)
AMCG00014599 NA coding downstream 85250 19048293 ~ 19056463 (+)
AMCG00014607 NA coding downstream 221236 19184279 ~ 19190953 (+)
AMCG00014613 NA coding downstream 230376 19193419 ~ 19196839 (+)
AMCG00014612 gtf2f2 coding downstream 251233 19214276 ~ 19216333 (+)
G71183 NA non-coding upstream 47152 18901225 ~ 18902161 (+)
G71136 NA non-coding upstream 256680 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 471285 18477043 ~ 18478028 (+)
G71036 kctd12 non-coding upstream 480978 18465219 ~ 18468335 (+)
G70938 LOC107575789,LOC100846954 non-coding upstream 1298311 17650771 ~ 17651002 (+)
G71237 NA non-coding downstream 84915 19047958 ~ 19048172 (+)
G71283 tpt1,LOC106582181 non-coding downstream 255274 19218317 ~ 19222919 (+)
G71362 NA non-coding downstream 961859 19924902 ~ 19925198 (+)
G71378 NA non-coding downstream 1223571 20186614 ~ 20186966 (+)
G71414 NA non-coding downstream 1961525 20924568 ~ 20924837 (+)
G71004 NA other upstream 674953 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1462263 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2480104 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 2810281 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 3263414 15675631 ~ 15685899 (+)
G71525 NA other downstream 3892299 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 7941834 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 8872460 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 8905660 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9339330 28302373 ~ 28304073 (+)

Expression


Co-expression Network