AMCG00014610 (slc25a30,LOC105911955,LOC100698510,LOC104935787,LOC102198731)


Basic Information

Item Value
gene id AMCG00014610
gene name slc25a30,LOC105911955,LOC100698510,LOC104935787,LOC102198731
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19223781 ~ 19236789 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014610
CGAAACGATGCGCCGTCGTCCGTCCCGCCGGGCTGCATCACTCACAGCAATGAGTGCTCAGGGCGAGTATGCCTGAAATCATTGCAACACATTGGTTGGAGACGCAGCATTTTTGTCTTACAATATTGTAGGTGTTTTAATGAAGCGTGCATTATTTGGAGACCTAATTAGTGCCATCATCgactttgtttcattttgagGGACTGGGCGTGGGAGAATTCACTGGAATCATCAAAAGACTGCTGGCGACCCGATTTATTTAATCACCTCGTAAGGAGAGATTTGCCTTGAAGGTGAAAAATGTCTAACTTAAACTGGAAGCCATTTGTTTACGGAGGTTTGGCTTCTGTAACTGCAGAATGTGgtaCCTTCCCCATTGACCTTACTAAGACCCGCTTGCAAGTGCAAGGCCAGGTCGGTGACAGTAAGTACACAGAGATCCGGTACCGGGGAATGCTGCATGCCTTGGGCAGGATCTGCAGAGAAGAAGGGCTCCTAGCGCTGTACTCAGGGATTGCCCCAGCGATGCTGCGGCAGGCGTCCTATGGTACCATCAAGATTGGCGCATATCAGAGCTTTAAACGATTGCTTGTTGACAGTCCAGAAGATGAGACACTAGTGATGAACATGATGTGTGGGGTGCTGTCGGGGGTGATCTCATCTTCAATTGCAAACCCTACCGATGTCCTCAAGATAAGAATGCAGGCACAAGGAAACGTGCTTCAGGGAGGAATGATTGGAAACTTCATTGATATCTATCAGCAGGAAGGGACCCGAGGTTTGTGGAAAggCGTATCCCTGACTGCTCAGAgggcagccattgtggtgggAGTGGAGCTGCCTGCGTATGACCTCACCAAGAAGCACCTCATTCTCTCGGGATACATGGGAGATACTGTCTATACACACTTTCTATCAAGCTTTGTGTGTGGGCTGGCAGGCGCTCTGGCCTCCAATCCTATTGATGTTGTACGGACCCGTATGATGAACCAGCGGGCTCTACTGGATGGAACGTGTGCTGGCTATAAAAGCACGCTGGATTGCCTGTTGCAGACATGGAGAGCTGAAGGTTTCTTTGCACTGTACAAGGGTTTTTTTCCTAACTGGTTGAGGCTGGGGCCATGGAATATTATTTTCTTCATAACATATGAACAGCTGAAGAAGATTGAGGTTTGATTCTGTGTGCTCGATCTGGCTTGAAGAACGCTTCAAAGAGATCAATTCAGTGGCAtctaatgctttaaaatatcaatcTTTTCTTGTATGTGATGCTAAGTGTGTGCTGCCCTTGGACCGGTTATCATTGGAACAGATGAAAGCTGATGGAAACCATATTGATTCTGAAAGCCAGAAATCAGTACTGTTCTTGTCGTGGCCTTAAAAACAATGATTCTAACTGTAGATGGGGGACATCGTATGGCAGACAGTTTTGTGAATGTTATCCGATGAGAAACTCACTTCTGCCTTTTAACTtgttaggtaaaaaaaaaaaagtgtcatcCTGTTTGGATTTTACTACATTTGCATGTTTCAGTGGTCAGATCAGATTAAGCAGTCTGTACCTCAAACGCACGCAacacttttaatataaaatgtctcCCCTGACCTGTTGTACATTTGGTACATGTTAGTTCATTCAAAATCTTACAGTGGCCTATTAGCCTTCTTTACTAGAAAATTAGCCATTGCTCTATTGTGGCAAAAGATGCTTTGGCACAGTATTTACTTTTGTGGAAAACTCTGTATTGAAGGTTGTAGCATATCTGTGGTAAATATAGATCATAcagattaacttttttttatttctacttgAAAATACATTGTGCATCCTGTAAAGAGACCAATTATATTAGGATTTCCTAATTTTTGAAAAGTTAGTGTGAGCTAGTCCAGATCTTGGATCAGAAAGGTCAGTTAACCTACTTATGCATTTATACAGCCCTGACATCACAAAACATATGTGCTCCTTTTGAGAGAGGAATATTGAACCAGGCCTAcatcaaaaatatgaatggaaatgAATGCACCAAAGATGTTTAGTATGTATGAAGGGCTTACAGTTAAATGATGTTGCAGTTCCTCATGGAGAGGAAAGAACTAGTGGGTGGGTTTGGACACCGATTTGTTTGTGTTCTAGTGAATAATTGTATTGCACCCTTTTAAAAACTGGTggtgttatatttgtttttctaaaaatgtcaATGGAAGTCCATTCTTAATCATTGGAAGAGATGTTACACAGTTGCAACCTACATATATTAAGGAATTTCGatgtaatattttcttgtaaTGTTTCAAAACTTGAATCAACTGTTTTATGCATGTGCCGGCTTTTGAAATTGGCAATTTCTTGTCTAAAATCTGTCACTGCAAACTTCAGTTTCACTATGAGAAGATGGGATCTTgcacataatatatttaaaattgaaatgtaataagtgtgatctttataaaaatataaacccaTTACTGTAAAAGTAATGATGTAGTCTAAGCTTATTGGTAAAACATTGGCAAAATAAACATGGCCGTGAATTCACGAAATTCAGCCCATTTtgcagattgaaaaaaaaaaaaaaggtaattgtCACACTTTCATTATCCCCCAAATATATTATGAATTGCACTTCTGTATAAAGGCCTTGATAAATGTATTGCCTCTTGATGCAGCTAAGCCAAAGATGATATTTTCATACTgcactttaaatgaaaaagctaATCTAACATCATTTTAAGAGTGGGTTAAACAGTGGCAGTTCCCttattcctcttttttttcataGGTGTTATTAAAAGTGTACTTGAATGACGTGCACACGTTGCTATAAAGGCAGATATTTAAAGATTTCATCATTTCATAATAAGTAACTTGCAATTATGTGATCATCAGCCCATTTTGAAGCATTTCTACTGACATGAGGTTAAATGTGTTCTTCTATATTGACTgccagttaattgttttaggtatatgcattattacaattcTTACAACAGATATGAGtaaagtatttttgtatataatacatGTGGGTCTTTGCAGCAGTTTTGCAGTTTATGGTATATTTTACTCATTGCTACTGAGCAGTGTGGAGCATCAGTTAAACTAAACTGTATAAAGGGACCTTcatttcattcctttttttttcccttcttcacACATGCTCTGTTTCTTTGCCAAACACCACCTGCACACTGCATCAAGCATAGCCTACACTTCATGCAGTGCGTGTATATTAacttgttttgtctgtttgacTTTCATAAAAGCTTCAGGTGTGAAACTGACAGTACTGTACTTGGCATAGAGggatatttttatacatgtgttgtggaaaataaataagcaacatGAAAATGTCTTTGAGAAAGATTGTAAAGATAGGAATAAGTATATTAAATTTTTTTCAGTAATGGGAGTTTATTACTATTGTATAAATGTTGTGAACAGGCTGAATATATGTTCACAGTGTATGCTGcaactgttttgtattgttttgtgacAAAATTCAGTGTTTGGCAATATTGCAGTCAATAAAAAGCTTAAGATATTTTGCTATTGATTCA

Function

symbol description
slc25a30 Predicted to enable C4-dicarboxylate transmembrane transporter activity; antiporter activity; and sulfur compound transmembrane transporter activity. Predicted to be involved in anion transport. Predicted to be located in mitochondrion.

NR:

description
PREDICTED: kidney mitochondrial carrier protein 1-like

GO:

id name namespace
GO:0006839 mitochondrial transport biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15106 SLC25A14_30; solute carrier family 25 (mitochondrial carrier), member 14/30

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014610 True 3564 mRNA 0.39 10 19223781 19236789

Neighbor

gene id symbol gene type direction distance location
AMCG00014612 gtf2f2 coding upstream 7448 19214276 ~ 19216333 (+)
AMCG00014613 NA coding upstream 26942 19193419 ~ 19196839 (+)
AMCG00014607 NA coding upstream 32828 19184279 ~ 19190953 (+)
AMCG00014599 NA coding upstream 167318 19048293 ~ 19056463 (+)
AMCG00014598 NA coding upstream 176140 19045683 ~ 19047641 (+)
AMCG00014608 cog3 coding downstream 781 19237570 ~ 19252607 (+)
AMCG00014609 ednrb,LOC108434743,LOC107658690,LOC107566659,LOC105911940 coding downstream 48544 19285333 ~ 19291750 (+)
AMCG00014606 NA coding downstream 59627 19296416 ~ 19317255 (+)
AMCG00014611 LOC107384298,LOC104941757 coding downstream 83080 19319869 ~ 19330918 (+)
AMCG00014605 NA coding downstream 143642 19380431 ~ 19384319 (+)
G71283 tpt1,LOC106582181 non-coding upstream 862 19218317 ~ 19222919 (+)
G71237 NA non-coding upstream 175609 19047958 ~ 19048172 (+)
G71183 NA non-coding upstream 321620 18901225 ~ 18902161 (+)
G71136 NA non-coding upstream 531148 18688548 ~ 18692633 (+)
G71038 NA non-coding upstream 745753 18477043 ~ 18478028 (+)
G71362 NA non-coding downstream 688113 19924902 ~ 19925198 (+)
G71378 NA non-coding downstream 949825 20186614 ~ 20186966 (+)
G71414 NA non-coding downstream 1687779 20924568 ~ 20924837 (+)
G71424 NA non-coding downstream 2074801 21311590 ~ 21312022 (+)
G71452 NA non-coding downstream 2882794 22119583 ~ 22122533 (+)
G71004 NA other upstream 949421 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 1736731 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 2754572 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 3084749 16129479 ~ 16139032 (+)
AMCG00014490 rpl31,cnot11,LOC106575914,LOC105022559,LOC106574971,LOC106582250 other upstream 3537882 15675631 ~ 15685899 (+)
G71525 NA other downstream 3618553 22855342 ~ 22855646 (+)
AMCG00014687 NA other downstream 7668088 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 8598714 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 8631914 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 9065584 28302373 ~ 28304073 (+)

Expression


Co-expression Network