AMCG00014652


Basic Information

Item Value
gene id AMCG00014652
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25565157 ~ 25574008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014652
ATGGCTGCCTTCTGGGTTTTACAGAACTGTAAACAATGGCGCTCTTGTGCGCAGCGCTGCAGGAATGTGGCAGTGGGCTGTGTTGTGAGATGGAACCCATGTCCATACGTGCTGGGCAATGTCATATGCCACCCACTGGGGCTTCTTGGGTGCCTCAGACCGGCGCTCCAATCCAGGCCAGAGAGCAAGATTGTGGGTGACAGGGCTGTTCACAATATAACACAATGCAGCCTTCAAGCCGTCACTTCTGACCGCACGGCACGTCTCTCCTCCCAGGGGGCCGAGCTGCAGACACTTCTGTCACTCCGGCCCCCTTGTCTGCCAGCTGATGTGAACGGCGCCTCGAGCAGTAATGAAGGGAAGGAGCAGAGAGTTCAAGTGGacataatgttttcaaaactctaCTTTCATAAGAACAGGTCCATTCAAAAAGGCCTACGGAGGCTGAAGCACGAGGGGGTTTCTCTAAAGGTGATGGACAAAGAGGACTTtcaaacatgtttatatttgtttgtcgATGAGCACAACACGTTTCAGGAGTGGACTGGACTACACAAAAAGAGTGAGAAGTATTCAGACTATCTGAGAGATATTTTGGAAGAGtgtGTTGGTGATTCTGATCATGGAGATGTTAATCCGGTAGGTCAAGAAGCACAAGAGGCCACTCCACACCAACCACCTACCCAAGGTCAACACAATATTCCAGGAGACCATCTGACCCCTGAACCCACAACAAAACATGGACCTCATGAGTCTGACACTCCGGAGAAATCCCAGCTGGAAGATGGATGTTTTTGCACTGCTACGGGAGTCAAAAGGAAGCTATTCGATGATTAGTGAAATCTTACGAGATAAGTTATGATTAGCTTAATGAGCACAAAACAGCTCTTGTGTAATTGATCAATGTACGATAGATCATGAAGattcttattcttctttttaTCCACATCCCCTGAAAACATTGTCtatgtaaaatgaataatcagataattcacttaaaataatatgaatcacCATCATTTCAGCAAGTGTTACACTTATTTAGACTTacataatttcaaatataaGTATTGGCACCTCTGTGTCTAagttaatttactaaaacatcTTTACTAACACATGCTAGGGTGAATGACTTCTCCATAAACTTAGAATTGGTGCCATTGACaaactttataaaacaatacGTTAATAAAATTACACTTAATACATATGTTAATATTCCCATAAAGagtcattacattattatttctttacgaccgaaaccattaataatgcacacacacatatgctttTTTCTGCTGTACAATCCAGGGTTATGTAGGCACCACACCCTTTGGGGCATCAACATTGACTTGGGAACACCCTCTCTCTGGAGGACTTAAATGAGCAGAATAGTATTACAGTGAACTATCATGTACagttgtattaaattaaattggatCCTTATGAGATTCTAATACACTTGAGATTATGTTTCTCAGCCATGGACAGACTATTATTGACATTCAGCAAagtattcaattatatttattcattgtaaGTGTTAACAGTGGAAACTAAATCCACATCCTGAAAGCAAGCCTTTGTTCCTGGCTAGTAGAACCCATGTAAAATTACATCAAATCCCACTAGGTATGAGTACGTAAATTGTATCAAGGGACTAGGATCCAGTGTACTTGTGTGAATTCTATTATCTTCTTCCAAGACTGTCACATTTGGACTTGATATTGATCaggtttgtttctgtatgtatattatCCAGATGTTGGGTTTTGGATTTCAATTACATTACTCTGTaatatgtgttgttgttttttttgcattatactgtaatatgttttgggattttttttaaatctatcaGCTTACAATAAAATCAGGAATACCTTCAACTGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014652 True 1901 mRNA 0.40 5 25565157 25574008

Neighbor

gene id symbol gene type direction distance location
AMCG00014653 rap2a,LOC101166017,LOC106512668,LOC105907999,LOC105933629,LOC100695037,LOC103391592,LOC106582448 coding upstream 34308 25522226 ~ 25530849 (+)
AMCG00014651 mbnl2,LOC107677847,LOC107653675,LOC107555253,LOC107559795 coding upstream 60154 25479791 ~ 25505003 (+)
AMCG00014649 LOC105024749,LOC106586266,LOC106582445 coding upstream 191085 25373386 ~ 25374072 (+)
AMCG00014648 hs6st3,LOC105898056,LOC102202054,LOC101476457,LOC100690379 coding upstream 319196 25245413 ~ 25245961 (+)
AMCG00014644 dnajc3 coding upstream 401522 25149803 ~ 25163635 (+)
AMCG00014654 kpnb3,ipo5,LOC107677849 coding downstream 1232 25575240 ~ 25592567 (+)
AMCG00014657 NA coding downstream 34980 25608988 ~ 25630854 (+)
AMCG00014655 LOC107559785 coding downstream 86337 25660345 ~ 25698928 (+)
AMCG00014661 gpr18,LOC107740919,LOC107681324,LOC107600424,LOC107748622,LOC107668869 coding downstream 360473 25934481 ~ 25941543 (+)
AMCG00014660 tm9sf2,LOC106574826,LOC107705039,LOC107719731,LOC107654273,LOC107556717 coding downstream 462425 26036433 ~ 26052543 (+)
G71725 NA non-coding upstream 31003 25533342 ~ 25534154 (+)
G71670 NA non-coding upstream 455779 25109156 ~ 25109378 (+)
G71662 NA non-coding upstream 482279 25082659 ~ 25082878 (+)
G71598 NA non-coding upstream 1032196 24523645 ~ 24532961 (+)
G71596 NA non-coding upstream 1231860 24332431 ~ 24333297 (+)
G71763 NA non-coding downstream 131450 25705458 ~ 25762742 (+)
G71772 NA non-coding downstream 171795 25745803 ~ 25748408 (+)
G71784 NA non-coding downstream 196201 25770209 ~ 25770489 (+)
G71817 NA non-coding downstream 378225 25952233 ~ 25959702 (+)
G71826 NA non-coding downstream 436791 26010799 ~ 26011000 (+)
G71525 NA other upstream 2709511 22855342 ~ 22855646 (+)
G71004 NA other upstream 7290797 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 8078107 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 9095948 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 9426125 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 1330869 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 2261495 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 2294695 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 2728365 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 3223041 28797049 ~ 28837910 (+)

Expression


Co-expression Network