AMCG00014661 (gpr18,LOC107740919,LOC107681324,LOC107600424,LOC107748622,LOC107668869)


Basic Information

Item Value
gene id AMCG00014661
gene name gpr18,LOC107740919,LOC107681324,LOC107600424,LOC107748622,LOC107668869
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 25934481 ~ 25941543 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014661
tagatttttttttttttttttttactttaacttttattttaactttttgatGTTTCTTACCAGTGCCTTTCCCCCATGTTATTTACAACactctgaatttgtatttattagcgGACATGTTCACGACCACTGGCTCCTTGGGGCTCTATAAAGCCCCTGTGTCAAAAGGTCTGCTGCTCATCCCAAGTGCTCTAGCTTTTCTACTAACAGTAGTGTTTCCACAGTACCAAACGTTTTTCATATACAACCTTCAAGCTGTTAGAGAAGAGTTACAGGTTTGGAGATTACTATGTGGAAGACTTATTTGCTTGGACCTGAAAGATACATTCTGCAGCAGCCTGCTTATCTACAATTTTCGGATTTTCGAAAGAAGATATGGTAGCCGGAAATTTGCTTCCTTCCTGTTGGGTGTGTGGATTCTATCCGCCCTCTTCGATGCCCTGCTGGCTGAAGCTCTGCGCTCTGTGTTTGGTGTCAAAGTAGTTGCGGTAGAGGATGACGCTGATGACACGGTCCTGGAACTGCTTGGACACGATGTAGTACAGGATGATGTCCAGGCAGGTGCTGAGGTTCATCAGGAAGCTGGTGAAGGCGCCCCAGGTGCTGTAGTCCTGGCCGCTGTTCTCCAGCAGAAGGAAGACGAAGCAGATGTGGAACGGCACAAAGCACACCAGCACCTGGACGATCAGCGTGATGATGATCCTGATGGACTTGTGCTTGACTTTGGGTTTGAGCTTAGAAGTGCGCCCGTGGATCAGGTTGTCCACGATGATACAGTAGCAGCCAATCATGATGAACATGGGCACCAGGAAGAAGAAGACGAGGCGGACGAAGTTCACTGGGTTGTCCTGCTTCAGGTGGTGAAGTTGGACGCCTGGTCGGGATCGTTGTCCGCAAAGAGGAGCGGCGTCGAGCACCCCAGAGACATTATCCACACTCCCACGCACGAT

Function

symbol description
gpr18 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in positive regulation of Rho protein signal transduction and positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in cytoplasmic vesicle membrane and plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GPR18 (G protein-coupled receptor 18).

NR:

description
PREDICTED: N-arachidonyl glycine receptor

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014661 True 950 mRNA 0.48 6 25934481 25941543

Neighbor

gene id symbol gene type direction distance location
AMCG00014655 LOC107559785 coding upstream 235553 25660345 ~ 25698928 (+)
AMCG00014657 NA coding upstream 303627 25608988 ~ 25630854 (+)
AMCG00014654 kpnb3,ipo5,LOC107677849 coding upstream 341914 25575240 ~ 25592567 (+)
AMCG00014652 NA coding upstream 360473 25565157 ~ 25574008 (+)
AMCG00014653 rap2a,LOC101166017,LOC106512668,LOC105907999,LOC105933629,LOC100695037,LOC103391592,LOC106582448 coding upstream 403632 25522226 ~ 25530849 (+)
AMCG00014660 tm9sf2,LOC106574826,LOC107705039,LOC107719731,LOC107654273,LOC107556717 coding downstream 94890 26036433 ~ 26052543 (+)
AMCG00014665 NA coding downstream 144316 26085859 ~ 26123768 (+)
AMCG00014664 zic2,LOC106586042 coding downstream 226918 26168461 ~ 26172474 (+)
AMCG00014667 pcca,LOC107719738,LOC107707835 coding downstream 262340 26203883 ~ 26244458 (+)
AMCG00014668 pcca,LOC107654247 coding downstream 376488 26318031 ~ 26335361 (+)
G71784 NA non-coding upstream 163992 25770209 ~ 25770489 (+)
G71763 NA non-coding upstream 171739 25705458 ~ 25762742 (+)
G71772 NA non-coding upstream 186073 25745803 ~ 25748408 (+)
G71725 NA non-coding upstream 400327 25533342 ~ 25534154 (+)
G71670 NA non-coding upstream 825103 25109156 ~ 25109378 (+)
G71817 NA non-coding downstream 10690 25952233 ~ 25959702 (+)
G71826 NA non-coding downstream 69256 26010799 ~ 26011000 (+)
G71859 NA non-coding downstream 289676 26231219 ~ 26231565 (+)
G71963 NA non-coding downstream 1010753 26952296 ~ 26953253 (+)
G71995 NA non-coding downstream 1085232 27026775 ~ 27027272 (+)
G71525 NA other upstream 3078835 22855342 ~ 22855646 (+)
G71004 NA other upstream 7660121 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 8447431 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 9465272 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 9795449 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 963334 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 1893960 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 1927160 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 2360830 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 2855506 28797049 ~ 28837910 (+)

Expression


Co-expression Network