AMCG00014680


Basic Information

Item Value
gene id AMCG00014680
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26886487 ~ 26890130 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014680
CTCAACTTTTTCTCGCAGCTCTGACCAACGCTTTTCCTCTTTGTGCCTGATTAATATTTCAATGGTTAGTCACACCTGATGAGGACGTCTTGCAGTATCCAGTTGCAGGTATAAAAACAGTCTTTATGGGAGATCAGGTTGCTTTAACACAGACATCGAAAGCAGACAGTACAGACACTAGTTTACACTCACAGAAATGAATAGAATGGAGGTTAAGAGTCAAACTGCGCTCTTCTTGCTATTGCTCTGCTGGGTGGTCGCAATACTGTCCTATCCCACTGGAGCCCCTGTGGGTCAATGTGTGATGATGACTCCAAACCATTCCAACGCGACCCTCTCCAACATGTCTTCTCCCTACTCAGTAACTGTGAATGCATCTACATACGTGCTCGGAGGCATTATAaaagTGTACATAAATTCATCAGTCCCCTATAGAGGTATTTTGCTGGAGGCTAGGGATGTCAACACTTCTGCCATTGTTGGCACTTGGAAAGATCTATcaactaatacaaaaacattaaattgTGGACTTGGAACCAATAACGCAGTAACTCATTGCAATAATACAGATAAATCTGGGTTGGTTTATACCTGGGTGGCCCCTGCAAAAAATGGCCCTAACAAAGTTGTATTCATGGCTACTGTTGTCAAAATAAGGGTAGAATACTGGATTGAACTCAAATCTTCAGAGCTAACATTAGcTACCACTGGAGCGGCCTTTGGGCTGAAAAGCAGTGCCTTTGTTACTTTGTCACTGTTGTCATTGGGTCTTGTCCATTTTCTCTGATTTTCCCTTCCTGTGTATGGAGTGGATCCCTTCACTTCTCTCTCTAGCCTAGAGGATAAATGTACTCAATTTACAGCTTTAGTTTAGTGAGATAAAGATTCTATCCATGTGTTAAATTCACCTCTTTGATCTAGTTTGTCTACTTCCTAGATAGTTTATGAATATCATTGACAtcacacattttgcacaaaTAACTCCTACACAAGAATGTGTCCAACCCTATGGCATTTTGATTCCCCTCTTCTGTAACGGAGTTGTGGATGTCTTGTGGCAATGTGCAATATTTATTgctataataattaattatatatatatatattttttctatttaaaatgggTTTTAGGAAATgccttcttttaaaaaaaaactaccaatCTTCtaccttttatttaaataattttgatatGGTTTTGCTGCAGCTTTTCTGTATTAATTTGACAGGTACTTccgtatattaatatatatatatatatatatatatatatattagccgCACAAAAGAAGAACTTTATAAAGAAGGAGGAGTGTGTTGTAGATTTAACCTTTTTATAACATTCTTGGAAAACGTATTTTCTTCAATTGTTTGTGTGctatgtcttgttttgtttaacgaCTAGTTTGACAATGCCTCTTGTAAGATGAGTTGGAAAACAGCTATTGTAAATAGGTGAATTGTCTTCATctgtttatttaactttcattaatatttacctaatgttttcatgttggtatgttttcctttgttattcaaaaataaacagtttctcTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014680 True 1560 mRNA 0.36 5 26886487 26890130

Neighbor

gene id symbol gene type direction distance location
AMCG00014682 cdc16,LOC106581643,LOC107673708,LOC107597489 coding upstream 4691 26869226 ~ 26881796 (+)
AMCG00014681 NA coding upstream 20247 26859733 ~ 26866240 (+)
AMCG00014677 LOC107600373,LOC107569583,LOC107690616,LOC107748609,LOC107731761,LOC107681305 coding upstream 257780 26624761 ~ 26628707 (+)
AMCG00014676 itgbl1,LOC107748609,LOC107690616,LOC107681304 coding upstream 298093 26585481 ~ 26588394 (+)
AMCG00014670 NA coding upstream 477396 26389232 ~ 26409091 (+)
AMCG00014684 upf3a coding downstream 602 26890732 ~ 26900814 (+)
AMCG00014685 NA coding downstream 35704 26925834 ~ 26961877 (+)
AMCG00014683 asmtl coding downstream 76615 26966745 ~ 26974382 (+)
AMCG00014690 slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767 coding downstream 87305 26977435 ~ 26980300 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding downstream 431484 27321614 ~ 27337656 (+)
G71859 NA non-coding upstream 654922 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 875487 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 926785 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 1115998 25770209 ~ 25770489 (+)
G71772 NA non-coding upstream 1138079 25745803 ~ 25748408 (+)
G71963 NA non-coding downstream 62166 26952296 ~ 26953253 (+)
G71995 NA non-coding downstream 136645 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 584934 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 1350436 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 1407539 28297669 ~ 28300813 (+)
G71525 NA other upstream 4030841 22855342 ~ 22855646 (+)
G71004 NA other upstream 8612127 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 9399437 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 10417278 16465621 ~ 16469209 (+)
AMCG00014508 NA other upstream 10747455 16129479 ~ 16139032 (+)
AMCG00014687 NA other downstream 14747 26904877 ~ 26911237 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 945373 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 978573 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 1412243 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1906919 28797049 ~ 28837910 (+)

Expression


Co-expression Network