AMCG00014685


Basic Information

Item Value
gene id AMCG00014685
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26925834 ~ 26961877 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014685
ATGAGTAACGCCACTCACAACTTCTCTGCCAACGTGCTGGAGATGATCACCAGTCGGATCCTCACCGAGGCCCTGCCCATCATTTACCTGATGGTCTTCATCGTCAGCACCCCCTGCAATCTCATTTCCCTCTGGCTGCTCTGCTGCCACACGAAACGCAACAACCCGACCATCATATTCGCCATCAATCTGTCCCTGACTGATCTCCTGTACAGCACCTTCCTTCCTTTTCAAATCATCTACCACCTCAGGGGCAATGACTGGCCGTTCGGGCAGAACAAGGAAGCCAGCACCGCCCTCTCTGTCATATATGTCATTGTGATCCTCATCAGCTTCCCAAGcaacagtctctctctctggctgctgCTGTTCCGCACAACCCTGACTCCCTCCACCATCTACATGATCAACCTCACCATCACCGACCTGATCGTTTACCAGCTCAATGGCTACAACTGGATCTTCGGAGAAAATATGTGCAGTGTTGTGACTGTCATGTTCTACTCCAACATGTATTGCTCCATCTTAACCATGACGGCCATCAGCTTGAGCCGGTACATTGGAGTGGTGTGCCCTATGACCTTTGAAAACCATAAGAACCGCTACGCCTTGATGGTGTGTCTAGCGATGTGGGTAGCCATCTTGATTGTTATGTATCCGTTAGAGAGGACTGACTTAACCTACAAAGTGAAGGAGCTGAACATAACTACCTGCTTTGACATCCTTAAAAAAAGCATGCTCCCGTCTATAGGTGCCTGGGCCGCCTTCCTTTTCACCTTGTTTGTCCTCCTCTTCATGATCCCTTTCATCCTGACGGTGTACTGCTACACCAGAGTCATCCTCAAGCTGCTCCACCCCAATCAGCAACAGGTTAGCTCTACACTTTCTACAAAACTTCTTCTGTCACGACGAAATTACAAGAGATCTCTGGTGGAAGATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014685 True 942 mRNA 0.49 5 26925834 26961877

Neighbor

gene id symbol gene type direction distance location
AMCG00014684 upf3a coding upstream 25020 26890732 ~ 26900814 (+)
AMCG00014680 NA coding upstream 35704 26886487 ~ 26890130 (+)
AMCG00014682 cdc16,LOC106581643,LOC107673708,LOC107597489 coding upstream 44038 26869226 ~ 26881796 (+)
AMCG00014681 NA coding upstream 59594 26859733 ~ 26866240 (+)
AMCG00014677 LOC107600373,LOC107569583,LOC107690616,LOC107748609,LOC107731761,LOC107681305 coding upstream 297127 26624761 ~ 26628707 (+)
AMCG00014683 asmtl coding downstream 4868 26966745 ~ 26974382 (+)
AMCG00014690 slc25a6,slc25a5,LOC107597494,LOC108426068,LOC107756767 coding downstream 15558 26977435 ~ 26980300 (+)
AMCG00014691 ppp2r3b,LOC108426065,LOC106581654,LOC100705877 coding downstream 359737 27321614 ~ 27337656 (+)
AMCG00014701 NA coding downstream 521211 27483088 ~ 27491264 (+)
AMCG00014705 NA coding downstream 741207 27703084 ~ 27714268 (+)
G71859 NA non-coding upstream 694269 26231219 ~ 26231565 (+)
G71826 NA non-coding upstream 914834 26010799 ~ 26011000 (+)
G71817 NA non-coding upstream 966132 25952233 ~ 25959702 (+)
G71784 NA non-coding upstream 1155345 25770209 ~ 25770489 (+)
G71772 NA non-coding upstream 1177426 25745803 ~ 25748408 (+)
G71995 NA non-coding downstream 64898 27026775 ~ 27027272 (+)
G72072 NA non-coding downstream 513187 27475064 ~ 27479444 (+)
G72169 NA non-coding downstream 1278689 28240566 ~ 28297484 (+)
G72173 NA non-coding downstream 1335792 28297669 ~ 28300813 (+)
G72208 NA non-coding downstream 1375414 28337291 ~ 28341717 (+)
AMCG00014687 NA other upstream 14597 26904877 ~ 26911237 (+)
G71525 NA other upstream 4070188 22855342 ~ 22855646 (+)
G71004 NA other upstream 8651474 18271854 ~ 18274360 (+)
AMCG00014553 atp1a1,LOC108429865,LOC106919873,LOC103358968,LOC102798469 other upstream 9438784 17364798 ~ 17487050 (+)
AMCG00014525 NA other upstream 10456625 16465621 ~ 16469209 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other downstream 873626 27835503 ~ 27841871 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other downstream 906826 27868703 ~ 27879800 (+)
G72175 LOC102776245 other downstream 1340496 28302373 ~ 28304073 (+)
AMCG00014729 NA other downstream 1835172 28797049 ~ 28837910 (+)
AMCG00014739 NA other downstream 2285998 29247875 ~ 29256354 (+)

Expression


Co-expression Network