AMCG00014696


Basic Information

Item Value
gene id AMCG00014696
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 27441353 ~ 27466854 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014696
GGAATCTCCTGGATTGTCAGGCAGACAGCTCCTGGAGCTAAAAGTATGGAGTCTTGGCTTGGAGTCTTGATCTTTGTATTCCTGGCCCAGAGTTCTTTGGCAGTGGAACGCAATTATTACATTGCAGCAGTTCTAATAGAATGGGATTACTATGGAAATCAGagGGAAGGTGCTACTTACAAGAAGGTGGTGTTCAGGGAGTATGAAGCTGGGTTCCAAATGGCCAAACCCCATCCAGTCTGGTCAGgcCTGTTGGGGCCAACTCTGCACGGAGAAGTGGGGGATGTTATAATCGTCAACTTTAAGAACATGGCTGACCGACCATATACCATTCACCCCCATGGCATAGCATATGGGAAACAGTCAGAGGGATCTCTGTACTTTGACAACACTTCAGTGTTTGAGAAGAAGGATGACGAAGTGCCCCCCGGCTGTGAACACAAGTACACCTGGGAGGTGACCGAGGAGATCACCCCTATGGAAAATGACCCACCATGCCTCACTTACTCCTACTTCTCCCACGCCAACCTGGTGAAGGACTACAACTCGGGGCTGATTGGTGCCATGCTCATTTGCAAGCCAGGGACCCTCAGTAACTCTGGCAGCCAGATTCATTTCGACAAGGAGTACGTTCTGCTCTTTGGTGTCTTTGACGAGAACAAGAGCTGGTACAGGACAGAGAGTGAGGGGGCGGCTGAGCAGATCATGTATACAATCAATGGTTACGTGAATGGGACACTCCCGGATGTGAGCATCTGTGCACACACCCCAGTTAGCTGGCACCTGCTGGGCATGAGCTCGGAGCCTGAGATCTTCGCCATTCACTTCAATGGACAGGTCCTGTGGGAGGCCGGACACAAGGTGTCCTCCATCAACCTCATCACGGCCTCTAGCAGCACGGCCAACATGACCGCCAAGAACCCTGGGCTCTGGAAGCTGTCTTCACAGGTCCACCACCACCTGGAGGCTGGAATGCACGGGTACCTCAGAATAACTACTTGTGAGGGAAAGGAACCCAAATTAACAAGGCTCACAATCAAGGAGGCACGCCAGAGCCAAGTATGGACATATTACATCGCAGCTGAAGAAATCACGTGGGACTATGCACCAAATTTGCCTGAATATAGTGAAAGCACCTTCAAGGAATTCAAGCAGAAATACTTGCAGCCAGGACCCCAGCGAATCGGACAAAAGTACAAAAAGGCGGTTTACGTCCAGTATTCGGATAACACCTTCACAACCAAAGTAGAGGACAAGCAGAGGAAGATGGAGACTGGCATCCTGGGGCCAGTAGTGAGGGCGCAGATCAGAGATGTGATAAAGATTGTGTTCAAGAACAGGGCAAGCCGACCATACAGCATCTACCCACAGGGACTGACGATCAACAAGACTGAGGAGGGAGCCAGTTATCCTGACGATGGCTTAGGTAACCATGACCACGAGGTGAAACCAGGGCAGACGCACACCTACACATGGAAGGTGACCAAGGAGGACGAGCCCACGGACAATGATCCGCGCTGCCTGACCCGGCTTTACCACAGTGCCGTGGACATGAGCCGGGACATAGCCTCCGGCCTCATCGGTCCCCTGCTCATCTGCAAGAGCCAGTCGCTCAACAAGAGGAACGTCCAGCTGAAGGCTGACAAAGAACAAATGGCAGTGATGGCGGTTTTCGATGAGAACAAGAGCTGGTATATCGATGAGAACATCCAGACCTACTGCACTGAGCCCTCTAAGGTCAACAAAGAGGACCCAGAGTTCTATGAGACAAATGTGATGCATTCAATAAATGGTTATGTGTATGACAGTGGACAGTTCCTTGGGTTTTGCCATGGCGAGATAGTAACCTGGCATGTGTTGAGTGTCGGGATACAAGACTATATCCAGACTGCCCACTTTTACGGACATACTTTTGATGTGTACGACAGAAGTGAGGATGTTCTAAACCTCTTTCCGATGATGGGGGAGACCATAGCTATGGACATGGACAATGTTGGACACTGGCTTTTGGCATCTTTAAACTCCCGTCAGAGCAACCAGGGAATGAGGTTAAAATTCAAAGATGTTGAATGCTATAAAGAAGATTACTACTATTCAGATGATGACGAAAAGGAGACAGACATTAGCATGAAAATAGTGTCTGTGTGGTTACCTGAAGACATAGAGATGTTGggaaaggaagaggaagaggatgagACACTCACTAAAAAATCTGCAGGAACCCATGTGGAGGAAGATTATGATCCAGAAACAGAATTTTGGCATTCTCAACTTGGACTTCGGTCTGCCAAAAACAAGTCACAGGGACTTATTCCTGAGGAAGACCTGTTGGATATTTCATCTCTCCTTGGACGCGATTATGAGGGTTCTGCAAGTGGAAAGGGGATAGAAAAACACAATCACTCAATTTCAGCAACACTGCAGAACAATACTAGCTCTGAAATGGACAGCGAGAATCTTCTCTTGACAGAATTGTCTACAGGTGAGATGGGGCTGGTGGAAGAAGACCTTTTGCCAATGGGATCCAGTGAGCAAGGTAGAAATTATTCTAGTGCTGATTCTACAGAAAATTTGTATCTGCATGCTGCAGACATCCAATTGTCCATAGGAGAAACAGAGGGGTCCTTAGAAACTCATCTTAACAATTCAGTTCCCATATCTGAAAGAAACCGCACTATGGAACAGGAAAATGGAGCTGCAATAGTAACACCAGAGAGAAATGTGACTTCAGAAAATCTAGATGCCCAAAACAAGTTGACAATGGAGACATTAGGTCAACCCAACGTggatcttcagtttcttcaaAAGGAGGTCATGAATGAGAGTATATCAGGTACTGAGGCAAGTTGGATAGTGGAAAACAGCACATCAGAAGGGTCCGTGGTGGAACCTACTGATAacaaagtgtttatttactttgttccACCACCTACAACATCCACAAATGACAGCCTTGGAGAAACAGAGAACAATGCTGAATTTGTGTTGCTGGACAGCGGCACAGTGCAAAATGTTTTGGACGACAATGACCATGTGCTGGGAGATGCAGAGCACCAAGCAACCATGCTGGTGGGTGAGTTCCCCTACGAAGTCCACTCTGCAGAAGCCAAGGTTGATGGAGAAGATCAGCACAGTTTTATACCTGCTGCAAGTTCAGATCTGTTAGAGGATACGTTGAACTCCGAAATGACATCATCCAATAACAGTCATGTGGAAGATCAGACTTTCACTGGCCCTGTTGTTGTTGATCATGAGAACAGCAATGTTACTGATTTTACTAATCAGACTCTGGGAGCACATAGTCAAATCAGAGTGGGAAGCCACAGCATTGCTTCTGAACAAAGCTCACCCTCACCTCACCCAGATACAGACATCCATCCAACCAGTGTTCCCACCATAGAGAACCACACAACATCTGAAACACAACCAGATACAGTGGCACTCACCACAGACCCTCCAGGAGCAACTGTGTCACCTGTCGAAATGCACGAGAATATAACTGAGGGATCTCGGTTTGAAAGCCAGGATTCGTCAGAGCAAATCATCTCCGAAAACAGAGAGGACAGTCTCTGGGGAACCACTGGAGTAAATCTGAATATAACAGTGTTTCCTGATACAATGAAAAAGAGCTCTTCTGAGGAGCAGGGCTACAACTCTACAGAAGAAGATTATACAGAAGAGGGGAAAACCAACAATCATACTTCATCACCTATAGTGTCTATCAACTCAACAGAAGCCCCTCAGCCACATGATACAGGCTACAAGAGTCATTCAATTGAGTTGGAATTGTCTCCCAGTGCTGAGGATACCGAGGATGTCTTGATTTACCTGAAAAACATGAGTAAAGAAGCCATTCTTACGACTTCTCTGAATGCATCGAACCAACACTGGGGCTATGATGGAAAACCTCAGACCGTGCCGGAGAAAATCCCACCTCACATGACCAAATACACCAAAGATAAATCAATGACAGATGACAAGCACAACGGGACCAACAAGAAACCCAGAAAGAAGAGGCCTGTGAATAGCAGTGGAGTGAAAATTAAAAGGCGGAAATCTAAACAAGAATCCCGTGTCCTGTCACCAAGAGGTCACAAACCCCCATCCATAGATCCCAGAGGTCACAAGCCAATCACAAATTCAGAGGATTTGACCAAGACAGCCATTGTCATAGGGTTACCACGCAGGGACTTCAATGACTATGAGTTATTCCGGACAGATATACATGACCATGAAATGGACAATGAGGAGGTAGAACAGCTTGGGAACAGCTATGAATATGTGGAGTACAAGGACCCTTATACTTCCAATGCTGGAATGAAAAACATGGATGAGACTGTGAAGTATTTCCTAAAAAATGAGAAGAATGCAAGAACATACTACATAGCTGCAGAAGAGGTGGAATGGGACTATGCTGGCTACAAAGGACAAAGGAGATATGAAGACTCAATCGAAGACAAAAGGAACACCCAGTTTAAGAAAGTGGTTTTCCGCAGCTACCTGGACAGCACCTTCAACACCCCTGCCATTCGTGGAGAAGTGAATGAACACCTTGGGATCCTTGGGCCTGTTTTGAAGGCTGAAGTTAATCAGAATATTATGGTTGTTTTCAAAAATTCAGCCTCCAGACCCTACTCCATGCATGCCCACGGAGTTTCTTATGGGAAACAAATGGAGGGGATGAAGTACAATGATACGTCTCCTCACTGGTATCAGTTTGACGATGCTGTCCAACCAGGGAGCACCTACACATATGTCTGGCGAGCGAGTGCCAAAATGGGGCCACAATCTGGAGATTCAGCCTGCAGGACATGGGTTTACTACTCTGGTGTAAACGCGGAGAAGGACATCAACTCAGGACTGATTGGCCCGCTCCTGATCTGCAGGAAGGGAGTGCTAAACAACTCCACTTTCGACAGCAGGGAGTTTGTCCTGCTCTTCATGACATTTGACGAAAACAAAAGCTGGTACTTTGAGGAATACATGCAGAAAAACCAAAGGACCAGCAGCGTCAGCATGAGTGATGTTGAATTCAGGGAGAGCAACAGGTTTCACTCCATCAACGGCATCATTTTCAGCCTGAAGGGACTCAGGATGTACACCAAACAGTTGGTCAGGTGGCATCTGATTAACATGGGGTCCCCCAAAGACCTGCATACCATTCACTTCCATGGACAAACCTTCCTGAACAAGCAGACGAAGGACTATCGCCTGGGAGTCTACCCACTACTGCCTGGTAGTTATGCTGATATAGAGATGAAGCCCTCGAAACCAGGTCTGTGGCTGCTGGAGTCCGAAGTGGGAGAGTTCCAACAGAGGGGGATGCAGACTCTGTTCCTGGTGTTAGATGAAGACTGTAACCATCCTCTGGGTCTTCAGTCTGAAAGTGTCAAGGACAGACAGATCACAGCTTCTCAGTACACAGGGGATTGGAGGCCCCACCTGGCTCGACTCCATAACACAGGCAAATACAATGCCTGGAGTATTACAGAGGATTCCTCGGCCTGGATTCAGacCTTTGAAGGAAACAAAGATTCATACGGAGTCATGGAGAATATTTTCTTCCCACCTTTAATAGGGCGCTACATTCGCCTGCACCCCACTCAGTCTTATGGCAGGCCCACTTTGCGAATGGAGTTCTATGGCTGTGAGGTGGACGGATGTTCAGTGCCATTAGGCATGAAGAGTGGACAGATTACAAATGATCAGATAACAGCCAGCTCAGTCTACTACGCCTGGTACCATGGCACCTGGCAGCCATGGCTGGCAAGACTGGATAACCAGGGGAATGTCAATGCCTGGCGTACAAAGGCAAACAATGTATTCCAGTGGCTACAGATtgaattaaaggaaataaaaaaaattactggAATCATAACTCAAGGGGCCAAGTATATGAGAAGTGATTTCTATGTAGAAACATATTCCCTACAGTACAGCATGACGGGAACCACATGGACAACCTACACCGATGATTCTGACATTCCAGAAAAGATATTTGTTGGGAACAGCGATAACAATGGCCATGTCAAAAACTACATTTATCCTCCAATTTTTGCCAAATTCATCCGGATCATTCCGAAAACATGGCACAACAGCATCACCCTAAGAGTCGAGTTGCTTGGATGTGACTTTCAATGAGCACCCTGAGAAAATGGCGGCACTAAATATGGGTCATCTACTTGCCTAACCCTTCATAATACTCAACCTAGCCACTCAGTGTTGTATTGTAATAGGAATTATTGTGACCACTTTACAAGAGCCCTGTGAACAACCACACCTGAACAGGTCTcattaatgaaagaaaagtaatttatgAAGTGTAGTAAAGTCCAGTTGaaactgtaatttataaaacaagtGTAAATTTTTATATCAGTTTAACAACCTTGCttgtttcttgttcttgttctgtgTGACATGAATGTCAGCCATTTGTCGCTACCTTTATGAAAGCCGGACTCAACCGCAATCGGTTTTGTACAGATTGACTAAACAGAGGACATTTCTGAGGCGATGAAACTGAGCGAGTAACTGTAGcatgcaatacaaaaacacaaacacttaaaatgtaaatatgtaagtaCTGTGTGCGAggaataaccttttttttaattcaataaatccAGCTTTACAGGTAGGTTGACATTTTGCACTGGTCTTTCCTTATATTTTGTCAACGATTTGACCCATGCAGTTCTATCtcctttattaattttattttaatgtttcagacagacccccccccctcctaTAAAGGCTGAAGGgatgtaaataaaaaagag

Function

GO:

id name namespace
GO:0009617 response to bacterium biological_process
GO:0007155 cell adhesion biological_process
GO:0005507 copper ion binding molecular_function

KEGG:

id description
K03902 F5; coagulation factor V (labile factor)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014696 True 6785 mRNA 0.46 24 27441353 27466854

Neighbor

gene id symbol gene type direction distance location
AMCG00014694 NA coding downstream 424 27431251 ~ 27440929 (-)
AMCG00014695 myh9,LOC103376082,LOC106601336,LOC100380669 coding downstream 19684 27420051 ~ 27421669 (-)
AMCG00014698 NA coding downstream 36434 27397227 ~ 27404919 (-)
AMCG00014699 NA coding downstream 54726 27381186 ~ 27386627 (-)
AMCG00014700 NA coding downstream 63581 27373072 ~ 27377772 (-)
AMCG00014697 atg3,LOC107752093,LOC107659953 coding upstream 3435 27470289 ~ 27482680 (-)
AMCG00014702 ccdc80,LOC107695464,LOC107756780,LOC107673676,LOC107748150 coding upstream 25174 27492028 ~ 27509142 (-)
AMCG00014707 kdm6a coding upstream 251112 27717966 ~ 27762413 (-)
AMCG00014712 NA coding upstream 594774 28061628 ~ 28204961 (-)
AMCG00014713 NA coding upstream 752538 28219392 ~ 28220486 (-)
G72049 NA non-coding downstream 22308 27418816 ~ 27419045 (-)
G71961 NA non-coding downstream 508716 26932268 ~ 26932637 (-)
G71882 NA non-coding downstream 1106353 26334655 ~ 26335000 (-)
G71880 NA non-coding downstream 1117099 26324038 ~ 26324254 (-)
G71879 NA non-coding downstream 1159388 26281374 ~ 26281965 (-)
G72089 NA non-coding upstream 63442 27530296 ~ 27530643 (-)
G72139 NA non-coding upstream 369485 27836339 ~ 27837927 (-)
G72146 NA non-coding upstream 389885 27856739 ~ 27861375 (-)
G72280 NA non-coding upstream 1111555 28578409 ~ 28578734 (-)
G72305 LOC100136012 non-coding upstream 1179641 28646495 ~ 28646811 (-)
AMCG00014692 LOC107756725 other downstream 71826 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 136756 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 5196438 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 8216123 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 8237786 19201803 ~ 19203567 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 862885 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 1922436 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 3374669 30841523 ~ 30846800 (-)
G73047 NA other upstream 4796313 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 4988452 32455306 ~ 32555945 (-)

Expression


Co-expression Network