AMCG00014712


Basic Information

Item Value
gene id AMCG00014712
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28061628 ~ 28204961 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014712
CCTTTAAGCCTGTCAGAAATCCCTTGCCGCCTCTGTCCTGATCCTATTCTGAATGCGGTCCTTGCATGGGTTTACGTGGCCCTGGCCATCATTGGGTTTCTCAGCAACGGCCTGGCGCTGCACGACCTGTGGAGGACAGAGATGACCAACACGGTGATCTTCACCATCAACATCATGGCCTCGGACTTCATGCTGTGCTGCAGCCTCCCGTTCCGGGTCGCCTACTACCTGGAGAGCGCCAACTGGAAACCGGAATCCACCTTGTGCACCATGGCCAAGTTCATGACCATCTCACTCTTCTACATCAACCTGTACTGCAACATGTGCTTCCTACTGTGGACCAGTATTAACCGCTATGCCAGCGTGGTGAGACCCAAGCAGGTCTTTCTGAGAGCCTTCAAGAGGGCCTGGGTGTGCAAGGCTCTGTGCACTCTGACCTGGGTGTGCACAgtgatcatcatcatcaccaccaaCCTGTCCCGCAACATCCAGAAGAGAACCGTGCAGGCGGCGGAGAGCTGCTTCGACCTCATCGTGAATGTGAACCGGCACAAGTACAACTCCACCCACGTGCTGGGGGAATCTGTGTTCTTCCTCATCTTAGTCCTCATGTTGACTTTTTATGCCCTACTGGTCTACCACCTACACCTGGTTAAAAGGAGCAGCCTGGTGGGACGGGCGCAGCGGGGCAGCCTGAAGGTGCGACGGAAGATAGcggtgttgctgctgctgttcatgGTCTGCTTCATGCCCTACCACATTCAGCGCATGATGCTGCTGGCCTCAACTGCTGGAGACAACTGTCAGTGGCAGGAGAAGCAGTACAGGGTGAAAGCGGGCACCATCCTGCTGGCTGCTCTTAGCTGCTGCGTGCATCCCCTGCAGCACCTCGCCCTGCGCTCCCGCTGCTGCAGGCCCAGCGCCGGCACCCACCACAGGAATGCCAACAGCCTCACAGATGCTGGGCAAACTGTGGCCAACGTGCACATAAACAAAAGCCTACATGCCAGTCAAATGGCGAACATATCCCATCAGGCGGGGCACTGCTTCAACACTTCATGCTTGTGTCCATCTCACGCCACCAGGACTGTCCTACCTCTCCTCTATTGCATACTGTTCATCGTAGGACTTGCAGGGAACATCTTGTCTCTGTTCATCTTCTTTAAGAAAATGTCCATCACAACCCCTACTCACTTTTACCTGACAAACCTAGGGGTGTCCAACCTGCTGCTCTGTGCCGTCATGCCCTTCCTGTCACTCTACTATGCACAGGGATACATGTGGCAGAGCGACACACTCATCTGCCAGCTGACAGTGGCCTTCGTGACGCCTGTCATCCACATCAACCTCTACGTCAGCATGTTAATTCTCAGCTGGATCGCCCTCAGCCGCTGCGCAACCCTGATGAGGTACAATGAGCACAACAGTGATGATTTCTGCAATTGCTTCAAAAAGGTCATCCATTCCGGCATCCTGAGCCAGTTTCGGGAGCTGCGCTTTGCCAAAATGCTGTGTTTGGGTATTTGGGTCACTGTGATTGTCGCCATCGTCCCAGTGATGGTCTACTACTCCATCCACGAAGCCCAGTCCGAGTTAAAAAAAGACGTCTGCTACGGCACAAACATAGAAATTGGAGGAGGGACCTCTCAGGTGTCAAGTAAAATCGccagtttcattttcttcctgtgCTTCCTGTTGGTTCTGGTGTCTTATACATCCATCACGAGgcacatttacaaaatgcagaaatCGTCCGCCATTTCAGAGAAACACTGGATTTACAACCGCGTGTTCCGGAAAATTCTGGTCATTCAGGTTGTGCTGGTTGTCTGTTTCCTGCCTCACCACATTTTCAGGGTGATTTTCATAAATCTTGTTGGAATAACCCAAACCTGTGACAGACTTTCACGGTTAGTTGAAGTGAAAAACTACCTGCTTTGCCTTACGGCTTTCAGAAGCAGCACAGACCCTCTCATGTACTTTCTCTTGGACAACAACTTTAAAAGGCACttcaaaaaagtaattaaaagcatCGCAAACAAGACAAGCAGCCAGTCCTCAGTTTCCAATTTGCAAGGTCCACCTTGCATATCCCagacaaaaaacagcaacattaacTTGGGCATCACACTCAAAGAGCTTACAAAATACCTAAGAATGGGCGCCCCTACACTGACTGAAAGCAggcaaagagacagagagataatAGAAGATGTAAGGGTCCTGTATCCAGAATTGTGGCCTGAAGAGCtggacattcagtttggagatAAAGCGccTCTTTCCATTCCCTACACAGTAACAGCACTCGGCAAAGATGAGAGATCAGGGAATACATGGTATGTGCTGAGTCGAAGTAACGCTGAGCAACAGATAAGGCTCCTTGCTAAGGGCAAGGATAGCGATGAGGAAAACAAGGTCGATGATCTGACAGATCTGAGGGAGAAAACAGAGCAAGTCAGCATTTCCAGGGCAAACAGCGGGGCTGGGGTAGAGGCCCTGGAGGACAGGGCCGTGTCAAGCAGCAAAAGCAGGATCGGCCTGGGCTCAGCACTACAGAGGCTGGCAACTTCAATACAGCCTTGTCAAAATGTCAAAACGCTTCCCTCAGCCGAGAACCTTGAAGAGTTCATACCAGCCATGAATAACAAATATCAATGGCTACGAATTGGGGAACGGGAGCCCGGCACTTCGAAACCCACCATGAACCCTCATATGTGGCCTACTGCAAAAGCCACTTTTGGATGCCTGCTTGACCAGAGTATCGATGAGACGGCTATTTATGTCGCCAGCCTTACACTGCCACTATACAACAGCAAACAGAGTGATGGAGTGCGCTCCAAAGAATACTACCAGAGGCCCAGCATGCATTCTGATCAGATGCAGAAAGGGGAGGACTGGGTCACCAGAGATTACTTGGTTGTAGTGTCAGAATCTCTTGATGAAGACAATAAGGAACTCGATTACCAGCCATGTCCAGCACCTGTGTTCCAGCAGCTCGGGATGACTATTGATCACGAGGCCCTGGTCCTGTGGGTAATATCTACACTAAGGACTAAAGAAGAGGTGCTAAATGCTAGTCTCTGTGACGCTCATGATTTGAGCAAGACAGTTTTAATTGCTTGTGGCAGGGTCTCCTCCATGAGCAAACTGGTGCCTGACCTCAGCAGAGGC

Function

GO: NA

KEGG:

id description
K08420 GPR82; G protein-coupled receptor 82

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014712 True 3174 mRNA 0.51 12 28061628 28204961

Neighbor

gene id symbol gene type direction distance location
AMCG00014707 kdm6a coding downstream 299215 27717966 ~ 27762413 (-)
AMCG00014702 ccdc80,LOC107695464,LOC107756780,LOC107673676,LOC107748150 coding downstream 552486 27492028 ~ 27509142 (-)
AMCG00014697 atg3,LOC107752093,LOC107659953 coding downstream 578948 27470289 ~ 27482680 (-)
AMCG00014696 NA coding downstream 594774 27441353 ~ 27466854 (-)
AMCG00014694 NA coding downstream 620699 27431251 ~ 27440929 (-)
AMCG00014713 NA coding upstream 14431 28219392 ~ 28220486 (-)
AMCG00014715 ddx3x,LOC108412429,LOC102776245,LOC107564811 coding upstream 84394 28289355 ~ 28315398 (-)
AMCG00014716 usp9x,LOC108272755,LOC107595873 coding upstream 136190 28341151 ~ 28380053 (-)
AMCG00014717 NA coding upstream 282668 28487629 ~ 28490563 (-)
AMCG00014719 NA coding upstream 289145 28494106 ~ 28494486 (-)
G72146 NA non-coding downstream 200253 27856739 ~ 27861375 (-)
G72139 NA non-coding downstream 223701 27836339 ~ 27837927 (-)
G72089 NA non-coding downstream 530985 27530296 ~ 27530643 (-)
G72049 NA non-coding downstream 642583 27418816 ~ 27419045 (-)
G71961 NA non-coding downstream 1128991 26932268 ~ 26932637 (-)
G72280 NA non-coding upstream 373448 28578409 ~ 28578734 (-)
G72305 LOC100136012 non-coding upstream 441534 28646495 ~ 28646811 (-)
G72306 NA non-coding upstream 450605 28655566 ~ 28655765 (-)
G72307 NA non-coding upstream 453116 28658077 ~ 28658299 (-)
G72317 NA non-coding upstream 469420 28674381 ~ 28766089 (-)
AMCG00014692 LOC107756725 other downstream 692101 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 757031 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 5816713 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 8836398 19217722 ~ 19225230 (-)
AMCG00014604 kctd4,LOC107688678,LOC107748885 other downstream 8858061 19201803 ~ 19203567 (-)
G72236 rpl8,LOC107595836,LOC107748161 other upstream 124778 28329739 ~ 28332482 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 1184329 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 2636562 30841523 ~ 30846800 (-)
G73047 NA other upstream 4058206 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 4250345 32455306 ~ 32555945 (-)

Expression


Co-expression Network