AMCG00014731


Basic Information

Item Value
gene id AMCG00014731
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28995936 ~ 29013055 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014731
GCGGCGCTGGCGGGCAGCGGGATGATGCAGGGCTTGTGTAATTGAAACACAATCTACCGGTTCAGTGAAGGAGCGAGGCATTTCGTGGCGATTTACTGACAAACTGCTTTCTTCTCTCGGCGACAATGAGTGTGACCCAGACTCTCCTGCAGCAGGGCGCCGGGAGAGGGTACCGCCAACAGCGGGTACATGACTACCTGTACGACCCTGTGTATGCTGTCTCCAGCCAGAGAGACCATGCCCGGGCTAACTTCAGGGCCCACGCCTCCCTGGACCGGGTGAAAAGAGTCCCAGAGTATAAATCCATGTTTAGTTCCCTGCCTCATCACCCCCGATACACACTACGCCTGGAGGCTACTGACCCGGTGCCACCCTTTATTGATCGGCGATGGAGAGGCAGAGTAGAGCAGCGAAGGGAGCAACTAGGAAGATGTAATCCATCTGTAAAAGTCCAGGATGGGACACATGTTGATTGTGATATTTCAGGAGCTGATCGCTGGAAGTATTTTAAACGTCCGCTTATACCTTTTTCACAGCAGCTCCCACCTGATGTTGTTTTTGCAATTCCAAAggGAGATGCAACCTCTGAAGGTGCTGCTGTGAGACCTTCCACACCTTTTGCACGTAATGTCGCTGTGCAAACAGACTACAGGGACAGCGAGGCTCAGACTGACCCCTACACCCCTCAGTATGTAACTCGCCCTGGATCGGCCCCAGAGCTTCTAACACTGGCCACCCTAACATGGAGCCGGGGCCTACCAGCTGGCTTGGCAGAGGTGGAGATGATAGAGAGAGCGCGGGCAAAGCGAGCCTGGGAAGCCACCCTCCCGCCACTGGACGATCTTTCCCAGCTGGACAAAAGAAGGAGAATGATGGATGAAATGGAAAGGAAGGAGTGGGCGTTTCGAGAAGGAGAGATAGACAAGCTACAGGAGGCGAGGCTGCAGGTCCTCGTGAAGCTCCTGCAGCAACGCGAGGAGAAGCAGCAGCAGGCTAACGTACGGCGCTTGGACGACCGCTTCTCCCAGCTCCAGCGCACCAAGGGGGCCAAGGTGAAGAAGATGCGCAACGAATACATCAGAGATATCAGGAAGCTTATccagaaaagaaagaatgtaGAGGGAAAACTGGAGAGACGGGACATCATCAAAGAGTTTGCCGACTATGGATCACAAACCTATGCCCCGCTGTCTCGCGGGGGCCTTTCCACAGATCGAGATTCAGAACGTTACGTTGTGAAAAGCACTCTCCTCGATACTTATGAAGGCTTGCTCGAGCTGGAGGCATCTCTGCCAGATTTTGTCACTCAGCCACGCATAAAGGCTCCAAAATCCAAAACCAGCAAAGGGTTTGTGAAGCGGGCTGCCCGACAAGAGGTGGAACTGGCTCAGATACACCAGTCACTGAAAGAGGAGAAAAGGAAGAGTGAGGAGAAGAAGCCCTTGCGTTTTCTGTTCAAGATGGAGAAGCCAGTCCCTCGACCCCCCACTCCAGTTGTGGAAGACCCCCCTGAGggagaagaggagaaagaaCTGGCTGTCATTTACCTTCAGAAATTGTTAAGAGGAAGAGCCATTCAGAATATGATGTTTGAAGGCAAGGAGAAGCGACTGGAGCTCATTCAGGAGTTGCGTACCACCCACGCCCTGCAGAAGGAGGGGCAGCTACTGAAGAAAACCGAAAAACAGGTCACACTGGCTCTGCAGCGCCAAAGAGACTTGCAAAACCACCAGGTTTCCACAGCAGAAAGCTACCTGGCCAGTACTGCTGGAGGTGTCCTGGGAGACATGTTCAGCTACCTTTCCAAGGAGCTGGTCCGTCTGCAAGAGGAACGACGCCTTCACGCCTTCACCATCCTGGCGGAGAGAGACCGGCGAATCAGGGAGGCAGAGGAGAGCGGGCGGAGACAAGTGGAGGAGAGGCGTCGGCGGGAGGAGGACGAAATCTTCAAACAGGTTGTGCAGGTGCACCAGGATACTGTTGATTCATACCTGGAAGATATTATTCTGGCCACACTGGAGAAAACGGCAGATGAACAAGCCAGAGAAGAGATCCACAAGCTCGCTGAAGAGGTTAACAGCATTGCTTATGCCATGGAGGAAACCCGAACTCGGCTGCAGTCCGAAGAAATCGTTGCAGAGTTGGTCTATGGTTTCCTCATCCCAGAGGTTAAGAAACTCACAGTGAAGGACCGAGGTGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014731 True 2204 mRNA 0.53 16 28995936 29013055

Neighbor

gene id symbol gene type direction distance location
AMCG00014730 NA coding downstream 44584 28930365 ~ 28951352 (-)
AMCG00014718 NA coding downstream 500910 28494507 ~ 28495026 (-)
AMCG00014719 NA coding downstream 501450 28494106 ~ 28494486 (-)
AMCG00014717 NA coding downstream 505373 28487629 ~ 28490563 (-)
AMCG00014716 usp9x,LOC108272755,LOC107595873 coding downstream 615883 28341151 ~ 28380053 (-)
AMCG00014732 NA coding upstream 10723 29023778 ~ 29031908 (-)
AMCG00014735 NA coding upstream 338693 29351748 ~ 29383448 (-)
AMCG00014742 sik1,LOC105911651 coding upstream 440987 29454042 ~ 29463876 (-)
AMCG00014744 NA coding upstream 477010 29490065 ~ 29507061 (-)
AMCG00014748 eif5b,LOC107567794 coding upstream 602466 29615521 ~ 29643703 (-)
G72370 NA non-coding downstream 1586 28925630 ~ 28994350 (-)
G72375 NA non-coding downstream 4716 28989465 ~ 28991220 (-)
G72334 NA non-coding downstream 174860 28820820 ~ 28821076 (-)
G72324 NA non-coding downstream 216643 28776227 ~ 28779293 (-)
G72323 lrrc58,LOC102790154 non-coding downstream 220199 28775281 ~ 28775737 (-)
G72414 NA non-coding upstream 133788 29146843 ~ 29147168 (-)
G72423 NA non-coding upstream 175635 29188690 ~ 29189044 (-)
G72438 NA non-coding upstream 204725 29217780 ~ 29218033 (-)
G72472 NA non-coding upstream 337023 29350078 ~ 29351654 (-)
G72495 NA non-coding upstream 408205 29421260 ~ 29423372 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 663454 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 1626409 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 1691339 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 6751021 22225924 ~ 22244915 (-)
AMCG00014603 tpt1,LOC106582181 other downstream 9770706 19217722 ~ 19225230 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other upstream 376235 29389290 ~ 29398305 (-)
AMCG00014775 NA other upstream 1828468 30841523 ~ 30846800 (-)
G73047 NA other upstream 3250112 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 3442251 32455306 ~ 32555945 (-)
G73127 NA other upstream 3584407 32597462 ~ 32619149 (-)

Expression


Co-expression Network