AMCG00014768


Basic Information

Item Value
gene id AMCG00014768
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30728363 ~ 30741144 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014768
TGCTCTTGCCAATGCCCTGCCAACCACAACAAGAAGGTGTTTGCTCATGCAGGGGAGCTAGTACTTCTGAGCTGTAGATCCCATGTGAGTCTGCTGAGTAATGAGACACTCGTCTGGAGTGTGAACTCAACACTGGGCTTCAGGGAGCTGACAGAGAGCCAAAACGTGATGTTTGAGGGAAGAAATCTCATACTGCTCGGTGTCACATTATATGATACTGGACTTTACCAGTGCAGCCTTCGGAATGATACCAGTATCGTGCTTTTGGATCAAGTGAATTTAACAGTGTACAAAGGAGACTGctacacagaaaaatatatccGGAGAGTAGATGAATATGTTGGAAAATCTGTTACTCCGTGTCGTTCAATGAAGGATTGCATTCCATTCTCTACACCAACAATTACCTGGGTGAAGGACTGTAATCAACATAAGGAAGAGTCTGAAAACGTACACATTGACAGTCTTGCAAAAAGCGATGCTGGGAAATATACTTGCATATACACTTATGAATTTGGGGggaaacaatacaatttgtCTGAAACAACATATCTTGTTGTAAATGCGTTTGCCGACACAGTGCTGGAGTACATTGACAAGAGCAGGCGACTGATAATGATACCCAGTACAGACTGCAGGGACGAGAGTCAGTATGAGCTTGTAACAGGTCTGCATAACGCTCTGGTGGACAGGAAAATACAAATCGTCTTTATTGAATATGACTCGGCCACGGATATGGACTTGCTGCAGGAGTCACTCAGGCTTCTTGTAAAGTCAAACAAGATAGTCAAGTGGAAGGGCAGCAAATCCATAGACTATCACTCACCTTTCTGGAAGAAACTCCGCTACATGATGCCAGCAAAGAAACTGCTATCTAGCTCAGAGGAGGAATTAATGCTCTCAGTGCAGCAAAAAAGCATTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014768 True 924 mRNA 0.44 4 30728363 30741144

Neighbor

gene id symbol gene type direction distance location
AMCG00014774 NA coding upstream 17943 30700206 ~ 30710420 (+)
AMCG00014779 NA coding upstream 67768 30659601 ~ 30660595 (+)
AMCG00014772 NA coding upstream 118259 30594129 ~ 30610104 (+)
AMCG00014770 NA coding upstream 179841 30545213 ~ 30548522 (+)
AMCG00014769 stxbp5l coding upstream 196864 30525993 ~ 30531499 (+)
AMCG00014771 NA coding downstream 106028 30847172 ~ 30851142 (+)
AMCG00014781 NA coding downstream 166025 30907169 ~ 30917566 (+)
AMCG00014784 NA coding downstream 282399 31023543 ~ 31027002 (+)
AMCG00014783 NA coding downstream 300747 31041891 ~ 31044741 (+)
AMCG00014787 vangl1,LOC106574540 coding downstream 500157 31241301 ~ 31264255 (+)
G72426 NA non-coding upstream 1536085 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1567938 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 1591010 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 1737064 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 1742787 28981122 ~ 28985576 (+)
G72767 NA non-coding downstream 95692 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 100416 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 105018 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 214761 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 262228 31003372 ~ 31003788 (+)
G72605 NA other upstream 876542 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 881777 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1449214 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1472009 29247875 ~ 29256354 (+)
AMCG00014729 NA other upstream 1890453 28797049 ~ 28837910 (+)
AMCG00014777 NA other downstream 23207 30764351 ~ 30812287 (+)
G72785 fam160a2 other downstream 237072 30978216 ~ 30978825 (+)
G72786 NA other downstream 238426 30979570 ~ 30980252 (+)
G72787 NA other downstream 248919 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 402279 31143423 ~ 31147877 (+)

Expression


Co-expression Network