AMCG00014771


Basic Information

Item Value
gene id AMCG00014771
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30847172 ~ 30851142 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014771
TTCACCAGCCACTTGCTCGTCATGAGACTCCTGTCCCAGGCACTTTGTCTGTGCTTGGCACTGGCCCTGTGCCTAGCTGCTCCCCCACATCATGGTATTGCATCTGACCACCAAGGGCAAAACTCTGGAGACCACCATGGGCAAAACTCTGGAGACCACCATGGGCAAAACTCTGCAGGCCACCATGACAGCCACCATGATGTTGCTCACTTAGGTCGTTGCCAAGGGATAGAGTTTGATGCCATTGCCCCAGATGAGAAAGGCACCATTTACTTCTTTAAGGGAACCCATGCGTGGAAGGGATTTGAGGGCCCAGAGCACAATGTGACTGAGTTCTTCCATGAGTTGGACGACCACCATGCGCTGGACCACATTGATGCTGCTTTCAGATTGCACCGTGATCCTGACACCGCGGACCACAAGCACCACGATGACCACGACCATGACCACATATTCTTATTCCTGGATATTGTCTCACTTCATGACATCAGTGAAACTTTCCATCTCTTCCTGCAGGGTGACAAGGTCTACAGCTACTATAACCACGCATTGGAAGCTGGTTTCCCCAAAGCGATCCACGATGTGTTCAAAGGAATTCCTGATCACCTGGATGCAGCTGTGGAGTGCCCCAAGGGAGAGTGTCAGGGAGACTCTGTCCTCTTTTTCAAAGACTCACATGTGTATCACTTTGACCTGAAAACCCAGATTGTCAAGACGAGAGACTGGTCTCACCTGACCAACTGCACTTCTGCCTTACGCTGGTTGGGCCGCTACTACTGTTTCCATGGCCACCAGTTCACAAAATTCCATCCTGTGACCGGAGAAGTGACTGGAGATTATCCCAAAGACACCCGCAACTACTTCATGCAATGCCCTGGCTTTGGTAAGTGGGAGAGGAACATGGGATCTTTGTAG

Function

GO: NA

KEGG:

id description
K18977 HPX; hemopexin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014771 True 915 mRNA 0.51 6 30847172 30851142

Neighbor

gene id symbol gene type direction distance location
AMCG00014768 NA coding upstream 106028 30728363 ~ 30741144 (+)
AMCG00014774 NA coding upstream 136752 30700206 ~ 30710420 (+)
AMCG00014779 NA coding upstream 186577 30659601 ~ 30660595 (+)
AMCG00014772 NA coding upstream 237068 30594129 ~ 30610104 (+)
AMCG00014770 NA coding upstream 298650 30545213 ~ 30548522 (+)
AMCG00014781 NA coding downstream 56027 30907169 ~ 30917566 (+)
AMCG00014784 NA coding downstream 172401 31023543 ~ 31027002 (+)
AMCG00014783 NA coding downstream 190749 31041891 ~ 31044741 (+)
AMCG00014787 vangl1,LOC106574540 coding downstream 390159 31241301 ~ 31264255 (+)
AMCG00014788 poglut1 coding downstream 446608 31297750 ~ 31308262 (+)
G72769 NA non-coding upstream 751 30846162 ~ 30846421 (+)
G72768 NA non-coding upstream 2502 30841560 ~ 30844670 (+)
G72767 NA non-coding upstream 10003 30836836 ~ 30837169 (+)
G72426 NA non-coding upstream 1654894 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1686747 29157025 ~ 29160425 (+)
G72783 NA non-coding downstream 104763 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 152230 31003372 ~ 31003788 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding downstream 426945 31278087 ~ 31287434 (+)
G72861 NA non-coding downstream 611004 31462146 ~ 31463811 (+)
G72875 LOC103376870 non-coding downstream 673173 31524315 ~ 31592105 (+)
AMCG00014777 NA other upstream 34885 30764351 ~ 30812287 (+)
G72605 NA other upstream 995351 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 1000586 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1568023 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1590818 29247875 ~ 29256354 (+)
G72785 fam160a2 other downstream 127074 30978216 ~ 30978825 (+)
G72786 NA other downstream 128428 30979570 ~ 30980252 (+)
G72787 NA other downstream 138921 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 292281 31143423 ~ 31147877 (+)
AMCG00014793 NA other downstream 661666 31512808 ~ 31523187 (+)

Expression


Co-expression Network