AMCG00014775


Basic Information

Item Value
gene id AMCG00014775
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30841523 ~ 30846800 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014775
ATGGGAAGTCACCTAATCCTGAATGACTTGCTAGTAGACAAGGTGAATAGACTCACCTCTCTGTTACCTACTCTGTTCTCCACAGGTGCCTATTTCCTACGTCTTGACACCAAACGAGATGGCTGGCATGCATGGCCCATTGACAGCCAGTGGAAGGAAGTGCACAGTGATGTGGATGCAGTCTTCTCCTGGGACCACAAATTGTACATAATTAAGCGGGATCAGGTTTACATTTACAAGTCTGATCAGCATTACGTCCTGGTAGAAGGGTACCCCAAATCTGTGGAAGAAGAGCTGCACGTGAAGGGACATGTGGATGCGGCTTTTGTATGTCCAGGTACACACGTGGTGCACATCATTCAAGGTGAGTTAAATATGGGAAGCAAGATGATTGACGTGGACCTGACAGCAAGTCCTCGGGCCGCGAGTAAAGAATGGCCTCTGCCATACAAACACATCGATGCGGCCAAGTGTGGGCCTGAGGGAGTACGGATCCTTGTCGGAGCAGAGTACTTTGATTACGGGAGTCCAATGCTGCTGGCTACTGGGAGAATCAAGCCAATACCCCATAGTATAGCTGACATGCTGGGATGCCACCACTAA
>TU90943
CAGTTTGTGCAGTTATATATGTAGACAGTGCTATGGTGAGCTGTAGCACCAGTGAAGCTGTGTGATAGCATTGCATGAAGAAACAGAATCCAAAGTGAAAGGAATATTAGAAAGTCTATTTCTAAGTGGTAAACTTGCCAATGTTTTATGATGGTCTGCATTAGACAAGGTGAATAGACTCACCTCTCTGTTACCTACTCTGTTCTCCACAGGTGCCTATTTCCTACGTCTTGACACCAAACGAGATGGCTGGCATGCATGGCCCATTGACAGCCAGTGGAAGGAAGTGCACAGTGATGTGGATGCAGTCTTCTCCTGGGACCACAAATTGTACATAATTAAGCGGGATCAGGTTTACATTTACAAGTCTGATCAGCATTACGTCCTGGTAGAAGGGTACCCCAAATCTGTGGAAGAAGAGCTGCACGTGAAGGGACATGTGGATGCGGCTTTTGTATGTCCAGGTACACACGTGGTGCACATCATTCAAGGAAGCAAGATGATTGACGTGGACCTGACAGCAAGTCCTCGGGCCGCGAGTAAAGAATGGCCTCTGCCATACAAACACATCGATGCGGCCAAGTGTGGGCCTGAGGGAGTACGGATCCTTGTCGGAGCAGAGTACTTTGATTACGGGAGTCCAATGCTGCTGGCTACTGGGAGAATCAAGCCAATACCCCATAGTATAGCTGACATGCTGGGATGCCACCACTAAAATGCAGAGTCAGGAAGCCCGAGGTGTAGCAGTGAACACAAGAGTAAGCTGACTGAATCTCCCCTCACAGGCACTTATGCACCCTCCCATCTCCATGCTGCTGAAACAGAGTTACATTTCTTCCAGGTAGCAAAGCTTTGGTTTTCATACCATTATATTCCAATGTCTCTGTCCAAGGGCATACAGTTATGACATCACTGTGCTAACTGAGGCTAACTGTTCCCTACTGCCTACTCTCACCAGGACTCACCTCCTCTCTTGAAAGAGCACCTTTCTCAGCAGACTGGTGGCCACAGTGAACTAATTTGTCACCTTGTATCTCTGTTTTGTATTCCTGCATGAAGGAGCTTTACTAGATTACATGGTTGGGGGCTCACCAAAAACACTTGGTGTCATCTGCTTAGGGGTTAGCCCTACATCACCTCTCTACTGCACTGTAAAAACCTCGTTTCCAATAATAAAACTAGTACAAAGCAAGTctgattggttttgttttcatgtatttgccTGTCGTTCCCC
>TU90944
ttcgccttcatagtgattgtctgcggattgtcctgcacaccattcgcaaaatgacagcctgaaacaccggccagctgttcatacaatattaataacatcggctgctacgatccgattattatccttcagtttattttaactagtcacggcactgcaccggtcctgtgaaatccaagtgtttaatgcactcggatattaactgtaagaagtcattgtttctgtacatggatttcactccatgctgctaataaaacagtaatttcttcgtgatcgcacacggcacttgagattatatcttccgaGGTGCCTATTTCCTACGTCTTGACACCAAACGAGATGGCTGGCATGCATGGCCCATTGACAGCCAGTGGAAGGAAGTGCACAGTGATGTGGATGCAGTCTTCTCCTGGGACCACAAATTGTACATAATTAAGCGGGATCAGGTTTACATTTACAAGTCTGATCAGCATTACGTCCTGGTAGAAGGGTACCCCAAATCTGTGGAAGAAGAGCTGCACGTGAAGGGACATGTGGATGCGGCTTTTGTATGTCCAGGTACACACGTGGTGCACATCATTCAAGGAAGCAAGATGATTGACGTGGACCTGACAGCAAGTCCTCGGGCCGCGAGTAAAGAATGGCCTCTGCCATACAAACACATCGATGCGGCCAAGTGTGGGCCTGAGGGAGTACGGATCCTTGTCGGAGCAGAGTACTTTGATTACGGGAGTCCAATGCTGCTGGCTACTGGGAGAATCAAGCCAATACCCCATAGTATAGCTGACATGCTGGGATGCCACCACTAAAATGCAGAGTCAGGAAGCCCGAGGTGTAGCAGTGAACACAAGAGTAAGCTGACTGAATCTCCCCTCACAGGCACTTATGCACCCTCCCATCTCCATGCTGCTGAAACAGAGTTACATTTCTTCCAGGTAGCAAAGCTTTGGTTTTCATACCATTATATTCCAATGTCTCTGTCCAAGGGCATACAGTTATGACATCACTGTGCTAACTGAGGCTAACTGTTCCCTACTGCCTACTCTCACCAGGACTCACCTCCTCTCTTGAAAGAGCACCTTTCTCAGCAGACTGGTGGCCACAGTGAACTAATTTGTCACCTTGTATCTCTGTTTTGTATTCCTGCATGAAGGAGCTTTACTAGATTACATGGTTGGGGGCTCACCAAAAACACTTGGTGTCATCTGCTTAGGGGTTAGCCCTACATCACCTCTCTACTGCACTGTAAAAACCTCGTTTCCAATAATAAAACTAGTACAAAGCAAGTctgattggttttgttttcatgtatttgccTGTCGTTCCCC

Function

GO:

id name namespace
GO:0004806 triglyceride lipase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014775 False 603 mRNA 0.49 4 30842042 30846800
TU90943 False 1234 lncRNA 0.46 3 30841523 30844128
TU90944 True 1325 lncRNA 0.46 4 30841523 30844948

Neighbor

gene id symbol gene type direction distance location
AMCG00014780 NA coding downstream 78462 30759157 ~ 30763061 (-)
AMCG00014766 NA coding downstream 146198 30689042 ~ 30695325 (-)
AMCG00014765 NA coding downstream 152486 30668526 ~ 30689037 (-)
AMCG00014764 NA coding downstream 195184 30630436 ~ 30646339 (-)
AMCG00014763 NA coding downstream 214176 30620505 ~ 30627347 (-)
AMCG00014782 NA coding upstream 75555 30922355 ~ 30925207 (-)
AMCG00014785 NA coding upstream 105671 30952471 ~ 30979877 (-)
AMCG00014791 LOC106574540 coding upstream 414916 31261716 ~ 31279130 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding upstream 432514 31279314 ~ 31292735 (-)
AMCG00014789 NA coding upstream 490313 31337113 ~ 31345430 (-)
G72693 NA non-coding downstream 446185 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 579919 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 630127 30211142 ~ 30211396 (-)
G72659 NA non-coding downstream 674597 30166717 ~ 30166926 (-)
G72646 NA non-coding downstream 786350 30054340 ~ 30055173 (-)
G72790 NA non-coding upstream 99290 30946090 ~ 30947343 (-)
G72791 NA non-coding upstream 103310 30950110 ~ 30951375 (-)
G72862 NA non-coding upstream 615379 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 619692 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 634048 31480848 ~ 31485466 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1443218 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2509041 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3471996 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3536926 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 8596608 22225924 ~ 22244915 (-)
G73047 NA other upstream 1416367 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1608506 32455306 ~ 32555945 (-)
G73127 NA other upstream 1750662 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1948205 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 2223449 33070249 ~ 33119328 (-)

Expression


Co-expression Network