AMCG00014779


Basic Information

Item Value
gene id AMCG00014779
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30659601 ~ 30660595 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014779
ATGATGCGGTGGcagtttaaaatggaaaaaattgtCTACTCCCAGGACTCCCTTTACAGCTACCAATTAGCTACATCCAAACAGAGAGGGGTGTCTCCATTTTATACTTACACTAATGCTGACATTAAAGAGATGGCCCATCATGTTCATGCATACTTTAAGATTGCCTCTGACCGCCTGGCCAACCAGATTCCGCTGATACTGCAATACCACATGGTGCAGCAGTACATCAGCAATGTACAGACCTCCGTGCTGGAGCTGATTGGGGAAAGGGAAGACACCAATGTGGAGCAACTGCTACGGGAGAATGGAGAAATCGCCCAAGAAAGGCATGCCTTGCAGTGTAGTATGGAACGGCTGAGAAAAGCCCAGCAACACCTGGCTAAGTTTGTAGTTAACTTATAA

Function

GO:

id name namespace
GO:0009615 response to virus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014779 True 405 mRNA 0.46 2 30659601 30660595

Neighbor

gene id symbol gene type direction distance location
AMCG00014772 NA coding upstream 49497 30594129 ~ 30610104 (+)
AMCG00014770 NA coding upstream 111079 30545213 ~ 30548522 (+)
AMCG00014769 stxbp5l coding upstream 128102 30525993 ~ 30531499 (+)
AMCG00014767 NA coding upstream 409335 30241706 ~ 30250266 (+)
AMCG00014776 NA coding upstream 447770 30197763 ~ 30211831 (+)
AMCG00014774 NA coding downstream 39611 30700206 ~ 30710420 (+)
AMCG00014768 NA coding downstream 67768 30728363 ~ 30741144 (+)
AMCG00014771 NA coding downstream 186577 30847172 ~ 30851142 (+)
AMCG00014781 NA coding downstream 246574 30907169 ~ 30917566 (+)
AMCG00014784 NA coding downstream 362948 31023543 ~ 31027002 (+)
G72426 NA non-coding upstream 1467323 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1499176 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 1522248 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 1668302 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 1674025 28981122 ~ 28985576 (+)
G72767 NA non-coding downstream 176241 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 180965 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 185567 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 295310 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 342777 31003372 ~ 31003788 (+)
G72605 NA other upstream 807780 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 813015 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1380452 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1403247 29247875 ~ 29256354 (+)
AMCG00014729 NA other upstream 1821691 28797049 ~ 28837910 (+)
AMCG00014777 NA other downstream 103756 30764351 ~ 30812287 (+)
G72785 fam160a2 other downstream 317621 30978216 ~ 30978825 (+)
G72786 NA other downstream 318975 30979570 ~ 30980252 (+)
G72787 NA other downstream 329468 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 482828 31143423 ~ 31147877 (+)

Expression


Co-expression Network