AMCG00014798


Basic Information

Item Value
gene id AMCG00014798
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31727286 ~ 31741350 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014798
TCTTGATCATGTTGGGCTGACCTGACTACAATGGACCCAGAGGAAGTGGAGCTGCTGAATGACTACCGCTACAGGAGCTACTCCTCCGTCATCGAGAAGGCGCTGAGGAACTTCGAATCCTCCACAGAATGGGCTGACCTCATCTCTTCGCTGGGCAAGCTCAACAAGGCTTTGCAGAGTAACCTGAAGTACTCCCTGCTCCCAAAGCGCCTCATCATTGGCAAGCGCTTGGCCCAGTGTCTCCATCCTGCCCTGCCCAGCGGGGTCCACTTGAAAGCCCTTGAGACCTATGAAGTAATTTTCAAGATAATTGGCACCAAATGGCTGGCCAAGGACTTGTTCCTTTACAGCTCTGGGCTGTTCCCCTTGTTGGGCCATGCATCCATGTCTGTGAAGCCGGCTCTGTTGACCCTGTATGAGAGATACTACCTCCCGCTGCAGAAGTCCCTGCTCCCCAGCCTACAGGCCTTCGTTACTGGGCTGCTGCCTGGACTGGAGGAGGGCTTGGAGGTCTATGACAGGACTGACGCCCTCCTCTTGAAGCTGTCCCTCCTGGTTGGTCAGAAGGTGTTCTACAGCGCTCTGTGGGGCAGCGTCCTGATCAGTCCTGCGATCCGCCTCCCGGCCTCCCTCTTTATCGTCAATCACTTCAACAAAGCCGAGTCGGGCAAGAAGCAGAACTACATGCTGGGATCAGACCACAAACTGGTGATGAAATCCATTGGTTTATCGCTGCAGGACTCCAATGTCCTTGTGCAGAGAAACATGCTGGAAATCCTACTTTACTTCTTCCCTTTCTATACATGTTTGgaaCCTGAAGAAAGGAGTATTCCAATAAACCACAACGAGATGGTCAATATTGTCTCGGCGGCGTCGCTCACACTCCTGAGAAGAGACATGTCCCTAAACAGAAGACTGTATGCATGGCTTTTAGGTACAGACATTAAAGGGGGTATTTTAGCCCCGGATCCTCACATGTCCACCTCTGTTGAGGACCATGCTGCATTTTACTTTGAGAAATACTCCAGGGGGCTTCTGGTTCAGGCTTTGATCAGCATCCTGAAGCAGAAGCACATGGAGCCCGAAGTGGATAACGTACACTCTTACCTGAAGCCCTTCCGAATCCTGATCAGCCTACTGGACAAGCCAGAAATAGGTCCACAGATCATGGGAGACCTTCTCTTGGAAGCCATAAGGGCCTTGTATGGCTACTGCAAAGACATGCTGGGTAAAGACCTACTTCTCAGCTCCAGCCATGGTGGGAACCAGCTGGCCAGcataattaaagaaaacaagaacGCCTCTGAAATCATCAAGACCGTGAACATGCTGATCAATTCCCTCAGTAGCGACTACCTGTGGGACTACATGACACGTTGCTTTGAAGCCTGCCTCAGCATGGGAATGTCTGAGGACCAGACCACAACTATGGTGAACAACAAGAGCCCCTCCGTCTCCGAGTTGTGCACTCTCATCATGTTCCTTCTGGACGTCATTCCCCTGGAACTTTACTCTGAGATCCAGACGCAGTACCTGCCCCAGATGTTGAACAATATGCTCCAGGCTCTTCATGAGCACATCGCTGAGCTCAGCCTGCTGGAGCTGACACAGGGCCTCAGGGCCTGCTTCAAAGTTCTCAGCAAGATCCAGATGCCCGTGGCCTACATGGACCTGGAGTCGGAGCCACACGACCTGGGAGAGAAGGAGCCTGTAGAGGCCAAGGAGAGTCCAAAGGAGGAGGAGCtgaaggaggaagaagaggagcaGGACCAGGAAACGATGGAGTTGACCAGGGAAGCGGAGCCTGATGGGGAGGTGGCTGTGGTGGTGCCGCTGCCCCCCCTGCGCTCGGAGGACAGCGGACTGGGCCTCAGCACCTCCCCCTCAGAGCAGTTCCGGAGCAgtcgcagcagcagcagtggtgcAGGCGGGGGGGTCTGTCCCGAGAAAGATGACGTGTGGAGGAAGGGTGGCAGTGTCCAGAACATGGCCCGCTGCGTCCAGGACATTTTAGCGGTCTTCATTGGCAGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014798 True 2034 mRNA 0.54 13 31727286 31741350

Neighbor

gene id symbol gene type direction distance location
AMCG00014801 NA coding upstream 17767 31707248 ~ 31709519 (+)
AMCG00014800 NA coding upstream 31113 31681531 ~ 31696173 (+)
AMCG00014792 NA coding upstream 396611 31312973 ~ 31330675 (+)
AMCG00014788 poglut1 coding upstream 419024 31297750 ~ 31308262 (+)
AMCG00014787 vangl1,LOC106574540 coding upstream 463031 31241301 ~ 31264255 (+)
AMCG00014804 NA coding downstream 11926 31753276 ~ 31763835 (+)
AMCG00014805 NA coding downstream 22830 31764180 ~ 31765038 (+)
AMCG00014803 NA coding downstream 24714 31766064 ~ 31769661 (+)
AMCG00014802 NA coding downstream 61580 31802930 ~ 31825314 (+)
AMCG00014807 NA coding downstream 123781 31865131 ~ 31890448 (+)
G72912 NA non-coding upstream 23713 31703146 ~ 31703573 (+)
G72911 NA non-coding upstream 24851 31702162 ~ 31702435 (+)
G72875 LOC103376870 non-coding upstream 135181 31524315 ~ 31592105 (+)
G72861 NA non-coding upstream 263475 31462146 ~ 31463811 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding upstream 439852 31278087 ~ 31287434 (+)
G72926 NA non-coding downstream 4173 31745523 ~ 31746900 (+)
G73017 NA non-coding downstream 224572 31965922 ~ 31966189 (+)
G73018 NA non-coding downstream 226006 31967356 ~ 31969205 (+)
G73019 NA non-coding downstream 230635 31971985 ~ 31995538 (+)
G73045 NA non-coding downstream 514659 32256009 ~ 32256776 (+)
AMCG00014793 NA other upstream 204099 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 579409 31143423 ~ 31147877 (+)
G72787 NA other upstream 730923 30990063 ~ 30996363 (+)
G72786 NA other upstream 747034 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 748461 30978216 ~ 30978825 (+)
AMCG00014799 NA other downstream 49551 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 198203 31939553 ~ 31962971 (+)
G73103 NA other downstream 801160 32542510 ~ 32561489 (+)
G73244 NA other downstream 1623405 33364755 ~ 33366100 (+)
G73292 LOC100846954 other downstream 2497584 34238934 ~ 34239400 (+)

Expression


Co-expression Network