AMCG00014799


Basic Information

Item Value
gene id AMCG00014799
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31790901 ~ 31798463 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014799
CGTAAAGTCTTTCTGACCTCAAAGGCTCTAACTATGCTGGACAGGTTGATCAAACACAATCTGAATGAGAAGGAGGAGCTGTTGACTTCTCTGGAGGAGATGCAGAAGGAAAATGAGAACAATGGCTTGCCAGTAATCACAAGCTACTACTCTCTGGCTCCTAAAAGGGGGAAATACATATCCATTATGGCCCCAGAAAGCTCTAAAAGTAAGAAGGCCAAGGAAGATGACACCCACAATGCTGTGGAGTGCCTAGATGCCACACCCTGCTCCTCCAACTCCACTGATTCTCCTCCCAGACCGCACTGCTCCTCCATGGCATCCCAGACTGAGGTCAGAAGCCCCATTAAGCAGGAGAGTCTTTCTGAGAGAAAACTTATTTGCCAGATGCAGGATTTAAAGATGACATTTCAGGAGCTGACAGAAATGAGGAGAGTGCAATTTCAGATGCTAGAGAAGAACAAGCCAGATGCAGGCAGGTCCCAGGCTGCAGGGTCCCTATCAGATGTGGGCCGCAGAGAGGCTGAAAAACCGCAGGAGTTGTTGCAGGAGGTGGAAAAGCAGTGGAAAGTCCTTGAAGCtgcaaaaaaacacttcaaagcaACAATGACCAACTGGACCAGCTAGATTCAGCAGCAGTTACAAGAGAGGCTGTAAAATCTCTGTCTGAGCATTGGGAATCTGCTGGACTTGGAACAAGTGAACGATGAGAGTGATAAAATTGATAATGTACTGAATCAAGTCTTGAAACACATCTAAACGGTGCAGTCACAGCCTCTTGTAGGTTTTGGAAatcaaaaaacatgtattcctGTTTTGAGAGAATCATCTTTTATCCATTTTGATGTGCTTCGGATTTGTTGGTTGTCTCTAGGTTTGTAACAAGAGCTAGTTGCTACAGATCCACGAGGAAGAATGAGCAGCTCTCCACACTTGAGATCATATCAAATTTTATACTGTtcctattttttatatttggtaGTGCTGATGTTTTCGATTTACTTACCTGTATTTTAGagttttataaacattttatagttTTCTGTCCTTAGGTTTTGTTAATGGCAAAAttcttgatatatatttttacatacatgtctcagtgtgtcagtgactgGCTGTCTGTTTAGATAAATTACC
>TU91158
TATTTGTAATGCGTTTAATAATCAACCTCATCTAACTTGTCTTTCCCCACAGCGTAAAGTCTTTCTGACCTCAAAGGCTCTAACTATGCTGGACAGGTTGATCAAACACAATCTGAATGAGAAGGAGGAGCTGTTGACTTCTCTGGAGGAGATGCAGAAGGAAAATGAGGCAATGGAAGCTGAACTAAAAACTGCCCGATGGAAGCTGTACGTCTCCTTAAAAAAGATGCACGGTGGCCACAGCAGTGGCAGCTGATTGGTCTTTGTCTGGACCGGGAGCACGtcaattttgtattatgtttttttttttttttctcatttgatacattcatttgagactataacttcaataattcagtcatatacaactaatcatGACAGTTGACTGCGGCAactgtaggctacttaaaatgGGTTAAAAATTAAAGCTTGTATGTCATGTGAACTGTGGGTCCAATTTCTGATGTTCAGATGTTTTAATAACATCTGAACATCaggaatcaaacccacaatGCTGGGCTCACATGACATACAAGCTTTAATTAGAAACCTGGTTTAAGTAGCCTATAGCTGCCGCAGCTaactgtcctgattagttgtaCATGACTGCATTTTTTAAGATATAGTCTCACATGAATTGATGAAttaaggaaaaaacattttaataaataataaaaagtgtatgtgtgtgtgtgtgtgtatattatatttatacctATATATGTAGGTATACGTGTTCTATGGGTCTACAATAAGTAATAGCACTCATGATTACAAATGCTCAAGGGGAGAACATATGATGGGGGTGAACTGTTGTGGGGACAAATTGTTATTGGGGAATTGTGGTGTTGGGGAATAGCTACAGGGATCAACTGTAAGGGACCCGACCAGCTGtgtgttaattaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014799 True 1140 mRNA 0.42 5 31790953 31798463
TU91158 False 908 lncRNA 0.38 3 31790901 31792354

Neighbor

gene id symbol gene type direction distance location
AMCG00014803 NA coding upstream 21240 31766064 ~ 31769661 (+)
AMCG00014805 NA coding upstream 25863 31764180 ~ 31765038 (+)
AMCG00014804 NA coding upstream 27066 31753276 ~ 31763835 (+)
AMCG00014798 NA coding upstream 49551 31727286 ~ 31741350 (+)
AMCG00014801 NA coding upstream 81382 31707248 ~ 31709519 (+)
AMCG00014802 NA coding downstream 4467 31802930 ~ 31825314 (+)
AMCG00014807 NA coding downstream 66668 31865131 ~ 31890448 (+)
AMCG00014808 LOC107579096 coding downstream 98477 31896940 ~ 31915838 (+)
AMCG00014810 NA coding downstream 214721 32013184 ~ 32014391 (+)
AMCG00014812 NA coding downstream 444491 32242954 ~ 32255291 (+)
G72926 NA non-coding upstream 44001 31745523 ~ 31746900 (+)
G72912 NA non-coding upstream 87328 31703146 ~ 31703573 (+)
G72911 NA non-coding upstream 88466 31702162 ~ 31702435 (+)
G72875 LOC103376870 non-coding upstream 198796 31524315 ~ 31592105 (+)
G72861 NA non-coding upstream 327090 31462146 ~ 31463811 (+)
G73017 NA non-coding downstream 167459 31965922 ~ 31966189 (+)
G73018 NA non-coding downstream 168893 31967356 ~ 31969205 (+)
G73019 NA non-coding downstream 173522 31971985 ~ 31995538 (+)
G73045 NA non-coding downstream 457546 32256009 ~ 32256776 (+)
G73105 NA non-coding downstream 759818 32558281 ~ 32564339 (+)
G72925 NA other upstream 35971 31717118 ~ 31754930 (+)
AMCG00014793 NA other upstream 267714 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 643024 31143423 ~ 31147877 (+)
G72787 NA other upstream 794538 30990063 ~ 30996363 (+)
G72786 NA other upstream 810649 30979570 ~ 30980252 (+)
AMCG00014811 NA other downstream 141090 31939553 ~ 31962971 (+)
G73103 NA other downstream 744047 32542510 ~ 32561489 (+)
G73244 NA other downstream 1566292 33364755 ~ 33366100 (+)
G73292 LOC100846954 other downstream 2440471 34238934 ~ 34239400 (+)
G73329 NA other downstream 2981659 34780122 ~ 34780590 (+)

Expression


Co-expression Network