AMCG00014814


Basic Information

Item Value
gene id AMCG00014814
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32321974 ~ 32322759 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014814
atggaggagaagaggagacagagggagcaggaggagaATCCCCCTGGGGCTGGGGAGAAGGAGTACCTAGAAGAGAAGGTGGAGGACTCGGCCAAGGATGAATCGGGCAAGATTAAGCTGAAGGGGGCTTTGCTACAGACATATGTGTTCAGTATCCTCATTCGGACTATCATTGAGGTGACTTTCATCGTTGGCCAGTACCTTATATATGGCATTTTCCTCAAGGCCCTCTACACCTGCCAGAACTGGCCGTGTCCTCACAAAGTAAACTGTTACATGTCCAGGCCAACTGAGAAGAACATATTCATCATCTTCATGTTGGTGGTGGCGTGTGTCTCACTCTTCCTCAGCATTTTAGAGCTTTTCCATCTGGGCTGGAAGAATTTCAAACAGTGCCTGAGGGTCTACGCCGCCGCCCACATCTCTGACACCTCCGGCGCTGCTGCCTCATCCAAAGAGACTGAGCTCCCGCCCAAGGCAACACTCCCCTGCACGCCCCCTCCAGAATTTAGTCAGTGCGTGGAGGCCCCAGACTCCCGCTGCAACCCTTTCAACAACAAAATGGCTCTCCAGCAGAACTCTGCCAACATGGCCACAGAGCGCCATCGCAGCCGGGACAACCTTGGAGGGGAAGACTTCCTCCAAATGAGCTACACACAAGGGAGCGAAACCTCCAACACTTCGGTGCCCCCTCCCTTGCACGACAGCTTCTTCAAGGACAAACGCAGGCTAAGTAAAACCAGCGGATCCAGCAACAGGATCAGAACAGATGACTTGGCAGTTTAA

Function

GO:

id name namespace
GO:0005248 voltage-gated sodium channel activity molecular_function
GO:0005272 sodium channel activity molecular_function
GO:0015081 sodium ion transmembrane transporter activity molecular_function

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014814 True 786 mRNA 0.53 1 32321974 32322759

Neighbor

gene id symbol gene type direction distance location
AMCG00014813 NA coding downstream 36038 32270685 ~ 32285936 (-)
AMCG00014809 NA coding downstream 352751 31967444 ~ 31969223 (-)
AMCG00014806 NA coding downstream 532237 31769573 ~ 31789737 (-)
AMCG00014797 NA coding downstream 614452 31700627 ~ 31707522 (-)
AMCG00014795 LOC107746280 coding downstream 701597 31594391 ~ 31620377 (-)
AMCG00014820 NA coding upstream 306073 32628832 ~ 32641932 (-)
AMCG00014819 NA coding upstream 324775 32647534 ~ 32648995 (-)
AMCG00014818 NA coding upstream 327417 32650176 ~ 32653420 (-)
AMCG00014823 slc10a2 coding upstream 469122 32791881 ~ 32793425 (-)
AMCG00014826 NA coding upstream 804919 33127678 ~ 33434382 (-)
G73049 NA non-coding downstream 56550 32265132 ~ 32265424 (-)
G73046 NA non-coding downstream 65199 32256155 ~ 32256775 (-)
G73005 NA non-coding downstream 423029 31896940 ~ 31898945 (-)
G72919 NA non-coding downstream 623962 31697655 ~ 31698012 (-)
G72874 NA non-coding downstream 802042 31515430 ~ 31519932 (-)
G73066 NA non-coding upstream 34943 32357702 ~ 32362393 (-)
G73082 NA non-coding upstream 107838 32430597 ~ 32430951 (-)
G73106 NA non-coding upstream 127663 32450422 ~ 32466416 (-)
G73112 NA non-coding upstream 200479 32523238 ~ 32523802 (-)
G73117 NA non-coding upstream 246912 32569671 ~ 32574686 (-)
G73047 NA other downstream 58547 32263167 ~ 32263427 (-)
AMCG00014775 NA other downstream 1475174 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 2923669 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 3989492 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 4952447 27335695 ~ 27369527 (-)
AMCG00014816 NA other upstream 132547 32455306 ~ 32555945 (-)
G73127 NA other upstream 274703 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 472246 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 747490 33070249 ~ 33119328 (-)
G73328 LOC101154678 other upstream 2446824 34769583 ~ 34769979 (-)

Expression


Co-expression Network