AMCG00014818


Basic Information

Item Value
gene id AMCG00014818
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32650176 ~ 32653420 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014818
GGTTCCCCAACCTGCGAGGCTCCTATTGCAAAAATGTTGATGTGGCTCTAATACCCCAAATCAGTAGGTTATAGACAAGATTAAAATGCCCATAATGCCGGGGTTTGTTATGATGGCCGTGCTGTACCTCTCCAGCTTCGCtcagggggaggagggggagcggCTGCCGAATAAATGCGAAGGGAGACGCGTCTGGCTGAAGCTGTTGACAACATCTGCGAGGGGATACTGCAGTACAGCGTACACGCCGAGAGGCCGGGCAGCCTCCGATACGCCAAGgGCACAAGTGAGACTATGGCAACGCTGAAGAACCTGGTGAATAAGGGGGTGAAGGTGGAGCTGGGCCTCCCCTACGAGCTGTGGGATGAGCCATCTGTGGAGGTCTCCGACATGAAGAAGCAGTGTGAGACCATGCTGGAGCAGTATGAAGACTTGGTGGAGACATGGTATTTCCACCATCAGGACCAACacTGCCTGAAGGAAGTGTGGAAAGGCGACATGGGgaagaagggagagggggagaagaagAGGATAGGGACAATGACTGTGAGCGAAGAGGGGGTGATagtggagaaggaggagggcaTGAGCGAGGGAGAAGTGGAGACAGTGGGAGGCGCAGCTGGTGGCAGCCCACATGATGCTGGTGAACTCTGAGGTGGATGGTTGGTTGGATGGCCGGACGAACGGACAGAGCTTTAGACTTTGTTTTCGAGTAAGATCCGAGGAACGGGAGAGTGGACTGGGCATGGTCCCCATGTCTGCAGAAACCTGGCTACTGGGACAGGACAGTCCAGGCTCTGGTTATTATAGTCCATGTAAAGATTCTGCTGCAGTCACATTTATAGAAAGTGTCAGGAATCAGTCAATTGACATCAatacaatcaatatatttaacttACAGGCAATAATGTATAGGTCAAGGACAGTATAGGTCACTACAGGCcattacagtgcaatacaccgcagtacagcacagtatagtgTAGTCCACTcaagtacagtgcagtatagtgtaattcaattaattaagtaCATTATATCGAAGTATTAAACAGATGAGTGCAGTTGAGAGTAGTACAGTCCAGTACACTATTTCGCAGTGCAGTGCAAGGACATATTCTCAATTGAGCTGCTTTTCAGCCCTGCTACAGTGCAGCAGACAGTATAAACCAAATCCCCCACGATCCAGCGCCAGTGACCCACCTGGACCAGCCGCTCCCCTGCAGACTATGCTTCAGCAGTGGCTTCAGATGCATCTTCTCTTCTATGTGTTTACACAAACTCCTGTCGAGCCTGGTGCCCCGCCGCCTTGCCTCCTTGGGCCACCCCGATTCTCAGGCTGGCCGTATTTTATTACTGTGTAGGGTTTCGGAAGGTTTTGTCTGCTCTGCGCTTCCAGGTGTGTTGGGAGGGGGCTGGTGGCGGGGTGGTGGGAGGCTGTTGTGAAGGGGGAGCCTTGATTACAATGTTCCTAACAGTATTGATGGGATTgaacagatacagacacactcagCATTGCACAGTCCTGACTCTGCCCAGTCACAGACAACACAGTTCCTGTACAATACAACTCCGCAAATGGCACTGTCACAGCACAGACTTGGGGGTGGGGAACACCGTACAGTTGCCATGTCGGCACACCTATCGAACACCTTGAAACCTTTTTTACAGGCTGCTGTCCCAACACTTGGTTATGCAACTCggctcattttgtatttttatttcttttgtatttttttttgtcttgttataaacttttaataaataaacaaattaaactaaaa

Function

GO: NA

KEGG:

id description
K22816 CNPY3_4; protein canopy 3/4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014818 True 1787 mRNA 0.50 5 32650176 32653420

Neighbor

gene id symbol gene type direction distance location
AMCG00014819 NA coding downstream 1181 32647534 ~ 32648995 (-)
AMCG00014820 NA coding downstream 8244 32628832 ~ 32641932 (-)
AMCG00014814 NA coding downstream 327417 32321974 ~ 32322759 (-)
AMCG00014813 NA coding downstream 364240 32270685 ~ 32285936 (-)
AMCG00014809 NA coding downstream 680953 31967444 ~ 31969223 (-)
AMCG00014823 slc10a2 coding upstream 138461 32791881 ~ 32793425 (-)
AMCG00014826 NA coding upstream 474258 33127678 ~ 33434382 (-)
AMCG00014828 NA coding upstream 1911066 34564486 ~ 34565202 (-)
AMCG00014829 efnb2a coding upstream 2257173 34910593 ~ 34931646 (-)
AMCG00014830 arglu1,LOC106586866 coding upstream 2289555 34942975 ~ 34960249 (-)
G73132 NA non-coding downstream 19655 32628529 ~ 32630521 (-)
G73117 NA non-coding downstream 75490 32569671 ~ 32574686 (-)
G73112 NA non-coding downstream 126374 32523238 ~ 32523802 (-)
G73106 NA non-coding downstream 183760 32450422 ~ 32466416 (-)
G73082 NA non-coding downstream 219225 32430597 ~ 32430951 (-)
G73181 NA non-coding upstream 54593 32708013 ~ 32708283 (-)
G73182 NA non-coding upstream 56424 32709844 ~ 32710115 (-)
G73183 NA non-coding upstream 57377 32710797 ~ 32711045 (-)
G73184 NA non-coding upstream 57827 32711247 ~ 32711703 (-)
G73187 NA non-coding upstream 135603 32789023 ~ 32790398 (-)
G73127 NA other downstream 31027 32597462 ~ 32619149 (-)
AMCG00014816 NA other downstream 94231 32455306 ~ 32555945 (-)
G73047 NA other downstream 386749 32263167 ~ 32263427 (-)
AMCG00014775 NA other downstream 1803376 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 3251871 29389290 ~ 29398305 (-)
AMCG00014824 NA other upstream 141585 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 416829 33070249 ~ 33119328 (-)
G73328 LOC101154678 other upstream 2116163 34769583 ~ 34769979 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 2927206 35580626 ~ 35608677 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other upstream 3447938 36101358 ~ 36182351 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC110532969 NA coding NC_048573.1 CM023227.2 20166595 ~ 20173950 (+)