G67789


Basic Information

Item Value
gene id G67789
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1840165 ~ 1842445 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84650
CCAGGACTGTgcagctgccccccccgccTCCCTACCCCGGCTACAACCGCAAATAGCCTGGGCCTGGGGACCAAGGAGATCCCTGGCCCTGAGGCCCCTCCACTGAGGGAGATGGAGAATTGGAAATGAGACGGACAGAGGCGGACGGACGGAGAGACCCCCGCACCCAGCAGCGCCCCACAGCACAGCGCAGGAGACCCAGTGGAGCCAGGGGGCCTGGGACCGTGACCTCACTGCCATAGTGTCCAAACCCTCACCGTGCCTACCTGCTGCTGTGCCCGACAGGGGGGCGCCCTGTTCCAGCCGAGCCCTGAACGATTGGAGACACAATTAAGCCAAAATTGTTTCATTGGAcctttttaattactgttggcttttaggtggttggaggcggggcggggcggggcggaACTCAGTTAAGTGCCCGAGAGCTGAGCTGGCACAACAACGAAAACAAAGACTACTCCAAGGAAGACGCCCAGCTCCTGCAGGCGAGGCCGTGCCGTGCTGCGTGTCTGGGGCGGGTGAGGCCTCTGCTCTCACCACATGCTGCAGGGATGGGGGGTGGTGTCCTGTGTCCTGACCTGGCCCAGCAGAGCGAGGTGTGAGCCCCAGCCCCCCGGCCCCGCGCTGGCAGGCTGTGCTCAGTAAGCCTCTTACCCCTAATCCTGGCGCGGGAGGCTTCTCGCATTCCTGCAGGCTCATTTCTGCCTTATTTATTCTTCTTTCCCGTGCATTTTACGCCCCCCCGGGCCCTGCTCAGCAGGGACAGCAGCCTTGCCCCCCCATTCCCCTGCCCCGAGCGCAGGGCAGGCGACGCGGTGACTGTGACTCTGACGCTCCGACGGCATCAACACAGGAATCAGCGCTGCAGTGACTGAGCGGCCTGCCAAGAGCCTGGGTGGAGAAGGAAatggtttttgtgtttgtttgattgtttgtttgccaTGTTTGATCGCTGGGTCCCTTATCGAATGCGGTGCTTTGTAGTTGATTAAAGAAACTGTTCCTTGATTGGAGAATGGGCGTGGTCTGGCCCTGACTACATGGGCAGTCAGTGCGTGACGCTCTCTCCCCAGGCAGAGACCCCCCCGCGCTGGGACACACCGTCACACACTGGGATAAGCGGTTTTGTTGGTTTccactgtatttgtattattgctctgattgtgattttctttctgAGATGCAATGGACTGcagatttttaatataaatctttAAAGCTC

Function

GO: NA

KEGG:

id description
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU84650 True 1228 lncRNA 0.59 2 1840165 1842445

Neighbor

gene id symbol gene type direction distance location
AMCG00014101 NA coding upstream 6805 1825855 ~ 1833360 (+)
AMCG00014100 NA coding upstream 26867 1799682 ~ 1813298 (+)
AMCG00014095 NA coding upstream 275591 1545327 ~ 1564574 (+)
AMCG00014096 NA coding upstream 294940 1541410 ~ 1545225 (+)
AMCG00014089 NA coding upstream 406557 1412350 ~ 1433608 (+)
AMCG00014102 app coding downstream 16233 1858678 ~ 1869442 (+)
AMCG00014103 NA coding downstream 30304 1872749 ~ 1878960 (+)
AMCG00014106 NA coding downstream 78894 1921339 ~ 1925062 (+)
AMCG00014112 NA coding downstream 166157 2008602 ~ 2022266 (+)
AMCG00014113 NA coding downstream 182153 2024598 ~ 2028511 (+)
G67792 NA non-coding upstream 18407 1820573 ~ 1821758 (+)
G67699 NA non-coding upstream 563949 1275991 ~ 1276216 (+)
G67698 NA non-coding upstream 589851 1250099 ~ 1250314 (+)
G67690 NA non-coding upstream 817352 981839 ~ 1022813 (+)
G67685 NA non-coding upstream 1035419 804537 ~ 804746 (+)
G67882 NA non-coding downstream 234858 2077303 ~ 2077602 (+)
G67899 NA non-coding downstream 306004 2148449 ~ 2148654 (+)
G67907 NA non-coding downstream 491046 2333491 ~ 2333944 (+)
G67908 NA non-coding downstream 507684 2350129 ~ 2373305 (+)
G67983 NA non-coding downstream 903799 2746244 ~ 2755484 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 2040 1835432 ~ 1838125 (+)
AMCG00014099 NA other upstream 342561 1479919 ~ 1497604 (+)
AMCG00014061 NA other upstream 1593163 136864 ~ 247002 (+)
G67577 NA other upstream 1733043 58449 ~ 107122 (+)
G67801 NA other downstream 36646 1879091 ~ 1881041 (+)
AMCG00014111 NA other downstream 57775 1900220 ~ 1902687 (+)
G67896 NA other downstream 284427 2126872 ~ 2130145 (+)
AMCG00014146 NA other downstream 864395 2706840 ~ 2710329 (+)
AMCG00014196 NA other downstream 2285031 4127476 ~ 4131718 (+)

Expression


Co-expression Network