G67843


Basic Information

Item Value
gene id G67843
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1916727 ~ 1918182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84738
CGACGCTGCATCCAACCCCCCCTGCCTCGGCAGGCCGTTCTCCTTCACCATCGTCAGGCCGGGCACCCCCTCTGGCTCAGtgtccccccccacctcactcTCACTGCTCACCTCCTCACTGCCTCCTGCCGCCTCCTCCCCTGCCTCTCCCTTGCCCTGTCCTTCTTCTGCTACTTCTATCTCTTCCTCAGCCTCtacctctccctgtccctcagCTTCTTCCTCTACCTCTCCTTCAGCCTTTTCCACTCCACTCCCCTTTCTCactccctctgtctctttctctccctctgcctcatTTTCTCCTTCTCCATCATCCTCagtcttcccctctccctctgcctcgGTCTCTACCAGTGCCTCTTCCTCTGACTTGGTGTCTCCCTTTGACTCTccctcgttctctctctctccctctgcctcagtctctccctctgtctctctctctccctctgcttcggtctctcccactcccactccctctgcctctgcccCAGTCTCTCccttggtctctctctctcccgctgcctctccctcctcctctctccactCCGGCTGCTGCTTTTCCTCCTCAGACTTCACCTCctctccacccccacccccctggcAGGGCTCCGGAGAGGCAGCCTGCTCCCCATTAGCCTCCTGCCCCACTGCGGATACAGCACCTTCTTCCACctttccctctccttcctcctctccctctgccgactgctctttctcctcctcttcctcctcctctgcttcctcccctccctctgtctgtcctgactgctctttctcctcctcttcctcctcctctgcttcctcctctccctctgtctgtcctgactgctctttctcctcctcttcctcctcctctgcttcctcctctccctctgtctgtcctgactgctctttctcctcctcttcctcctcctctgcttcctcctctccctctgtctgtcctgactgctctttctcctcctcttcctcctcctctgcttcctcctctccctctgtctgtcctgactgctctttctcctcctctgccgcctcccctcctctctctccctctccctccgcTCCCTCTTCCCCGTTGGCTGTTCCGATGCCCTCGGCGGGGGTGTCCGCCACTTCGTCCTCCTGCCCCGGGCTGGGACTCTCCTCCTGCTCGCCCTCTGCGCCTTTCCCTGCTCCCGGGCCGCCCTGCTCTGGGCTGGGGTCTCCGGCGCGGGGGATCAGGTCTCCGTTGGGCAGCTCCAGGTCGGGCGTCGGGCCGGCCACCACAGGCTGCACCAGGGCCATGCTGTCAGGAGTGCGGCAGATCGGAAGCGTGAGAGAGCTGGACCGGGTGTGTGGGCAGCCGCGAgtcgctctgtctgtctgtccgtctgtctccGCTGGCTGACTGGCTGTCTGGCTGACCGTCTGCTGCTCCAGCTGTATCCCTGTGGACACTGTGCCTGTCTctccc

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU84738 True 1456 TUCP 0.63 1 1916727 1918182

Neighbor

gene id symbol gene type direction distance location
AMCG00014110 NA coding downstream 1137 1906150 ~ 1915590 (-)
AMCG00014107 NA coding downstream 12994 1903416 ~ 1903733 (-)
AMCG00014109 NA coding downstream 17818 1895665 ~ 1898909 (-)
AMCG00014097 NA coding downstream 378522 1537057 ~ 1538205 (-)
AMCG00014090 NA coding downstream 462110 1453775 ~ 1454617 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding upstream 111408 2029590 ~ 2031527 (-)
AMCG00014117 NA coding upstream 114059 2032241 ~ 2032429 (-)
AMCG00014114 son,LOC107709257,LOC107698212 coding upstream 114530 2032712 ~ 2037821 (-)
AMCG00014116 NA coding upstream 120288 2038470 ~ 2046247 (-)
AMCG00014118 NA coding upstream 233703 2151885 ~ 2154746 (-)
G67818 NA non-coding downstream 94968 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 818748 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 1045100 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1414942 500007 ~ 501785 (-)
G67646 NA non-coding downstream 1529786 386733 ~ 386941 (-)
G67849 NA non-coding upstream 23845 1942027 ~ 1942420 (-)
G67881 NA non-coding upstream 138667 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 431943 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 690087 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 778626 2696808 ~ 2701159 (-)
G67832 NA other downstream 14112 1900640 ~ 1902615 (-)
G67835 NA other downstream 24174 1892063 ~ 1892553 (-)
AMCG00014108 NA other downstream 31295 1879203 ~ 1885432 (-)
AMCG00014105 gabpa,LOC106586689 other downstream 43305 1869850 ~ 1873422 (-)
G67824 LOC103352860 other downstream 53034 1859542 ~ 1863693 (-)
AMCG00014119 NA other upstream 167759 2085941 ~ 2124953 (-)
AMCG00014134 NA other upstream 613772 2531954 ~ 2542697 (-)
AMCG00014144 NA other upstream 722877 2641059 ~ 2653247 (-)
G68088 NA other upstream 907380 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 1467575 3385757 ~ 3394754 (-)

Expression


Co-expression Network