G67994


Basic Information

Item Value
gene id G67994
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2782339 ~ 2802044 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84933
TGATAATAAAGGCTTTGTGACTCAGTCGGGTGTGAtctgttgtttttacaaaagtTAAGGCAGCCCTCATCCCTCCTCTGTGGTGTGTGTCTCCTGTCGAACATTTCCAATAGAAACTGAGTTTAAAGGCTTCCAGAACAGAAGACAGGAGGCACATCTTCTCAGTCTAGTACTTTATTACTATCAACGTTGCTGCACTGGGGAACCAATGGACATGGGGGGTCATGTTTAGAGTCTTTACTTCCTGAACTCTCTGacctgattaaatcaaaccttCTCTACATTCAGCTCCACTGAAGACAGGCCTTTATGTGCACTGAGCCTCCAGCACTGGCCAGTGAAAATACACAGAGACGAATACTTGAAAGGTTTGTTTGGGAGATTTTAAACTCTGTAAAACATGATCTATTTCAGTGGGAGTTGTTTTCACGTCAAACAGATCATTTCCCAGAAAAGGTCACCttaaacatttctgaaagatCAATTTATCGCAGAGACTGTGGTGtcaacatatttaataaacaaatcccCTAAATGACTATGTATAATTCATATagtgaagaaaacacaaaaccaaacacataCAACCATGAGAATATGTGCAGAATATCGTATAACCTCAACACCAGTGACAAACATTCACCTACTCAAATGGCCAAAACACGAGTTCACAATCTGTTTAAGTATTAAGTGATTAATTAGTTTCaataaaaaaggacattttaaataattcaaacatcAGGCAGCACAGTAAGCAATTCTGGTGTTCGTGCACTTTTAGCTGTGATCACCTGATGACCCActgatttcctttctttttctggtatgttaatttctttaagtTTGCTCACCTTaggtccctttttcaggacacatTCAGGAAGCacatattttaaactgaaatcatGAATCCATACATTGCACAttgtgtttttacatattttatactaTTTCTATATTATCACCTGAAATGATTACATCGCTTATTACAGGTGACCAATGAGTTGGGTTCACACAGTAAGTAATTGTGATATTATCCAGCAACTCAACTGAACTAAAATGGGAGAATTTGTTGAAAATCTCTACAGAAAAATCCATGGGAgaacaaatcaatttaaaatgaactgttAAAATATGACTTACAGCTTCCCATTCTAATTGTTTCCTCCAAAGGGTTCTAGCATTGATATTTGAAAGACTGCATTCAATAAGtgtaacattttcttaaaaaaaaaaccttaagcACAAACTatgtgcacacatttgtttacatcccaATTAGTGAATATTTCTCCTTtaccaagataatccatccacctaaCAGCTGTGGCACATCAAGAAGCTGATGAAAcggcatgatcattacacaggtgcggCTTGTGctgggacaataaaaggccgcTCCAAAACGTGTAGTTTTGTCATACAACACAATGCCATGTGTCTCCAGTGTTGAGGCAGTGTGTGATTTGCTACcaactgcaggaatgtccaccagagctgccgTCGGGTCCAGACCCTGGTGTGGATGAGCCGctgatgagcttccctgagacgctttctgacagtttgtgcagtgACTGGTTGTGTAGACCCACAATGTCAGCTGACTGGGCAGCTGGTCTCAGATGATCCTGCAGCTGAAGGAGCcggatgtggagtcctgggctggcgTGGGACACGTGTCTGCGGTTGTGAAGTTGGTTGGATGTGCTGCCAAATTCTCTACAATGTCATTGGAGGCAGTTTGTAGTAGAGATATTAACCTgcaatccatagattagggcctaatttatttatttcaattgactaaTTTCTTTACATAAACTAACTCTGTAAAATCGTTGAAACTGTTGCATGTTGCCCACCCCAGAGGGCTAACAGTGCACCTACACCCCAAGGTGTGacgagccatcgccacccaagggctgttgatgttGACGTTCACGTTCCACACCCGAGGACCGGTGAGAGGCCctcaccagagggaagaccacagccagcagcaccaccTGAGAACTTTCTCatcttcttgctgctgtaacataATTCTACTGCTTGGAGGGgcggcaaccattaggcctgggtcttaagccgtggacccccagagatacattttcttctaaaacagcctgccatccataggagtttattctctcctctgtgcctcatggtttatttcatgttggtatattttatatttgtttactttattttagtttaaagtgttaaaggtttatttatttgatttatgtttatcaatctgtaaagtgctctatggctaccctgtgaagggtgctatacaaataaaaatggattgattgttGAGTTTATATTTCTGTTAAGTGTATAAACCGTTAAGATCTCATCTTAGTACAACCATAGCAATAATAAAAACGCATTTCAACTTCAGTTCTACTCAACATCTTGATTCTGATTTCTCttcttttagtttaatttatccaagtcttttccttcttcttgtGCTGCagtgacaaaacaaacatggtCAGTCTTCCCTAAATTAAGGCCCAGTAACACAATACTCACACAGTACACACTTAGGAGTTGTGCTGTCAAAGGGAGGCAATGATACTAAAATATTGCTGCCTATTGAGAAATACACTACAGAGGGCTACTGGGGGACTGTTCAGTAAAGACCACTACATTACCCTGGTTATTGTCAGATCCTGTCAGAGGAACACCCTCATCTCTGGCTCCACCTTGACCATACTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84933 True 2739 lncRNA 0.40 2 2782339 2802044

Neighbor

gene id symbol gene type direction distance location
AMCG00014147 NA coding upstream 3743 2775378 ~ 2778596 (+)
AMCG00014126 NA coding upstream 221162 2558599 ~ 2561177 (+)
AMCG00014130 NA coding upstream 225771 2549354 ~ 2556568 (+)
AMCG00014128 NA coding upstream 239941 2539703 ~ 2542398 (+)
AMCG00014137 NA coding upstream 285192 2486625 ~ 2497147 (+)
AMCG00014149 NA coding downstream 17498 2819542 ~ 2821456 (+)
AMCG00014161 NA coding downstream 107385 2909429 ~ 2915164 (+)
AMCG00014152 NA coding downstream 121356 2923400 ~ 2928310 (+)
AMCG00014163 NA coding downstream 194401 2996445 ~ 3030703 (+)
AMCG00014162 nhs,LOC103378685 coding downstream 242294 3044338 ~ 3044745 (+)
G67988 NA non-coding upstream 13502 2767502 ~ 2768837 (+)
G67983 NA non-coding upstream 26855 2746244 ~ 2755484 (+)
G67908 NA non-coding upstream 409034 2350129 ~ 2373305 (+)
G67907 NA non-coding upstream 448395 2333491 ~ 2333944 (+)
G67899 NA non-coding upstream 633685 2148449 ~ 2148654 (+)
G68046 NA non-coding downstream 174170 2976214 ~ 2976510 (+)
G68151 NA non-coding downstream 422530 3224574 ~ 3226499 (+)
G68153 NA non-coding downstream 424815 3226859 ~ 3228126 (+)
G68166 NA non-coding downstream 572793 3374837 ~ 3375148 (+)
G68167 NA non-coding downstream 573541 3375585 ~ 3375789 (+)
AMCG00014146 NA other upstream 72010 2706840 ~ 2710329 (+)
G67896 NA other upstream 652194 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 879652 1900220 ~ 1902687 (+)
G67801 NA other upstream 901298 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 944214 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 1325432 4127476 ~ 4131718 (+)
G68475 NA other downstream 1847156 4649200 ~ 4651964 (+)
G68830 NA other downstream 4544151 7346195 ~ 7349467 (+)
G68848 NA other downstream 4611596 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4662459 7464503 ~ 7482560 (+)

Expression


Co-expression Network